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The map label for this gene is glyQ

Identifier: 88608155

GI number: 88608155

Start: 674421

End: 675338

Strand: Reverse

Name: glyQ

Synonym: NSE_0757

Alternate gene names: 88608155

Gene position: 675338-674421 (Counterclockwise)

Preceding gene: 88608084

Following gene: 88608720

Centisome position: 78.62

GC content: 41.29

Gene sequence:

>918_bases
TTGAATGTCTCCTTACCTTTGGTTTATACTGATCTCTTGGTACTTGGGCTTGTGATGTCCATAAGTAGTTTCTGCAGTCT
TATAAAAAAATTGGAAGAGTACTGGAGCGGATATGGTTGTTCTGTCTTGCTTCCCTATACGAGTGAGCTGGGTGCTGCGA
CTCTGCATCCTGCAACAATCTTTTCTTCTATTTCAGCTAAGGATGTAAAAATTGCTTATGTTCAACCCGTAATACGTCCG
GCCGATGGGAGATATGGAAAGAACCCGAATAGATTATATCAACACCACCAGTACCAGGTGCTTATAAAACCTTCCCCAGA
TAATTTACAGGACCTTTATCTAGATAGCCTAAAACACGTCGGAATCGACATACGTAATCATGACATACGTTTCGTTGAAG
ATGATTGGGAAAATCCAAGTGTAGGTGCATGGGGTATGGGTTGGGAAGTCTGGTGTGATGGAATGGAAATTTCGCAGTTT
ACATACATGCAGCAAGTCGGTGGGATTGCACTGAGTAGTATCCCTGGAGAACTGGCCTACGGTTTGGAGAGGATTGCAAT
GTATATGCAAGATGTTGACAACGTAGGAAGCCTATTTTATTCCAAAGATACTGTAAAGTATATGCAAGTCTATGGCGAGA
ATGAGCGTCAATTTTCTATTGCATCCCTAGAATCCTATGACTATGAGCTCCTATTGAGTCAATTCAACGATAATGTTGCC
CAAGCAAAAATTTTTATAGAGAGAAAATTGCCACTTGCTGCATATGACCATTGCATTAAGACAAGCCATATATTGAATCT
TATCGATTCTAGGGGTTTCATAAGCGTCAGTGAACGAGCTAAGTACATCTTGGACATCAGGGGCTTGGTGAAGCAATGTT
GTGAGCTTTTTATAGAGCAGGAGGGGTCTTATGCATAA

Upstream 100 bases:

>100_bases
TGTCAATGGATCTGCTAGAGCAAGCTTGTATGCGTATAGTGAAGGCATTTAAAGCGCTTAGATGAAGATCATCCACTGTC
GATTTCCAAAAGTAAGATAA

Downstream 100 bases:

>100_bases
GTTTCTTCTAGAAATTTTGTCTGAAGAAATGCCTGTCGCTCTGCAAAGTTATGCGCAGAAAAGTTTTTTTGACCTTTTTT
CATCTGCCACTAAGGACCTA

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MNVSLPLVYTDLLVLGLVMSISSFCSLIKKLEEYWSGYGCSVLLPYTSELGAATLHPATIFSSISAKDVKIAYVQPVIRP
ADGRYGKNPNRLYQHHQYQVLIKPSPDNLQDLYLDSLKHVGIDIRNHDIRFVEDDWENPSVGAWGMGWEVWCDGMEISQF
TYMQQVGGIALSSIPGELAYGLERIAMYMQDVDNVGSLFYSKDTVKYMQVYGENERQFSIASLESYDYELLLSQFNDNVA
QAKIFIERKLPLAAYDHCIKTSHILNLIDSRGFISVSERAKYILDIRGLVKQCCELFIEQEGSYA

Sequences:

>Translated_305_residues
MNVSLPLVYTDLLVLGLVMSISSFCSLIKKLEEYWSGYGCSVLLPYTSELGAATLHPATIFSSISAKDVKIAYVQPVIRP
ADGRYGKNPNRLYQHHQYQVLIKPSPDNLQDLYLDSLKHVGIDIRNHDIRFVEDDWENPSVGAWGMGWEVWCDGMEISQF
TYMQQVGGIALSSIPGELAYGLERIAMYMQDVDNVGSLFYSKDTVKYMQVYGENERQFSIASLESYDYELLLSQFNDNVA
QAKIFIERKLPLAAYDHCIKTSHILNLIDSRGFISVSERAKYILDIRGLVKQCCELFIEQEGSYA
>Mature_305_residues
MNVSLPLVYTDLLVLGLVMSISSFCSLIKKLEEYWSGYGCSVLLPYTSELGAATLHPATIFSSISAKDVKIAYVQPVIRP
ADGRYGKNPNRLYQHHQYQVLIKPSPDNLQDLYLDSLKHVGIDIRNHDIRFVEDDWENPSVGAWGMGWEVWCDGMEISQF
TYMQQVGGIALSSIPGELAYGLERIAMYMQDVDNVGSLFYSKDTVKYMQVYGENERQFSIASLESYDYELLLSQFNDNVA
QAKIFIERKLPLAAYDHCIKTSHILNLIDSRGFISVSERAKYILDIRGLVKQCCELFIEQEGSYA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=280, Percent_Identity=48.9285714285714, Blast_Score=288, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 34609; Mature: 34609

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSLPLVYTDLLVLGLVMSISSFCSLIKKLEEYWSGYGCSVLLPYTSELGAATLHPATI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHH
FSSISAKDVKIAYVQPVIRPADGRYGKNPNRLYQHHQYQVLIKPSPDNLQDLYLDSLKHV
HHCCCCCCEEEEEECCEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHC
GIDIRNHDIRFVEDDWENPSVGAWGMGWEVWCDGMEISQFTYMQQVGGIALSSIPGELAY
CCEEECCCEEEEECCCCCCCCCCCCCCHHHEECCCHHHHHHHHHHHCCEEHHCCCHHHHH
GLERIAMYMQDVDNVGSLFYSKDTVKYMQVYGENERQFSIASLESYDYELLLSQFNDNVA
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHCCCHH
QAKIFIERKLPLAAYDHCIKTSHILNLIDSRGFISVSERAKYILDIRGLVKQCCELFIEQ
HEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHC
EGSYA
CCCCC
>Mature Secondary Structure
MNVSLPLVYTDLLVLGLVMSISSFCSLIKKLEEYWSGYGCSVLLPYTSELGAATLHPATI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHH
FSSISAKDVKIAYVQPVIRPADGRYGKNPNRLYQHHQYQVLIKPSPDNLQDLYLDSLKHV
HHCCCCCCEEEEEECCEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHC
GIDIRNHDIRFVEDDWENPSVGAWGMGWEVWCDGMEISQFTYMQQVGGIALSSIPGELAY
CCEEECCCEEEEECCCCCCCCCCCCCCHHHEECCCHHHHHHHHHHHCCEEHHCCCHHHHH
GLERIAMYMQDVDNVGSLFYSKDTVKYMQVYGENERQFSIASLESYDYELLLSQFNDNVA
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHCCCHH
QAKIFIERKLPLAAYDHCIKTSHILNLIDSRGFISVSERAKYILDIRGLVKQCCELFIEQ
HEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHC
EGSYA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA