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The map label for this gene is ypdP [H]

Identifier: 88608187

GI number: 88608187

Start: 24139

End: 24783

Strand: Reverse

Name: ypdP [H]

Synonym: NSE_0029

Alternate gene names: 88608187

Gene position: 24783-24139 (Counterclockwise)

Preceding gene: 88608507

Following gene: 88608045

Centisome position: 2.89

GC content: 37.36

Gene sequence:

>645_bases
ATGATGACAATACTTATAAGTTTTAAATTCTTTGGAGAAAAAGGGATTTGTGCTTTCAGTAGTTGCGTTTTTATTCTTGC
AAATATACAGGTCTTGAGACAGGCACAGTTTTTCTTTCAGGATACTCCAGTAGCACTTGGAACAATTTCTTTTTCATCAA
TTTTCCTTGCTAATAACATTCTGACGGAGTATCGCGGAGTCAAAGCGGCGAAGACAAGTGTGTATTTGAGTTTTCTCTTG
TATGCATTCTTCACCTTGGAAATGATAATCACACTAAGCTATAGTCCTAAAACAGACGTCCACTATTCCTGCATGCAAAG
ACTCTTCCAAAGTAATGCCACACTTCTATTTTCTGGAATTATCGCATATTTGGTCAGTCAGCTTTCCGATATTTATATCT
TCAGTGGTCTAAAGCAGATTCTTCCAAACCGACGTTTTCTTTGGCTGCGCAACGTAATAGGTACAGGATTATCCTCGTTG
ATAGACAACATAATATTCTCAACTCTTGCATGGTATGTTCTTACAGGAAAACCAGTCGAAATGAAGAGTTTAGTGTTCAC
GTACATACTAGGAACCTATTGGATAAGGATATTAGTTGCATTATTAGGAACACCCTTTCTCTATTTCGCAAAACGACTAG
CATAG

Upstream 100 bases:

>100_bases
TCAAGTTTGCACTGCCTTGGAACAAATATTTCTGGATTCAATAAAATACTTAGAAGGTCTTCCGTCATACACAACTAGTC
TAATGGAGTTTCTTCTGTGC

Downstream 100 bases:

>100_bases
AGAACGCTAGTTGAAATAGCTTCAAGTTTTGTAGGTTGATCAAGATTGCTTTACAAAATGATTAGCACGAAGCCCTAATT
GATGTCCTTCCTAAGGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MMTILISFKFFGEKGICAFSSCVFILANIQVLRQAQFFFQDTPVALGTISFSSIFLANNILTEYRGVKAAKTSVYLSFLL
YAFFTLEMIITLSYSPKTDVHYSCMQRLFQSNATLLFSGIIAYLVSQLSDIYIFSGLKQILPNRRFLWLRNVIGTGLSSL
IDNIIFSTLAWYVLTGKPVEMKSLVFTYILGTYWIRILVALLGTPFLYFAKRLA

Sequences:

>Translated_214_residues
MMTILISFKFFGEKGICAFSSCVFILANIQVLRQAQFFFQDTPVALGTISFSSIFLANNILTEYRGVKAAKTSVYLSFLL
YAFFTLEMIITLSYSPKTDVHYSCMQRLFQSNATLLFSGIIAYLVSQLSDIYIFSGLKQILPNRRFLWLRNVIGTGLSSL
IDNIIFSTLAWYVLTGKPVEMKSLVFTYILGTYWIRILVALLGTPFLYFAKRLA
>Mature_214_residues
MMTILISFKFFGEKGICAFSSCVFILANIQVLRQAQFFFQDTPVALGTISFSSIFLANNILTEYRGVKAAKTSVYLSFLL
YAFFTLEMIITLSYSPKTDVHYSCMQRLFQSNATLLFSGIIAYLVSQLSDIYIFSGLKQILPNRRFLWLRNVIGTGLSSL
IDNIIFSTLAWYVLTGKPVEMKSLVFTYILGTYWIRILVALLGTPFLYFAKRLA

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 24322; Mature: 24322

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTILISFKFFGEKGICAFSSCVFILANIQVLRQAQFFFQDTPVALGTISFSSIFLANNI
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH
LTEYRGVKAAKTSVYLSFLLYAFFTLEMIITLSYSPKTDVHYSCMQRLFQSNATLLFSGI
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
IAYLVSQLSDIYIFSGLKQILPNRRFLWLRNVIGTGLSSLIDNIIFSTLAWYVLTGKPVE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
MKSLVFTYILGTYWIRILVALLGTPFLYFAKRLA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MMTILISFKFFGEKGICAFSSCVFILANIQVLRQAQFFFQDTPVALGTISFSSIFLANNI
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH
LTEYRGVKAAKTSVYLSFLLYAFFTLEMIITLSYSPKTDVHYSCMQRLFQSNATLLFSGI
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
IAYLVSQLSDIYIFSGLKQILPNRRFLWLRNVIGTGLSSLIDNIIFSTLAWYVLTGKPVE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
MKSLVFTYILGTYWIRILVALLGTPFLYFAKRLA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]