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The map label for this gene is ynaI [H]

Identifier: 88608064

GI number: 88608064

Start: 750174

End: 751187

Strand: Reverse

Name: ynaI [H]

Synonym: NSE_0847

Alternate gene names: 88608064

Gene position: 751187-750174 (Counterclockwise)

Preceding gene: 88608333

Following gene: 88608810

Centisome position: 87.45

GC content: 37.28

Gene sequence:

>1014_bases
ATGGGCAATTTTGTTGAGACATATGGTGGTATTTTTATTGCCTTAGGGGTGGTGTTGGTAATTTTACTTTGTGATTTTTT
GATCCGTTCGAAAATTCAATCAAGCTCGGAACAGCATATTTTTTTCCGCCTTCTTAAAAATGTTAGATATCCTCTACTCA
TTGCGATGATTGTAGGTGGTTTTTTGCTCTCTCTTAAGAGTAGCACCATTTACGAGAAATTCTGGGCTTTATGCATGACG
CTAGAAGTTGTGCTTATTGGATGTATTGGTTGGGTATTTATTCGAATAATCAAAACTGTTGAGAATCATTGTGCACTAAA
GGAAGAGAATTATTCTTTTGTGATTGGTGTTCTTACAACAGTCACAAAAAGTGCACTGCTGTTGGTGGTAGGCTTAATGA
TACTGGACAAACTAAACGTCAATATTAGTGGGATTTTGGCTGTTGGTGGTATAGGTGGTGTTGTTATTGGTTTGGCTTCA
AAGGATTTATTTTCAAGTTTTTTTGGATTTATAACAATTCTTTTGGATCGGCCATTTAAAGTCGGAGATCTTATTTATTC
GAGCGACAGAAATATCATGGGGGTAGTTGACAAGATCACTTGGCGTTTTACTCGAGTCATTACCCTTGAAAAAAAACCCA
TGTATATTCCAAATGCGATTTTCTCAACAATCGTTATTCAAAATGAGAGTGAAGTTCTTGCAAGACGTATCGATGAAGTC
CTGAAATTTGAATTTCGTGAGAGTGAAATGATTCCGCAATTTACAAAGGAAATGAATTTGTTTCTTGAGAACAATGAACT
GCTCAATCAACAATTTAAGGCAACTTTTAATGTGAGTAAGATAGGAAGTGGAGTGGTCGGAATTAGGTTGATTGCATACA
CAAAAGCGAGGGTTTGGACGGAGTTCTCTTCAACTCGACAGGAAATTCTTCTTGCAATCTTCGAAACCGCAAGAAAAATG
GATCTCAAACCCATGTATCCAGAAACAGAGATGTGCCTGTACGACAGCCGTTGA

Upstream 100 bases:

>100_bases
GCACATGCTGTAGCCTTACACAACCCAGTGGTGATAGTATTACACGTAGAGGGAGGGTGTCAATATGGGAGAAGCATCGT
TTATTGGGTATATTGGATTG

Downstream 100 bases:

>100_bases
GCTGCCCTTTTATGTTGAGAGAGGACTTTTATTCTTTACGCAAAGCCTCCAGAAGAGTGGTAATGCTAGAACCGCAATTG
CTAGGCAATACGTGATAACT

Product: mechanosensitive ion channel family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MGNFVETYGGIFIALGVVLVILLCDFLIRSKIQSSSEQHIFFRLLKNVRYPLLIAMIVGGFLLSLKSSTIYEKFWALCMT
LEVVLIGCIGWVFIRIIKTVENHCALKEENYSFVIGVLTTVTKSALLLVVGLMILDKLNVNISGILAVGGIGGVVIGLAS
KDLFSSFFGFITILLDRPFKVGDLIYSSDRNIMGVVDKITWRFTRVITLEKKPMYIPNAIFSTIVIQNESEVLARRIDEV
LKFEFRESEMIPQFTKEMNLFLENNELLNQQFKATFNVSKIGSGVVGIRLIAYTKARVWTEFSSTRQEILLAIFETARKM
DLKPMYPETEMCLYDSR

Sequences:

>Translated_337_residues
MGNFVETYGGIFIALGVVLVILLCDFLIRSKIQSSSEQHIFFRLLKNVRYPLLIAMIVGGFLLSLKSSTIYEKFWALCMT
LEVVLIGCIGWVFIRIIKTVENHCALKEENYSFVIGVLTTVTKSALLLVVGLMILDKLNVNISGILAVGGIGGVVIGLAS
KDLFSSFFGFITILLDRPFKVGDLIYSSDRNIMGVVDKITWRFTRVITLEKKPMYIPNAIFSTIVIQNESEVLARRIDEV
LKFEFRESEMIPQFTKEMNLFLENNELLNQQFKATFNVSKIGSGVVGIRLIAYTKARVWTEFSSTRQEILLAIFETARKM
DLKPMYPETEMCLYDSR
>Mature_336_residues
GNFVETYGGIFIALGVVLVILLCDFLIRSKIQSSSEQHIFFRLLKNVRYPLLIAMIVGGFLLSLKSSTIYEKFWALCMTL
EVVLIGCIGWVFIRIIKTVENHCALKEENYSFVIGVLTTVTKSALLLVVGLMILDKLNVNISGILAVGGIGGVVIGLASK
DLFSSFFGFITILLDRPFKVGDLIYSSDRNIMGVVDKITWRFTRVITLEKKPMYIPNAIFSTIVIQNESEVLARRIDEVL
KFEFRESEMIPQFTKEMNLFLENNELLNQQFKATFNVSKIGSGVVGIRLIAYTKARVWTEFSSTRQEILLAIFETARKMD
LKPMYPETEMCLYDSR

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=217, Percent_Identity=28.5714285714286, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 38200; Mature: 38069

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNFVETYGGIFIALGVVLVILLCDFLIRSKIQSSSEQHIFFRLLKNVRYPLLIAMIVGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHH
FLLSLKSSTIYEKFWALCMTLEVVLIGCIGWVFIRIIKTVENHCALKEENYSFVIGVLTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHH
VTKSALLLVVGLMILDKLNVNISGILAVGGIGGVVIGLASKDLFSSFFGFITILLDRPFK
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCC
VGDLIYSSDRNIMGVVDKITWRFTRVITLEKKPMYIPNAIFSTIVIQNESEVLARRIDEV
HHHHEECCCCCHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHEECCCHHHHHHHHHHH
LKFEFRESEMIPQFTKEMNLFLENNELLNQQFKATFNVSKIGSGVVGIRLIAYTKARVWT
HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHH
EFSSTRQEILLAIFETARKMDLKPMYPETEMCLYDSR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
>Mature Secondary Structure 
GNFVETYGGIFIALGVVLVILLCDFLIRSKIQSSSEQHIFFRLLKNVRYPLLIAMIVGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHH
FLLSLKSSTIYEKFWALCMTLEVVLIGCIGWVFIRIIKTVENHCALKEENYSFVIGVLTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHH
VTKSALLLVVGLMILDKLNVNISGILAVGGIGGVVIGLASKDLFSSFFGFITILLDRPFK
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCC
VGDLIYSSDRNIMGVVDKITWRFTRVITLEKKPMYIPNAIFSTIVIQNESEVLARRIDEV
HHHHEECCCCCHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHEECCCHHHHHHHHHHH
LKFEFRESEMIPQFTKEMNLFLENNELLNQQFKATFNVSKIGSGVVGIRLIAYTKARVWT
HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHH
EFSSTRQEILLAIFETARKMDLKPMYPETEMCLYDSR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]