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The map label for this gene is ydiA [C]

Identifier: 88607313

GI number: 88607313

Start: 1023559

End: 1024401

Strand: Reverse

Name: ydiA [C]

Synonym: APH_0961

Alternate gene names: 88607313

Gene position: 1024401-1023559 (Counterclockwise)

Preceding gene: 88607857

Following gene: 88607680

Centisome position: 69.63

GC content: 39.03

Gene sequence:

>843_bases
ATGGGTGAGAAGGCTATTCTTGATCTTCACCTTGTTTCGGATTCCACGTGTGAGACAGTTGTGTCTGTTGCAAGGGCGGC
AGTTGAGCATTTTAAGTCTTTAGAAGTAAACGAGTTTGTTTGGTCTTTGGTTGGCAGCAAGAGTCATGTAGATAGAATAA
TCTCTAGTATTGATCGCAAGAGAAATAACCTAATAATGTATACTGTGCTTGATGATGACCTGAGGGAATATCTCAAGAAA
AAGGCTGAAGCTTATAATATTAGGTGTATCCCTATACTATCGCATATAATCAGGGAGATTTCTTGTTATTTAAGCGTTGC
TAAGGACCCAAACGCTCATCCGCATCGGCTTAGTGATGAGTATTTTAACAGAATAGAAGCGATAAATTATACTATTGCGC
ATGATGATGGGCAGAGTCTTTGGGATATTGACGGTGCTGATATAATTATAGTAGGGGTTTCAAGAACTTCGAAGTCACCC
ACAAGCATCTATCTTGCTTATAGGGGCTATAAAGTAGTCAATATTCCATTTGTGCATTCTATTACTCTGCCAATAGATTC
TGCAGCCCTAGCTGATAAACTGGTCGTTGGTTTGACTATAGACATAGACCGTTTAATACAGATACGTCGTAATCGTCTTA
TTTCCATGAAAAATCAGAGCAACTGCAATTACATAAGCTACGAGCAGGTTGAGCAGGAGATAAGCGAAGTCAACAGAATT
TGTATGAAGAACCAGTGGCCACTAATAGATGTGACACAGAAGTCTATAGAAGAGACGGCTGCAACAATAATTCAGTTCTT
CAATAGGAAGAATAATAAAATTGGGGGAGATGCATTTTGCTAA

Upstream 100 bases:

>100_bases
TTTAGGGTAGGGTGAATTGCCAGAGCGTAGGGGCTTAGCCATGTTAGCACCTATTCGGGTGCATTTTGATATCTGTTTAG
TTTTTAAGTAAGAGTATTTC

Downstream 100 bases:

>100_bases
TCGGGCATACACCATGGAATTTGTTATGTGATCATGGGATGATGTGCCAATCTTGGAAACCGATAGACATACTAAGCCTA
CCGTAATGTTGTGGTGTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MGEKAILDLHLVSDSTCETVVSVARAAVEHFKSLEVNEFVWSLVGSKSHVDRIISSIDRKRNNLIMYTVLDDDLREYLKK
KAEAYNIRCIPILSHIIREISCYLSVAKDPNAHPHRLSDEYFNRIEAINYTIAHDDGQSLWDIDGADIIIVGVSRTSKSP
TSIYLAYRGYKVVNIPFVHSITLPIDSAALADKLVVGLTIDIDRLIQIRRNRLISMKNQSNCNYISYEQVEQEISEVNRI
CMKNQWPLIDVTQKSIEETAATIIQFFNRKNNKIGGDAFC

Sequences:

>Translated_280_residues
MGEKAILDLHLVSDSTCETVVSVARAAVEHFKSLEVNEFVWSLVGSKSHVDRIISSIDRKRNNLIMYTVLDDDLREYLKK
KAEAYNIRCIPILSHIIREISCYLSVAKDPNAHPHRLSDEYFNRIEAINYTIAHDDGQSLWDIDGADIIIVGVSRTSKSP
TSIYLAYRGYKVVNIPFVHSITLPIDSAALADKLVVGLTIDIDRLIQIRRNRLISMKNQSNCNYISYEQVEQEISEVNRI
CMKNQWPLIDVTQKSIEETAATIIQFFNRKNNKIGGDAFC
>Mature_279_residues
GEKAILDLHLVSDSTCETVVSVARAAVEHFKSLEVNEFVWSLVGSKSHVDRIISSIDRKRNNLIMYTVLDDDLREYLKKK
AEAYNIRCIPILSHIIREISCYLSVAKDPNAHPHRLSDEYFNRIEAINYTIAHDDGQSLWDIDGADIIIVGVSRTSKSPT
SIYLAYRGYKVVNIPFVHSITLPIDSAALADKLVVGLTIDIDRLIQIRRNRLISMKNQSNCNYISYEQVEQEISEVNRIC
MKNQWPLIDVTQKSIEETAATIIQFFNRKNNKIGGDAFC

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=269, Percent_Identity=31.9702602230483, Blast_Score=114, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y961_ANAPZ (Q2GJC2)

Other databases:

- EMBL:   CP000235
- RefSeq:   YP_505529.1
- STRING:   Q2GJC2
- GeneID:   3930215
- GenomeReviews:   CP000235_GR
- KEGG:   aph:APH_0961
- NMPDR:   fig|212042.5.peg.908
- TIGR:   APH_0961
- eggNOG:   COG1806
- HOGENOM:   HBG304855
- OMA:   AMEFAVM
- PhylomeDB:   Q2GJC2
- ProtClustDB:   PRK05339
- BioCyc:   APHA212042:APH_0961-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 31862; Mature: 31731

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEKAILDLHLVSDSTCETVVSVARAAVEHFKSLEVNEFVWSLVGSKSHVDRIISSIDRK
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHC
RNNLIMYTVLDDDLREYLKKKAEAYNIRCIPILSHIIREISCYLSVAKDPNAHPHRLSDE
CCCEEEEEEECHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
YFNRIEAINYTIAHDDGQSLWDIDGADIIIVGVSRTSKSPTSIYLAYRGYKVVNIPFVHS
HHHHHHHHEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCEEEEEEECEEEEEECEEEE
ITLPIDSAALADKLVVGLTIDIDRLIQIRRNRLISMKNQSNCNYISYEQVEQEISEVNRI
EECCCCHHHHHHHEEEEEEECHHHHHHHHHHHEEEECCCCCCCEECHHHHHHHHHHHHHH
CMKNQWPLIDVTQKSIEETAATIIQFFNRKNNKIGGDAFC
HHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GEKAILDLHLVSDSTCETVVSVARAAVEHFKSLEVNEFVWSLVGSKSHVDRIISSIDRK
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHC
RNNLIMYTVLDDDLREYLKKKAEAYNIRCIPILSHIIREISCYLSVAKDPNAHPHRLSDE
CCCEEEEEEECHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
YFNRIEAINYTIAHDDGQSLWDIDGADIIIVGVSRTSKSPTSIYLAYRGYKVVNIPFVHS
HHHHHHHHEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCEEEEEEECEEEEEECEEEE
ITLPIDSAALADKLVVGLTIDIDRLIQIRRNRLISMKNQSNCNYISYEQVEQEISEVNRI
EECCCCHHHHHHHEEEEEEECHHHHHHHHHHHEEEECCCCCCCEECHHHHHHHHHHHHHH
CMKNQWPLIDVTQKSIEETAATIIQFFNRKNNKIGGDAFC
HHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA