Click here to switch to the map view.

The map label for this gene is 88608045

Identifier: 88608045

GI number: 88608045

Start: 22538

End: 23332

Strand: Reverse

Name: 88608045

Synonym: NSE_0027

Alternate gene names: NA

Gene position: 23332-22538 (Counterclockwise)

Preceding gene: 88608187

Following gene: 88608704

Centisome position: 2.72

GC content: 44.28

Gene sequence:

>795_bases
ATGAGAACACGGAGAAGTAGCTTAGAAGCTAATCAAGAGGCTTTTCTTGGTGAAGTAAGGGTTGCCAGTCCTAGTTTGGC
GGAATTCTGCCGACAAAACAAAAATCTTCTTGGATTAAACGATTTACACAGATTATCGACAGAGGAAGTGATTGCTCAAG
CACGTTCACTGGTGGGATGTTATGACATGGTGCTGGAATGTCACTGCGAGGTGCAGGCTCTACACGAAGCAATTATACAA
GCCGAAAAAAAGATGAAGGAGGTAAGCAAGAAAGAAAAAGAAGCCTTGCTTGCTGATCTTGCAAAAATTGAGGGTTCATC
CGGAGTTCTTGCACAGGTCAGTGCGAAGATAGAAAAAGCTACTGGTATAGACATCTCTAGTGGATTTTCAGGTTTGATGA
AATCGTTAGGAGCAAAAATTGCTCCTAAGGGAAACGATTCGGATCCTACAAGAACACCATCTGATATTGAGTGTCTAGAG
AAAGTTATGCGGGCTAAGTCCCTCAGTACGCCTGTTACATTGGTCAAGGCTATAGTGGTTGCCATTGTCGCGCCAGGTGG
CATTCCATTAGTTGGAGCAGGTTTAACAATGCTTCCGATTGTGACGATGGTTTGGCCAGCTATGGTGGCTTGGGATGTAT
TGAAATTACCGAGCAACATTGCGGGTTCACCTTTTAACAGTGGCAACCTAAACAATGTGGTTAAAGAGTGTGAGGCAGGC
TTGAACAGCGGTCCCAAGATTGCAGAAAATATGCCACGATATGGTTCAAGAGAATCAAAACCAAGGACGCTGTAG

Upstream 100 bases:

>100_bases
TTTATCGGAGTGGAAAAATATGCAAGATGGCAGGAAAATACCGAAGTCACTCAAAAGGAGAATAGAAGAGTCCAACATTA
TTGGTGATCTGGCTGCCGGG

Downstream 100 bases:

>100_bases
TACAGATTAGCATTGCCAGATCTCTTTCTCCTAGTAAGGTACGCTTCTTCAATGTCTTGATCTTATTGGTATTTCGCCTT
GTGGTTGTTTTCTATATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MRTRRSSLEANQEAFLGEVRVASPSLAEFCRQNKNLLGLNDLHRLSTEEVIAQARSLVGCYDMVLECHCEVQALHEAIIQ
AEKKMKEVSKKEKEALLADLAKIEGSSGVLAQVSAKIEKATGIDISSGFSGLMKSLGAKIAPKGNDSDPTRTPSDIECLE
KVMRAKSLSTPVTLVKAIVVAIVAPGGIPLVGAGLTMLPIVTMVWPAMVAWDVLKLPSNIAGSPFNSGNLNNVVKECEAG
LNSGPKIAENMPRYGSRESKPRTL

Sequences:

>Translated_264_residues
MRTRRSSLEANQEAFLGEVRVASPSLAEFCRQNKNLLGLNDLHRLSTEEVIAQARSLVGCYDMVLECHCEVQALHEAIIQ
AEKKMKEVSKKEKEALLADLAKIEGSSGVLAQVSAKIEKATGIDISSGFSGLMKSLGAKIAPKGNDSDPTRTPSDIECLE
KVMRAKSLSTPVTLVKAIVVAIVAPGGIPLVGAGLTMLPIVTMVWPAMVAWDVLKLPSNIAGSPFNSGNLNNVVKECEAG
LNSGPKIAENMPRYGSRESKPRTL
>Mature_264_residues
MRTRRSSLEANQEAFLGEVRVASPSLAEFCRQNKNLLGLNDLHRLSTEEVIAQARSLVGCYDMVLECHCEVQALHEAIIQ
AEKKMKEVSKKEKEALLADLAKIEGSSGVLAQVSAKIEKATGIDISSGFSGLMKSLGAKIAPKGNDSDPTRTPSDIECLE
KVMRAKSLSTPVTLVKAIVVAIVAPGGIPLVGAGLTMLPIVTMVWPAMVAWDVLKLPSNIAGSPFNSGNLNNVVKECEAG
LNSGPKIAENMPRYGSRESKPRTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28235; Mature: 28235

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA