Click here to switch to the map view.

The map label for this gene is fdxB [H]

Identifier: 88607886

GI number: 88607886

Start: 699861

End: 700211

Strand: Direct

Name: fdxB [H]

Synonym: APH_0679

Alternate gene names: 88607886

Gene position: 699861-700211 (Clockwise)

Preceding gene: 88607180

Following gene: 88607604

Centisome position: 47.57

GC content: 42.17

Gene sequence:

>351_bases
ATGCCATTAGTAACTTTTGTTTCTCCAGATGGGACGAGAAAAACCTATGAGGCACTTGAGGGAGAGACTCTTTTAACTCT
AGCTCATAGAAATAAGATTGACTTAGAAGGTGCGTGTGAAGGGTCTATGGCCTGTTCTACATGTCATCTTATAGTAGCTC
CCGAATGGTATAGTAAGGTTGAACAGTACAATGAGTTGACGGATGAAGAGAACGATATGCTTGACTTAGCATTTGGTTTG
ACGGAAACGTCTAGATTAGGATGTCAGGTGGTGATGACTAAGGAGCTAGATGGTCTCTGTGTGATCTTACCAGGTGAGAC
GCGGAATGTCTCTTTTGATCATAGAGAGTAA

Upstream 100 bases:

>100_bases
GCAGCTTAATGCAAAGATTGTAGATTTAAAGAAAAAAGAGGGGTAATATCTTAGTGATAGGCGACGATAATAGCGGCGTT
ATATTGAGGAGTGCGGTGGT

Downstream 100 bases:

>100_bases
GCGGAGCGTAACTTTAAGGAGAAGAGGGCATGTTGAGAGCTATCAAATGGAGTTTTTTTATAATCTTGTTGTTGGGTGCT
CTCGTGTCTGCGGGAGTGTT

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: Adrenodoxin-like protein [H]

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MPLVTFVSPDGTRKTYEALEGETLLTLAHRNKIDLEGACEGSMACSTCHLIVAPEWYSKVEQYNELTDEENDMLDLAFGL
TETSRLGCQVVMTKELDGLCVILPGETRNVSFDHRE

Sequences:

>Translated_116_residues
MPLVTFVSPDGTRKTYEALEGETLLTLAHRNKIDLEGACEGSMACSTCHLIVAPEWYSKVEQYNELTDEENDMLDLAFGL
TETSRLGCQVVMTKELDGLCVILPGETRNVSFDHRE
>Mature_115_residues
PLVTFVSPDGTRKTYEALEGETLLTLAHRNKIDLEGACEGSMACSTCHLIVAPEWYSKVEQYNELTDEENDMLDLAFGLT
ETSRLGCQVVMTKELDGLCVILPGETRNVSFDHRE

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI4758352, Length=103, Percent_Identity=48.5436893203884, Blast_Score=100, Evalue=3e-22,
Organism=Homo sapiens, GI72534754, Length=110, Percent_Identity=46.3636363636364, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788874, Length=106, Percent_Identity=44.3396226415094, Blast_Score=72, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17544202, Length=110, Percent_Identity=50, Blast_Score=112, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6325004, Length=108, Percent_Identity=58.3333333333333, Blast_Score=133, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24661503, Length=110, Percent_Identity=42.7272727272727, Blast_Score=100, Evalue=2e-22,
Organism=Drosophila melanogaster, GI281365644, Length=103, Percent_Identity=44.6601941747573, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12943; Mature: 12812

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLVTFVSPDGTRKTYEALEGETLLTLAHRNKIDLEGACEGSMACSTCHLIVAPEWYSKV
CCEEEEECCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCHHHHHH
EQYNELTDEENDMLDLAFGLTETSRLGCQVVMTKELDGLCVILPGETRNVSFDHRE
HHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
PLVTFVSPDGTRKTYEALEGETLLTLAHRNKIDLEGACEGSMACSTCHLIVAPEWYSKV
CEEEEECCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCHHHHHH
EQYNELTDEENDMLDLAFGLTETSRLGCQVVMTKELDGLCVILPGETRNVSFDHRE
HHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11319266 [H]