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The map label for this gene is ccmH [C]

Identifier: 88607822

GI number: 88607822

Start: 706914

End: 707321

Strand: Direct

Name: ccmH [C]

Synonym: APH_0687

Alternate gene names: 88607822

Gene position: 706914-707321 (Clockwise)

Preceding gene: 88606816

Following gene: 88607270

Centisome position: 48.05

GC content: 38.97

Gene sequence:

>408_bases
GTGAAGCGGTTGATATTTATTTTTTTACTTTTTATTTCGTTTGCTCAAAACGGAGTAAACAACGCGTTTTCTGCAAATGA
GGACTTCCTATCTAAGGACCAGGAGTCGCGAGCCATAAAGCTCTTTAAGGCGACAAAATGCATGACTTGCTCGGGAGAGT
CCTTATATGAGTCGCAATCTGCATTTGCGGTTGAAATGCGCTCTTTTATAAGACGTCAAATCGTAAGTGGTATGACTGAT
GAACAGATTTTAGATATCCTAAAACAGCGTTATGGAAGCGCAATTCTTGGTGATACACCATACAATGCTGATACATATTT
TTTATGGATTACTCCTATATTTCTTGCGGTAATTATCACAGTGTTCATGGCACTAAAACTTGGGCGGCTAAAAAAATCTG
CGCAGTAA

Upstream 100 bases:

>100_bases
TGATACCCACTAATATGAGCATTACTGTCTTAAAGGTAGGTTCTTTAAGCCATGCGTTATACACTATAGCAGTATTTATT
CCAGTAGTTTAGCTATAGCT

Downstream 100 bases:

>100_bases
AAGCTTTACCTAGGTAAGATGGTATATATTCTCGTGATATAGGAGAGGAGGGCGTGTCGCATTCACATATATAGTAAACT
CCTGCAATATAAGCGCACAA

Product: cytochrome c biogenesis family protein

Products: NA

Alternate protein names: Cytochrome C-Type Biogenesis Protein CcmH; Cytochrome C-Type Biogenesis Protein CycL; Cytochrome C Biogenesis Family Protein; Cytochrome C-Type Biogenesis Protein

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKRLIFIFLLFISFAQNGVNNAFSANEDFLSKDQESRAIKLFKATKCMTCSGESLYESQSAFAVEMRSFIRRQIVSGMTD
EQILDILKQRYGSAILGDTPYNADTYFLWITPIFLAVIITVFMALKLGRLKKSAQ

Sequences:

>Translated_135_residues
MKRLIFIFLLFISFAQNGVNNAFSANEDFLSKDQESRAIKLFKATKCMTCSGESLYESQSAFAVEMRSFIRRQIVSGMTD
EQILDILKQRYGSAILGDTPYNADTYFLWITPIFLAVIITVFMALKLGRLKKSAQ
>Mature_135_residues
MKRLIFIFLLFISFAQNGVNNAFSANEDFLSKDQESRAIKLFKATKCMTCSGESLYESQSAFAVEMRSFIRRQIVSGMTD
EQILDILKQRYGSAILGDTPYNADTYFLWITPIFLAVIITVFMALKLGRLKKSAQ

Specific function: May Be Required For The Biogenesis Of C-Type Cytochromes. Possible Subunit Of A Heme Lyase. [C]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15358; Mature: 15358

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIFIFLLFISFAQNGVNNAFSANEDFLSKDQESRAIKLFKATKCMTCSGESLYESQS
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
AFAVEMRSFIRRQIVSGMTDEQILDILKQRYGSAILGDTPYNADTYFLWITPIFLAVIIT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHH
VFMALKLGRLKKSAQ
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRLIFIFLLFISFAQNGVNNAFSANEDFLSKDQESRAIKLFKATKCMTCSGESLYESQS
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
AFAVEMRSFIRRQIVSGMTDEQILDILKQRYGSAILGDTPYNADTYFLWITPIFLAVIIT
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHH
VFMALKLGRLKKSAQ
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA