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The map label for this gene is 88607270

Identifier: 88607270

GI number: 88607270

Start: 709047

End: 709883

Strand: Direct

Name: 88607270

Synonym: APH_0688

Alternate gene names: NA

Gene position: 709047-709883 (Clockwise)

Preceding gene: 88607822

Following gene: 88607527

Centisome position: 48.19

GC content: 35.01

Gene sequence:

>837_bases
ATGAAAAACCCAGAACAAACGCTATTATCTCACCTGTCACAAGAAGTTATTACTATTGCTCATTGCTGTAAGATTACTTT
CATGAATGGTACACATGTCTACTTTACTGATTGTGATCACGACTTAACAGTAGATGGTGTTTCATATTTCTCCAATTCCC
ATACCAAGGTAAAACTCATAAGCCATGGCCACGGTAATAGTACTGCACAAATTGAATTTTTGCCGTATGATACCCCGATT
GTTGCAGATGGTAGCCTATTATTTGAATTATATACTGATGCAAAAATTGAAATACTATTAGTAAATTATTCAGATATATC
ACAAGGTTCAATCAGACTATTTATAGGAAAAATCAGGGAAATTTCCTTGCATAATCACCTAATCAACGCATATCTAATAG
GTGATATACATGCACTATACAATAAGGTAGGAAGTGTATTTTCACAACAATGCAGAGCCCAATTCTGCGATAGCTTATGT
AAACTTTCTGCTAGTAAATTCTCTATCTTTAGCACTGTATCTTCTATCTTAGATAAGTATAAAGAATTTGGAGATTCCAC
CCTTACTACTTACGACAACTACTACAAATATGGTTTGGTGACGTTTTTAAGTGGCAACAATAAACAATGTACTTTTGAAA
TACATTCAAATACGGGGACCATCATATCCCTTACTTCATGCACACCTTATCCTATAAGCGTGGACGACCAATATTCGTTA
CTAGCGGGATGTGATAAAAATTTTCGTACATGTATTACAAAATTCCAAAATGCAGTAAACTTCAGAGGAGAACCGCACGT
TCCAGATCCGCATTCGGTATTTCAACCTATAGATTAG

Upstream 100 bases:

>100_bases
ATTATAAAGTGTACTTCTTATCAATCAAGTGTACTTGGCATAATAGCCTTTATGTCTTGATCTTATTTATTTTAGCAAAA
TACAATAACCGAGTTAGACA

Downstream 100 bases:

>100_bases
TCTATTATCAGAAAACGCCATACTTTAATATTGCGGAAAACATTTTAAGGATCTTACTTTTATGGAAGAATAGCATAGGA
AAGGGTAGGTTTTTTAATCC

Product: phage protein

Products: NA

Alternate protein names: Bacteriophage Protein; Gene Transfer Agent-Like Protein; NlpC/P60 Family Phage Cell Wall Peptidase

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKNPEQTLLSHLSQEVITIAHCCKITFMNGTHVYFTDCDHDLTVDGVSYFSNSHTKVKLISHGHGNSTAQIEFLPYDTPI
VADGSLLFELYTDAKIEILLVNYSDISQGSIRLFIGKIREISLHNHLINAYLIGDIHALYNKVGSVFSQQCRAQFCDSLC
KLSASKFSIFSTVSSILDKYKEFGDSTLTTYDNYYKYGLVTFLSGNNKQCTFEIHSNTGTIISLTSCTPYPISVDDQYSL
LAGCDKNFRTCITKFQNAVNFRGEPHVPDPHSVFQPID

Sequences:

>Translated_278_residues
MKNPEQTLLSHLSQEVITIAHCCKITFMNGTHVYFTDCDHDLTVDGVSYFSNSHTKVKLISHGHGNSTAQIEFLPYDTPI
VADGSLLFELYTDAKIEILLVNYSDISQGSIRLFIGKIREISLHNHLINAYLIGDIHALYNKVGSVFSQQCRAQFCDSLC
KLSASKFSIFSTVSSILDKYKEFGDSTLTTYDNYYKYGLVTFLSGNNKQCTFEIHSNTGTIISLTSCTPYPISVDDQYSL
LAGCDKNFRTCITKFQNAVNFRGEPHVPDPHSVFQPID
>Mature_278_residues
MKNPEQTLLSHLSQEVITIAHCCKITFMNGTHVYFTDCDHDLTVDGVSYFSNSHTKVKLISHGHGNSTAQIEFLPYDTPI
VADGSLLFELYTDAKIEILLVNYSDISQGSIRLFIGKIREISLHNHLINAYLIGDIHALYNKVGSVFSQQCRAQFCDSLC
KLSASKFSIFSTVSSILDKYKEFGDSTLTTYDNYYKYGLVTFLSGNNKQCTFEIHSNTGTIISLTSCTPYPISVDDQYSL
LAGCDKNFRTCITKFQNAVNFRGEPHVPDPHSVFQPID

Specific function: Unknown

COG id: COG5449

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31162; Mature: 31162

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNPEQTLLSHLSQEVITIAHCCKITFMNGTHVYFTDCDHDLTVDGVSYFSNSHTKVKLI
CCCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCEECHHHHHCCCCCEEEEE
SHGHGNSTAQIEFLPYDTPIVADGSLLFELYTDAKIEILLVNYSDISQGSIRLFIGKIRE
ECCCCCCEEEEEEEECCCCEEECCCEEEEEECCCEEEEEEEECCCCCCCCEEEEEEHHHE
ISLHNHLINAYLIGDIHALYNKVGSVFSQQCRAQFCDSLCKLSASKFSIFSTVSSILDKY
EHHHHHEEEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KEFGDSTLTTYDNYYKYGLVTFLSGNNKQCTFEIHSNTGTIISLTSCTPYPISVDDQYSL
HHHCCCEEEECCCEEEEEEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCHH
LAGCDKNFRTCITKFQNAVNFRGEPHVPDPHSVFQPID
HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MKNPEQTLLSHLSQEVITIAHCCKITFMNGTHVYFTDCDHDLTVDGVSYFSNSHTKVKLI
CCCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCEECHHHHHCCCCCEEEEE
SHGHGNSTAQIEFLPYDTPIVADGSLLFELYTDAKIEILLVNYSDISQGSIRLFIGKIRE
ECCCCCCEEEEEEEECCCCEEECCCEEEEEECCCEEEEEEEECCCCCCCCEEEEEEHHHE
ISLHNHLINAYLIGDIHALYNKVGSVFSQQCRAQFCDSLCKLSASKFSIFSTVSSILDKY
EHHHHHEEEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KEFGDSTLTTYDNYYKYGLVTFLSGNNKQCTFEIHSNTGTIISLTSCTPYPISVDDQYSL
HHHCCCEEEECCCEEEEEEEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCHH
LAGCDKNFRTCITKFQNAVNFRGEPHVPDPHSVFQPID
HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA