| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607604
Identifier: 88607604
GI number: 88607604
Start: 700241
End: 701410
Strand: Direct
Name: 88607604
Synonym: APH_0680
Alternate gene names: NA
Gene position: 700241-701410 (Clockwise)
Preceding gene: 88607886
Following gene: 88607406
Centisome position: 47.59
GC content: 40.43
Gene sequence:
>1170_bases ATGTTGAGAGCTATCAAATGGAGTTTTTTTATAATCTTGTTGTTGGGTGCTCTCGTGTCTGCGGGAGTGTTTTTTGGAGC TCGTATTATAAGGGATATTAGCGGAGATTTGTTGCGTTCTGTTAAGGAAGTTCGCTTTGGTCTTACCTCGTTTGATTCTG TTGATTATGGAGATATTAAAATTGTACTCTCATATTCTTCTAATGGCTTATTAGGGGATAGTAAGAGGCGTTTATTTCCA TTAGTTAATGTTTTAGTTGAGGATTTTGTAGCTGTTGTAGATGGTATGCGGCTGGAGATTGATAATGTTGCTCTGTCGTA TGATTTTATAGTTGGAGCTACAAGCGTATTTTTGCCGAATGCTGGCGGAATGCGTATTGCGGTTCTGTCAGGAGAAGAGG TTCGTTATCAATGTAATAATATAGGTGCTGTGCTTTCGTTTGAATTGCGTGACAATCTATTCTTGTACACCATGAAGCGG TTGTTGGGGATTGAAGAGGGATTGGCTAATCAGATAGTTGCTGTGCGTTATATAGATAGCAGCGCCGCTAATTGTGTAAA TCAAAATACCAAAGAGGAAACGCCGGTATATAGTAGTGCTCGGTTTGACTTTGATGTTATTAGTAATGCGGAAGTCAAAG CAAATGTTGAGGTTTCTGCTAAGGGGGCAAATTCGGACTTTTTGTCTTTTAGTATACGAGACATGCTAGTGCATCAGTAT GGGGATGATAGGCGTGTTGATATTGATATCACTCAGTTTAGGTTATGGCGTAGAGATTTTAGTATGTCGTTGAAGGGGGA GGTATCTCTTGCTAGCGAGTGTGTCTTTAATTCGTTTCGTTCTTGTGGGTTAGATTTTCTTTTGGAAGTGCAAGGCTATC AGGATTTCTTAAAGTTTATGTATGAAGTTGCAGAAGGAGCTTCTGGTCCAGAAATCGGATTTGATGGTGCGGATGTAAGG AGAGGAGTTGATGCTCTAAGTGCGGCTGTTGGTGTTGCTGCTACTTTTGAAGAGGAGAATGATTCGATGACTTTATCCGT AGAGTCAGGAGGTGATGAACTCCGCGTAGGAAAAATTAGTTATGATGAGTTTGTTAAAGAGATTTTAGGTGCTTTGGCTA AGGATATTATAGCTGCAGAGTTGCCTGCTGTGGTAAGTGCTTTAGGTTAG
Upstream 100 bases:
>100_bases AGGAGCTAGATGGTCTCTGTGTGATCTTACCAGGTGAGACGCGGAATGTCTCTTTTGATCATAGAGAGTAAGCGGAGCGT AACTTTAAGGAGAAGAGGGC
Downstream 100 bases:
>100_bases TGAAATAGTTACCGCAAGATTTGGCATAATTTGCCAGTAAAGGTTTTGGCGCATATTGATGTGCTAGTTGTATAGCGTGA GTAATACCATTCTAACGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MLRAIKWSFFIILLLGALVSAGVFFGARIIRDISGDLLRSVKEVRFGLTSFDSVDYGDIKIVLSYSSNGLLGDSKRRLFP LVNVLVEDFVAVVDGMRLEIDNVALSYDFIVGATSVFLPNAGGMRIAVLSGEEVRYQCNNIGAVLSFELRDNLFLYTMKR LLGIEEGLANQIVAVRYIDSSAANCVNQNTKEETPVYSSARFDFDVISNAEVKANVEVSAKGANSDFLSFSIRDMLVHQY GDDRRVDIDITQFRLWRRDFSMSLKGEVSLASECVFNSFRSCGLDFLLEVQGYQDFLKFMYEVAEGASGPEIGFDGADVR RGVDALSAAVGVAATFEEENDSMTLSVESGGDELRVGKISYDEFVKEILGALAKDIIAAELPAVVSALG
Sequences:
>Translated_389_residues MLRAIKWSFFIILLLGALVSAGVFFGARIIRDISGDLLRSVKEVRFGLTSFDSVDYGDIKIVLSYSSNGLLGDSKRRLFP LVNVLVEDFVAVVDGMRLEIDNVALSYDFIVGATSVFLPNAGGMRIAVLSGEEVRYQCNNIGAVLSFELRDNLFLYTMKR LLGIEEGLANQIVAVRYIDSSAANCVNQNTKEETPVYSSARFDFDVISNAEVKANVEVSAKGANSDFLSFSIRDMLVHQY GDDRRVDIDITQFRLWRRDFSMSLKGEVSLASECVFNSFRSCGLDFLLEVQGYQDFLKFMYEVAEGASGPEIGFDGADVR RGVDALSAAVGVAATFEEENDSMTLSVESGGDELRVGKISYDEFVKEILGALAKDIIAAELPAVVSALG >Mature_389_residues MLRAIKWSFFIILLLGALVSAGVFFGARIIRDISGDLLRSVKEVRFGLTSFDSVDYGDIKIVLSYSSNGLLGDSKRRLFP LVNVLVEDFVAVVDGMRLEIDNVALSYDFIVGATSVFLPNAGGMRIAVLSGEEVRYQCNNIGAVLSFELRDNLFLYTMKR LLGIEEGLANQIVAVRYIDSSAANCVNQNTKEETPVYSSARFDFDVISNAEVKANVEVSAKGANSDFLSFSIRDMLVHQY GDDRRVDIDITQFRLWRRDFSMSLKGEVSLASECVFNSFRSCGLDFLLEVQGYQDFLKFMYEVAEGASGPEIGFDGADVR RGVDALSAAVGVAATFEEENDSMTLSVESGGDELRVGKISYDEFVKEILGALAKDIIAAELPAVVSALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42650; Mature: 42650
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRAIKWSFFIILLLGALVSAGVFFGARIIRDISGDLLRSVKEVRFGLTSFDSVDYGDIK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE IVLSYSSNGLLGDSKRRLFPLVNVLVEDFVAVVDGMRLEIDNVALSYDFIVGATSVFLPN EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEHHHHCCCEEEECC AGGMRIAVLSGEEVRYQCNNIGAVLSFELRDNLFLYTMKRLLGIEEGLANQIVAVRYIDS CCCCEEEEECCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCHHCCEEEEEEECC SAANCVNQNTKEETPVYSSARFDFDVISNAEVKANVEVSAKGANSDFLSFSIRDMLVHQY HHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHC GDDRRVDIDITQFRLWRRDFSMSLKGEVSLASECVFNSFRSCGLDFLLEVQGYQDFLKFM CCCCEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH YEVAEGASGPEIGFDGADVRRGVDALSAAVGVAATFEEENDSMTLSVESGGDELRVGKIS HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCEEEEEEEC YDEFVKEILGALAKDIIAAELPAVVSALG HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLRAIKWSFFIILLLGALVSAGVFFGARIIRDISGDLLRSVKEVRFGLTSFDSVDYGDIK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE IVLSYSSNGLLGDSKRRLFPLVNVLVEDFVAVVDGMRLEIDNVALSYDFIVGATSVFLPN EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEHHHHCCCEEEECC AGGMRIAVLSGEEVRYQCNNIGAVLSFELRDNLFLYTMKRLLGIEEGLANQIVAVRYIDS CCCCEEEEECCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCHHCCEEEEEEECC SAANCVNQNTKEETPVYSSARFDFDVISNAEVKANVEVSAKGANSDFLSFSIRDMLVHQY HHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHC GDDRRVDIDITQFRLWRRDFSMSLKGEVSLASECVFNSFRSCGLDFLLEVQGYQDFLKFM CCCCEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH YEVAEGASGPEIGFDGADVRRGVDALSAAVGVAATFEEENDSMTLSVESGGDELRVGKIS HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCEEEEEEEC YDEFVKEILGALAKDIIAAELPAVVSALG HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA