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The map label for this gene is 88608087

Identifier: 88608087

GI number: 88608087

Start: 587934

End: 588491

Strand: Reverse

Name: 88608087

Synonym: NSE_0672

Alternate gene names: NA

Gene position: 588491-587934 (Counterclockwise)

Preceding gene: 88608424

Following gene: 88608560

Centisome position: 68.51

GC content: 39.96

Gene sequence:

>558_bases
ATGGTTCGGGGGCAAAAGAAAGTTACTTATATACTCCTGGTAACGAGCATTTTGCTGCAGGTTTTTATTTCTTTTTCTGT
ACTATACGTAAGTTATACAAGAAGTAGCACGTGTAATAATATAAAAACTGCATACGAAAAAGCTTGTATAATTTTGTCTT
CCTCAGAAGATAGCGGTATTCCATCTAAAAAGCTAAACAAATTCACTCAACCTACTTTCGTTGCTGAAGTAGCGGCTCAG
GTGGCCAGTACTGTTGGTGTTACAGTTGTTACCTTTTTTTACAAAGAGGGAAGGCTTGCAGTCCCCGGCTACGCTACCTT
AATGGTTTTTTTCTTTATTTTAGGATCATTTTCTTCTTTCCCTTCGGTTGTGGACCGTAGAGAGTCGTTGTTCTACGCTA
CCAAACTGAATTCAGTTCTAGACAATGTGCTCGCTAGCCAAAGTTCTGTAACGGAAACACTTTCTACGATGACAGATAGA
GGAGAAATTGCTCTACGACACGCAACGAACAAACGCACGCCAGGCGAGTGGATTATAAAACAAACATATACCAGGTAA

Upstream 100 bases:

>100_bases
GTGTACAAAGGGCAAGAAAAACGTACGGACTAAGTATTGTGGAGTGTTCGTAGAAGTCCTACTTATAGCAATATTGAGGG
GCGCAGCCATGGCCTTAAGC

Downstream 100 bases:

>100_bases
TTCTGACCTGGAATGATTAGAAATGTATTGGCTTGAAAAATGCTCCTAGAGCGGCTTCTTTCATTGCTTCGTTTAGGTCT
GGGTGAGAGTGGCAGGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MVRGQKKVTYILLVTSILLQVFISFSVLYVSYTRSSTCNNIKTAYEKACIILSSSEDSGIPSKKLNKFTQPTFVAEVAAQ
VASTVGVTVVTFFYKEGRLAVPGYATLMVFFFILGSFSSFPSVVDRRESLFYATKLNSVLDNVLASQSSVTETLSTMTDR
GEIALRHATNKRTPGEWIIKQTYTR

Sequences:

>Translated_185_residues
MVRGQKKVTYILLVTSILLQVFISFSVLYVSYTRSSTCNNIKTAYEKACIILSSSEDSGIPSKKLNKFTQPTFVAEVAAQ
VASTVGVTVVTFFYKEGRLAVPGYATLMVFFFILGSFSSFPSVVDRRESLFYATKLNSVLDNVLASQSSVTETLSTMTDR
GEIALRHATNKRTPGEWIIKQTYTR
>Mature_185_residues
MVRGQKKVTYILLVTSILLQVFISFSVLYVSYTRSSTCNNIKTAYEKACIILSSSEDSGIPSKKLNKFTQPTFVAEVAAQ
VASTVGVTVVTFFYKEGRLAVPGYATLMVFFFILGSFSSFPSVVDRRESLFYATKLNSVLDNVLASQSSVTETLSTMTDR
GEIALRHATNKRTPGEWIIKQTYTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20546; Mature: 20546

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRGQKKVTYILLVTSILLQVFISFSVLYVSYTRSSTCNNIKTAYEKACIILSSSEDSGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHEEEEEECCCCCCC
PSKKLNKFTQPTFVAEVAAQVASTVGVTVVTFFYKEGRLAVPGYATLMVFFFILGSFSSF
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHCCCCC
PSVVDRRESLFYATKLNSVLDNVLASQSSVTETLSTMTDRGEIALRHATNKRTPGEWIIK
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHH
QTYTR
HCCCC
>Mature Secondary Structure
MVRGQKKVTYILLVTSILLQVFISFSVLYVSYTRSSTCNNIKTAYEKACIILSSSEDSGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHEEEEEECCCCCCC
PSKKLNKFTQPTFVAEVAAQVASTVGVTVVTFFYKEGRLAVPGYATLMVFFFILGSFSSF
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHCCCCC
PSVVDRRESLFYATKLNSVLDNVLASQSSVTETLSTMTDRGEIALRHATNKRTPGEWIIK
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHH
QTYTR
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA