Click here to switch to the map view.

The map label for this gene is 88608092

Identifier: 88608092

GI number: 88608092

Start: 431551

End: 433134

Strand: Direct

Name: 88608092

Synonym: NSE_0511

Alternate gene names: NA

Gene position: 431551-433134 (Clockwise)

Preceding gene: 88608852

Following gene: 88608504

Centisome position: 50.24

GC content: 42.49

Gene sequence:

>1584_bases
ATGCAAGGACAAGAGAATCGACTCATAAGTTATCTTATACATGGGGGCTGTAAGTATCAGTTATCACAAAAAGGAAATGA
ATTAACCTTAGAAATCGAAAACTCATATGGTAAAAAAGCTAGTGTAAGTGTAAGTGGGGTTGATTGTTCAAATTTTACAC
CAAGACTTGATCCACTCTCCAAAAGTAATACAGCTCAAGTTGTACTGTCATTTAAAAGTATTGGTGGAAAGTATAAGAGC
GTAGTTTATTCATATAATAGTGGGCAAGGTTCATTGACAGAGCAGGGTCCTGGGTATACGCACCCAGGACAGCTATTAAG
TATCAATGGTTGTGGTCCAGTAAACCGTGAAAAAGTCTGTGCAGTATATAATGAATCTGGCAGCACAAAAGTTCAGGTCC
TTTCTGTCAATAGCGACACAGGTGCCATTATAACTTCTGTCGCCCCAAAGATAATAAATGGCTTGGATAAGAACGTAGCA
GCGATTTCTGCAACAGAGGGAGGAGGGCAGCGCATTGTAGTACTTGCAAAGGATGGCACTGGTTTAAAAACAGGTGGTTC
TACAGGAAATAGTATTACTATGTCCCCATTCACACCCACTGGTGGATTAAGTGGAGAGAAAGTAGACAAAATTCTTCTCA
ATGCGTGTAAAGATAGCAGAGTTTGCGCAGTAGTAACTTCTCTAAAAGGAGAAGTATATTATTTGAAGTCCAACGGTGAT
AGCATTAGTACCACCTCAACCAAGATTGCGAGCTATACAGGTGATAGTACAAGCCTGAGTGTAGATCCAGAATATGGTGC
TGGTAGTACTGTAAGCAAGTTTAATGTATTTGTAACAGGGAACGGAGGTAGCGTCACAAAGGCTAGCTTCGAGGTTATTG
GAAATCAATGTGAGAAAAGTAATAGTGCTACCATCACAGAAAAGATCTATACATCCCAAGCATCAGTTACGACGACAGAG
CCGACAGGCAGTCAAACTAGTGTAGGCACTAAACTAGTAACCACATCTCAGGCGACAGGGAACAATTCAGGTAACAGAGC
CACCAGTACAAACAGAGCAGTAACATCGACATCTGCAACTACTGTAGAAACAGCTACCTCCCCCTCAGTGAGGAGAAAAA
ACACCACTCCTCATACTAAGCCTAATTCAACCACCAAAGGACACCATAGCACCAAAAAAAGAGCAACGCGAGCTGCAAAG
ACAGTCTCTCCAGCTGTAACACATAGCACAAATCCTACTTTTTATCCCACAACAAATGTTGGACTACTATCGAGTACTGC
CAACCCTCCAAGAGAAAGCACATCGAGTGCAGTTGCGCCTTCCAGTGCAAGCACCGCAGGTCTTGCGTTTGGTATTATTG
CTGGAGGTGTGGTGTGCTTTCTACTTCTTGGCTTTCTATATCTTGTATGTCTTGTATGTCGGAGAAGAGCCAGAGAGAGA
CGTCGGTTAGAGATAGATCGTTTAGCACTCGCAATGGAGGCGTTCAATCCTTCTGAGGGCGATTATTCCGATTCCGAAGT
AAACGATATATTAGAAGATACAAACGTAGACCGGCACAACCCTGAGAAGAATAATCAAAGGTAA

Upstream 100 bases:

>100_bases
TAAAAACTTTACTAAAAATAAATTATTTTATATTTACAAAAACCATCGTATTTATTGCTATAATTTACTAATAAATTAAT
AATAAATACTGCTTTTAGTC

Downstream 100 bases:

>100_bases
CTTGCTCTAAAATATAAGGAAAAATTTCTACTGACTTCGATTTTCGATTTACTATAAAAGAAAGTAGAACTGTAAAATCT
TGTTTTACCTTTTACTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MQGQENRLISYLIHGGCKYQLSQKGNELTLEIENSYGKKASVSVSGVDCSNFTPRLDPLSKSNTAQVVLSFKSIGGKYKS
VVYSYNSGQGSLTEQGPGYTHPGQLLSINGCGPVNREKVCAVYNESGSTKVQVLSVNSDTGAIITSVAPKIINGLDKNVA
AISATEGGGQRIVVLAKDGTGLKTGGSTGNSITMSPFTPTGGLSGEKVDKILLNACKDSRVCAVVTSLKGEVYYLKSNGD
SISTTSTKIASYTGDSTSLSVDPEYGAGSTVSKFNVFVTGNGGSVTKASFEVIGNQCEKSNSATITEKIYTSQASVTTTE
PTGSQTSVGTKLVTTSQATGNNSGNRATSTNRAVTSTSATTVETATSPSVRRKNTTPHTKPNSTTKGHHSTKKRATRAAK
TVSPAVTHSTNPTFYPTTNVGLLSSTANPPRESTSSAVAPSSASTAGLAFGIIAGGVVCFLLLGFLYLVCLVCRRRARER
RRLEIDRLALAMEAFNPSEGDYSDSEVNDILEDTNVDRHNPEKNNQR

Sequences:

>Translated_527_residues
MQGQENRLISYLIHGGCKYQLSQKGNELTLEIENSYGKKASVSVSGVDCSNFTPRLDPLSKSNTAQVVLSFKSIGGKYKS
VVYSYNSGQGSLTEQGPGYTHPGQLLSINGCGPVNREKVCAVYNESGSTKVQVLSVNSDTGAIITSVAPKIINGLDKNVA
AISATEGGGQRIVVLAKDGTGLKTGGSTGNSITMSPFTPTGGLSGEKVDKILLNACKDSRVCAVVTSLKGEVYYLKSNGD
SISTTSTKIASYTGDSTSLSVDPEYGAGSTVSKFNVFVTGNGGSVTKASFEVIGNQCEKSNSATITEKIYTSQASVTTTE
PTGSQTSVGTKLVTTSQATGNNSGNRATSTNRAVTSTSATTVETATSPSVRRKNTTPHTKPNSTTKGHHSTKKRATRAAK
TVSPAVTHSTNPTFYPTTNVGLLSSTANPPRESTSSAVAPSSASTAGLAFGIIAGGVVCFLLLGFLYLVCLVCRRRARER
RRLEIDRLALAMEAFNPSEGDYSDSEVNDILEDTNVDRHNPEKNNQR
>Mature_527_residues
MQGQENRLISYLIHGGCKYQLSQKGNELTLEIENSYGKKASVSVSGVDCSNFTPRLDPLSKSNTAQVVLSFKSIGGKYKS
VVYSYNSGQGSLTEQGPGYTHPGQLLSINGCGPVNREKVCAVYNESGSTKVQVLSVNSDTGAIITSVAPKIINGLDKNVA
AISATEGGGQRIVVLAKDGTGLKTGGSTGNSITMSPFTPTGGLSGEKVDKILLNACKDSRVCAVVTSLKGEVYYLKSNGD
SISTTSTKIASYTGDSTSLSVDPEYGAGSTVSKFNVFVTGNGGSVTKASFEVIGNQCEKSNSATITEKIYTSQASVTTTE
PTGSQTSVGTKLVTTSQATGNNSGNRATSTNRAVTSTSATTVETATSPSVRRKNTTPHTKPNSTTKGHHSTKKRATRAAK
TVSPAVTHSTNPTFYPTTNVGLLSSTANPPRESTSSAVAPSSASTAGLAFGIIAGGVVCFLLLGFLYLVCLVCRRRARER
RRLEIDRLALAMEAFNPSEGDYSDSEVNDILEDTNVDRHNPEKNNQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55264; Mature: 55264

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGQENRLISYLIHGGCKYQLSQKGNELTLEIENSYGKKASVSVSGVDCSNFTPRLDPLS
CCCCHHHHEEEEECCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC
KSNTAQVVLSFKSIGGKYKSVVYSYNSGQGSLTEQGPGYTHPGQLLSINGCGPVNREKVC
CCCCEEEEEEEHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEE
AVYNESGSTKVQVLSVNSDTGAIITSVAPKIINGLDKNVAAISATEGGGQRIVVLAKDGT
EEEECCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCC
GLKTGGSTGNSITMSPFTPTGGLSGEKVDKILLNACKDSRVCAVVTSLKGEVYYLKSNGD
CCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCC
SISTTSTKIASYTGDSTSLSVDPEYGAGSTVSKFNVFVTGNGGSVTKASFEVIGNQCEKS
EEECCCEEEEEECCCCCEEEECCCCCCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHCCC
NSATITEKIYTSQASVTTTEPTGSQTSVGTKLVTTSQATGNNSGNRATSTNRAVTSTSAT
CCCEEEHHEEECCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCE
TVETATSPSVRRKNTTPHTKPNSTTKGHHSTKKRATRAAKTVSPAVTHSTNPTFYPTTNV
EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCEEECCCC
GLLSSTANPPRESTSSAVAPSSASTAGLAFGIIAGGVVCFLLLGFLYLVCLVCRRRARER
EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLEIDRLALAMEAFNPSEGDYSDSEVNDILEDTNVDRHNPEKNNQR
HCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQGQENRLISYLIHGGCKYQLSQKGNELTLEIENSYGKKASVSVSGVDCSNFTPRLDPLS
CCCCHHHHEEEEECCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC
KSNTAQVVLSFKSIGGKYKSVVYSYNSGQGSLTEQGPGYTHPGQLLSINGCGPVNREKVC
CCCCEEEEEEEHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEE
AVYNESGSTKVQVLSVNSDTGAIITSVAPKIINGLDKNVAAISATEGGGQRIVVLAKDGT
EEEECCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCC
GLKTGGSTGNSITMSPFTPTGGLSGEKVDKILLNACKDSRVCAVVTSLKGEVYYLKSNGD
CCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCC
SISTTSTKIASYTGDSTSLSVDPEYGAGSTVSKFNVFVTGNGGSVTKASFEVIGNQCEKS
EEECCCEEEEEECCCCCEEEECCCCCCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHCCC
NSATITEKIYTSQASVTTTEPTGSQTSVGTKLVTTSQATGNNSGNRATSTNRAVTSTSAT
CCCEEEHHEEECCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCE
TVETATSPSVRRKNTTPHTKPNSTTKGHHSTKKRATRAAKTVSPAVTHSTNPTFYPTTNV
EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCEEECCCC
GLLSSTANPPRESTSSAVAPSSASTAGLAFGIIAGGVVCFLLLGFLYLVCLVCRRRARER
EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLEIDRLALAMEAFNPSEGDYSDSEVNDILEDTNVDRHNPEKNNQR
HCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA