Click here to switch to the map view.

The map label for this gene is 88607560

Identifier: 88607560

GI number: 88607560

Start: 1454943

End: 1455551

Strand: Reverse

Name: 88607560

Synonym: APH_1394

Alternate gene names: NA

Gene position: 1455551-1454943 (Counterclockwise)

Preceding gene: 88606868

Following gene: 88607326

Centisome position: 98.93

GC content: 41.05

Gene sequence:

>609_bases
ATGGTAGAGATGTTCTGGAAGTGCAGGAAAACGTTTTGCCGTGTTGTGACGTTGTCTCTTTTTATGTTTGTGGCATTTTC
TAATGCTAGTCACGCATGCGAGCAACAATATCGGCATATATGCCAATTTGTGGAAGAGTTGAAGACCAGAGTACGTGTCA
TTGTTTTAGAGGACAAGGCGGTTAGAGAATCTTTAGGACAAGCGGTGCAAGAGGTTCTTGATTTTCCTAGACTTTCTAAG
TTTGCGATGGGGCAATACTGGAAAGATGCAGATATGCGTCAGAGAGATGAGTTTCAGGATGTATATAGTCAATACATAAA
GAAAGTATACGTGACGCAGTTGAAGGAGTTTGCACATCACGGGATGAAGATTCTGTCTGTTCGCGAGCTTGGTGAAGGTA
AGTACGCGGTTCGTGTTCGGTTAACCCATCCTGAACATAGGGATGATTTTATAGTGCTAGAATTTCATATTGTGGAAGCA
AGCACTCTTAAGATCAGTGACATAAGAATCAACAATTCTTTGAGTATCTCTGTAAACCAGAGGACCATGGTGAACGAAGT
AATTCAAAAATACGGTATTGACGGAGCAATATCTCATTTTAGACGATAG

Upstream 100 bases:

>100_bases
GAAGAGTGTTCAGACGCTAATTAAGAAAAGTAGTCTAAAGGCGTATGTATTAATCTTACGATAATCACTACTGATTAGTA
TATTATACGTCGGTATTGTA

Downstream 100 bases:

>100_bases
CTATGCTGTAAAAAAGACAAATAAATCAAGCTACTGTCCTTATTACGCTATTAGACATGATTATTGAGAGTTGCACCTCC
TCAGAAGGTGAATAAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MVEMFWKCRKTFCRVVTLSLFMFVAFSNASHACEQQYRHICQFVEELKTRVRVIVLEDKAVRESLGQAVQEVLDFPRLSK
FAMGQYWKDADMRQRDEFQDVYSQYIKKVYVTQLKEFAHHGMKILSVRELGEGKYAVRVRLTHPEHRDDFIVLEFHIVEA
STLKISDIRINNSLSISVNQRTMVNEVIQKYGIDGAISHFRR

Sequences:

>Translated_202_residues
MVEMFWKCRKTFCRVVTLSLFMFVAFSNASHACEQQYRHICQFVEELKTRVRVIVLEDKAVRESLGQAVQEVLDFPRLSK
FAMGQYWKDADMRQRDEFQDVYSQYIKKVYVTQLKEFAHHGMKILSVRELGEGKYAVRVRLTHPEHRDDFIVLEFHIVEA
STLKISDIRINNSLSISVNQRTMVNEVIQKYGIDGAISHFRR
>Mature_202_residues
MVEMFWKCRKTFCRVVTLSLFMFVAFSNASHACEQQYRHICQFVEELKTRVRVIVLEDKAVRESLGQAVQEVLDFPRLSK
FAMGQYWKDADMRQRDEFQDVYSQYIKKVYVTQLKEFAHHGMKILSVRELGEGKYAVRVRLTHPEHRDDFIVLEFHIVEA
STLKISDIRINNSLSISVNQRTMVNEVIQKYGIDGAISHFRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23843; Mature: 23843

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEMFWKCRKTFCRVVTLSLFMFVAFSNASHACEQQYRHICQFVEELKTRVRVIVLEDKA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCHH
VRESLGQAVQEVLDFPRLSKFAMGQYWKDADMRQRDEFQDVYSQYIKKVYVTQLKEFAHH
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMKILSVRELGEGKYAVRVRLTHPEHRDDFIVLEFHIVEASTLKISDIRINNSLSISVNQ
CHHEEHHHHCCCCCEEEEEEEECCCCCCCEEEEEEEEEEECEEEEEEEEECCEEEEEECH
RTMVNEVIQKYGIDGAISHFRR
HHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MVEMFWKCRKTFCRVVTLSLFMFVAFSNASHACEQQYRHICQFVEELKTRVRVIVLEDKA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCHH
VRESLGQAVQEVLDFPRLSKFAMGQYWKDADMRQRDEFQDVYSQYIKKVYVTQLKEFAHH
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMKILSVRELGEGKYAVRVRLTHPEHRDDFIVLEFHIVEASTLKISDIRINNSLSISVNQ
CHHEEHHHHCCCCCEEEEEEEECCCCCCCEEEEEEEEEEECEEEEEEEEECCEEEEEECH
RTMVNEVIQKYGIDGAISHFRR
HHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA