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The map label for this gene is petA

Identifier: 88608022

GI number: 88608022

Start: 546044

End: 546565

Strand: Direct

Name: petA

Synonym: NSE_0624

Alternate gene names: 88608022

Gene position: 546044-546565 (Clockwise)

Preceding gene: 88608368

Following gene: 88608151

Centisome position: 63.57

GC content: 48.08

Gene sequence:

>522_bases
ATGGTAGATAAAAAAAGAAGAGATTTCATAGTTACAACTACGGTTGCCTTCGGTGCTGGTGGTGCTGTTGCTGCTACCTG
GCCCTTGTTGAAGTCGTTTGGTCCCTCTGCGGATGTACTCGCGACAGCTACAAGAGAAGTGGATATAAGCAATGTGAAGC
CTGGTCAGGGTGTTAAGGTTTTATGGCAGGGAAAACCCGTCTACATAAGAAACAGGACAGAAGAAGAGATAAGGATGGCG
CGGAACGCTGATCTTACCTCTCTTAAGGATCCTGAACGCGACGCTGCGCGTGTAAAACCGAACAAGGAGAACTGGCTTGT
GGTGGTCGGTGTATGTACGCACCTTGGGTGTGTGCCCCTTAGTAATACTGATGGTACTTTCTTCTGTCCTTGCCACGGGT
CGCACTATGATACTTCCGGCAGGGTTGTTTCCGGTCCAGCGCCGACTAATCTTGTTGTGCCGGATTATTATTTCATCAAC
GATACAACAGTTGTGGTAGGAGCAAAGGAAAAAAATGTCTGA

Upstream 100 bases:

>100_bases
ATTATTCCGTGTTATACTTATTCCTGCTTTTTGGAGTATTCATTCTTGATGCAGCTTTGTCCACGGCTTTGGGTATGCTT
ATTTAATTTTCTGTAGACAG

Downstream 100 bases:

>100_bases
TACTGAAGCTACTCTAAAGGGGAATTCTGGTGTTGTAGGATGGATAGAACATAGGTTGCCCATCTTCTCGTTTTTAAAGG
GGTTTTTTGTCGATTATAGG

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MVDKKRRDFIVTTTVAFGAGGAVAATWPLLKSFGPSADVLATATREVDISNVKPGQGVKVLWQGKPVYIRNRTEEEIRMA
RNADLTSLKDPERDAARVKPNKENWLVVVGVCTHLGCVPLSNTDGTFFCPCHGSHYDTSGRVVSGPAPTNLVVPDYYFIN
DTTVVVGAKEKNV

Sequences:

>Translated_173_residues
MVDKKRRDFIVTTTVAFGAGGAVAATWPLLKSFGPSADVLATATREVDISNVKPGQGVKVLWQGKPVYIRNRTEEEIRMA
RNADLTSLKDPERDAARVKPNKENWLVVVGVCTHLGCVPLSNTDGTFFCPCHGSHYDTSGRVVSGPAPTNLVVPDYYFIN
DTTVVVGAKEKNV
>Mature_173_residues
MVDKKRRDFIVTTTVAFGAGGAVAATWPLLKSFGPSADVLATATREVDISNVKPGQGVKVLWQGKPVYIRNRTEEEIRMA
RNADLTSLKDPERDAARVKPNKENWLVVVGVCTHLGCVPLSNTDGTFFCPCHGSHYDTSGRVVSGPAPTNLVVPDYYFIN
DTTVVVGAKEKNV

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=160, Percent_Identity=46.25, Blast_Score=158, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17540418, Length=165, Percent_Identity=41.8181818181818, Blast_Score=137, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6320811, Length=159, Percent_Identity=47.1698113207547, Blast_Score=156, Evalue=2e-39,
Organism=Drosophila melanogaster, GI24580896, Length=141, Percent_Identity=51.063829787234, Blast_Score=152, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 18776; Mature: 18776

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDKKRRDFIVTTTVAFGAGGAVAATWPLLKSFGPSADVLATATREVDISNVKPGQGVKV
CCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECEEECCCCCCCCCEEE
LWQGKPVYIRNRTEEEIRMARNADLTSLKDPERDAARVKPNKENWLVVVGVCTHLGCVPL
EECCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEECHHCCEEEE
SNTDGTFFCPCHGSHYDTSGRVVSGPAPTNLVVPDYYFINDTTVVVGAKEKNV
CCCCCEEEEECCCCCCCCCCEEEECCCCCCEECCCEEEECCCEEEEECCCCCC
>Mature Secondary Structure
MVDKKRRDFIVTTTVAFGAGGAVAATWPLLKSFGPSADVLATATREVDISNVKPGQGVKV
CCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECEEECCCCCCCCCEEE
LWQGKPVYIRNRTEEEIRMARNADLTSLKDPERDAARVKPNKENWLVVVGVCTHLGCVPL
EECCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEECHHCCEEEE
SNTDGTFFCPCHGSHYDTSGRVVSGPAPTNLVVPDYYFINDTTVVVGAKEKNV
CCCCCEEEEECCCCCCCCCCEEEECCCCCCEECCCEEEECCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]