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The map label for this gene is yaaJ [C]

Identifier: 88607987

GI number: 88607987

Start: 121791

End: 123128

Strand: Direct

Name: yaaJ [C]

Synonym: NSE_0153

Alternate gene names: 88607987

Gene position: 121791-123128 (Clockwise)

Preceding gene: 88608565

Following gene: 88608169

Centisome position: 14.18

GC content: 41.33

Gene sequence:

>1338_bases
GTGTTGGATATCTTTTTTACTCTCCAGGGCTATTTTTTGCAGTTTTTTGTAATACCGATGCTCATTTGTGTGGGTTTCTG
GGTTTCCTGCAAAATGGGGTGGTTACATATTCTTAAGATACCGATTGCTTTGAAGTGTCTTTTTGCTCCGGCTGAGGGCT
GTAGAAAAAACATTTCTTCTTTTTCAGCTTTTTCAGCTATATTAGGTGGAAATCTTGGAGTTGGTAATCTTTCTGGTACT
GCGATTGCGCTTGCTACTGGGGGTCCCGGTTCGATTATATGGATGATTATAATCATCCTTTTCACTGCTTCTATTAAGTA
TGTCACTTGTTACTTAAGTCTGGTTTACAGGACAAAGGTAGGTACGCGCTTTATTGGTGGTCCTATGTATTTTCTTCGAG
ATGGGCTTAAGTCTAAGGTTTTGTCACTATTTTTTTGTATAGGATTGGTTTGTACAGCAACCATCGGCGGTGGCTTGGTC
CAAGTAAACTCTCTTGCTTTACCAATGGATTATCTCCACATACCAAGGATCTATGGGGGTCTCATTTTCACAGTATTGGT
TGCACTTGTAACTTTTGGTAGGCTTCGCTTTTTTACTCAAGTGGTTTCTTTTGTAGTGCCCTTTATGGCTATTGGGTATC
TGGGTGTCTCGCTTTACATACTTGTTTTGCACGCGGATAAAATCCCGAATGCACTCTTGCTTATGCTAACATCGATTTGG
AGCAGAACGGATATACAAGGCGGAGTTGTTGGATTTGCATGGATGCAGTTTTTGACTACGATGCAAATGGGTATTTCCAG
GGGCATATTTGCTTCCGATATTGGTTTTGGATTGGAGGGTATACTTCACGCAAACGTGAAACAGGAAGAAGGTCATAAGC
TGCCGTTAGAGATAGAGCAAGGTCTGATAGGTGTGATTTCACCGTTTATTGTTTTGCTGGTCTGTTTTGTTACGGCCTTG
GTGCTTATGGTGACAGGTGTTGCATGGGGGCCTTTCGAAAGTACTAATATGTGTTTTGAGGCTTTCAGGGTTGGTGCTGA
AAGTGATGTTGCAGGGTACTTACTTATCGTTGTATTGTTCTGTTTCGCGTTTACAACAGTCTTGACATGGTCTTTTTGCG
CGCAGTGTGCGTTTGAATATCTCACAAATTATAATCCTAAAGTGCTTAAATTGTGGAAAGTTTTCTTCGTTCTCGTATTG
CCCTTTGGAGCACTATCGGAGGTGTATTTTCTTTGGAGGATAGTCGACCTTACTTCTGCGATTATGCTCGTGACGAATTT
AATAGGAATAGTGTTTCTTGCAGGTGGTGTCACGCATGAAAGCAATAACAATGTTTGA

Upstream 100 bases:

>100_bases
GAGTTTTCAGACGCCAGGAAATTAAAGCGAGCTGAGCTAGGTTTCTTTTTCTTTGTTTTTTGGTTACTAATTTTACAGAG
GTGGCAGGGCGCGATTTTTT

Downstream 100 bases:

>100_bases
GAATTGTGAGTTTACTAGATTAGATGTGTTTGCTATTCTGACAGCAAGTTCTCGTCGCGTTTTTGGATGAAAAAATGGAA
CCTACCAACCGGTAGTGACA

Product: sodium:alanine symporter family protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MLDIFFTLQGYFLQFFVIPMLICVGFWVSCKMGWLHILKIPIALKCLFAPAEGCRKNISSFSAFSAILGGNLGVGNLSGT
AIALATGGPGSIIWMIIIILFTASIKYVTCYLSLVYRTKVGTRFIGGPMYFLRDGLKSKVLSLFFCIGLVCTATIGGGLV
QVNSLALPMDYLHIPRIYGGLIFTVLVALVTFGRLRFFTQVVSFVVPFMAIGYLGVSLYILVLHADKIPNALLLMLTSIW
SRTDIQGGVVGFAWMQFLTTMQMGISRGIFASDIGFGLEGILHANVKQEEGHKLPLEIEQGLIGVISPFIVLLVCFVTAL
VLMVTGVAWGPFESTNMCFEAFRVGAESDVAGYLLIVVLFCFAFTTVLTWSFCAQCAFEYLTNYNPKVLKLWKVFFVLVL
PFGALSEVYFLWRIVDLTSAIMLVTNLIGIVFLAGGVTHESNNNV

Sequences:

>Translated_445_residues
MLDIFFTLQGYFLQFFVIPMLICVGFWVSCKMGWLHILKIPIALKCLFAPAEGCRKNISSFSAFSAILGGNLGVGNLSGT
AIALATGGPGSIIWMIIIILFTASIKYVTCYLSLVYRTKVGTRFIGGPMYFLRDGLKSKVLSLFFCIGLVCTATIGGGLV
QVNSLALPMDYLHIPRIYGGLIFTVLVALVTFGRLRFFTQVVSFVVPFMAIGYLGVSLYILVLHADKIPNALLLMLTSIW
SRTDIQGGVVGFAWMQFLTTMQMGISRGIFASDIGFGLEGILHANVKQEEGHKLPLEIEQGLIGVISPFIVLLVCFVTAL
VLMVTGVAWGPFESTNMCFEAFRVGAESDVAGYLLIVVLFCFAFTTVLTWSFCAQCAFEYLTNYNPKVLKLWKVFFVLVL
PFGALSEVYFLWRIVDLTSAIMLVTNLIGIVFLAGGVTHESNNNV
>Mature_445_residues
MLDIFFTLQGYFLQFFVIPMLICVGFWVSCKMGWLHILKIPIALKCLFAPAEGCRKNISSFSAFSAILGGNLGVGNLSGT
AIALATGGPGSIIWMIIIILFTASIKYVTCYLSLVYRTKVGTRFIGGPMYFLRDGLKSKVLSLFFCIGLVCTATIGGGLV
QVNSLALPMDYLHIPRIYGGLIFTVLVALVTFGRLRFFTQVVSFVVPFMAIGYLGVSLYILVLHADKIPNALLLMLTSIW
SRTDIQGGVVGFAWMQFLTTMQMGISRGIFASDIGFGLEGILHANVKQEEGHKLPLEIEQGLIGVISPFIVLLVCFVTAL
VLMVTGVAWGPFESTNMCFEAFRVGAESDVAGYLLIVVLFCFAFTTVLTWSFCAQCAFEYLTNYNPKVLKLWKVFFVLVL
PFGALSEVYFLWRIVDLTSAIMLVTNLIGIVFLAGGVTHESNNNV

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=442, Percent_Identity=25.3393665158371, Blast_Score=127, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 48827; Mature: 48827

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDIFFTLQGYFLQFFVIPMLICVGFWVSCKMGWLHILKIPIALKCLFAPAEGCRKNISS
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FSAFSAILGGNLGVGNLSGTAIALATGGPGSIIWMIIIILFTASIKYVTCYLSLVYRTKV
HHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTRFIGGPMYFLRDGLKSKVLSLFFCIGLVCTATIGGGLVQVNSLALPMDYLHIPRIYGG
CCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHH
LIFTVLVALVTFGRLRFFTQVVSFVVPFMAIGYLGVSLYILVLHADKIPNALLLMLTSIW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SRTDIQGGVVGFAWMQFLTTMQMGISRGIFASDIGFGLEGILHANVKQEEGHKLPLEIEQ
HCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHH
GLIGVISPFIVLLVCFVTALVLMVTGVAWGPFESTNMCFEAFRVGAESDVAGYLLIVVLF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
CFAFTTVLTWSFCAQCAFEYLTNYNPKVLKLWKVFFVLVLPFGALSEVYFLWRIVDLTSA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMLVTNLIGIVFLAGGVTHESNNNV
HHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLDIFFTLQGYFLQFFVIPMLICVGFWVSCKMGWLHILKIPIALKCLFAPAEGCRKNISS
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FSAFSAILGGNLGVGNLSGTAIALATGGPGSIIWMIIIILFTASIKYVTCYLSLVYRTKV
HHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTRFIGGPMYFLRDGLKSKVLSLFFCIGLVCTATIGGGLVQVNSLALPMDYLHIPRIYGG
CCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHH
LIFTVLVALVTFGRLRFFTQVVSFVVPFMAIGYLGVSLYILVLHADKIPNALLLMLTSIW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SRTDIQGGVVGFAWMQFLTTMQMGISRGIFASDIGFGLEGILHANVKQEEGHKLPLEIEQ
HCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHH
GLIGVISPFIVLLVCFVTALVLMVTGVAWGPFESTNMCFEAFRVGAESDVAGYLLIVVLF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
CFAFTTVLTWSFCAQCAFEYLTNYNPKVLKLWKVFFVLVLPFGALSEVYFLWRIVDLTSA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMLVTNLIGIVFLAGGVTHESNNNV
HHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]