Click here to switch to the map view.

The map label for this gene is 88607162

Identifier: 88607162

GI number: 88607162

Start: 932795

End: 934054

Strand: Direct

Name: 88607162

Synonym: APH_0878

Alternate gene names: NA

Gene position: 932795-934054 (Clockwise)

Preceding gene: 88606952

Following gene: 88606912

Centisome position: 63.4

GC content: 39.29

Gene sequence:

>1260_bases
ATGGCTATCATACGAAAGGATTCCCCTCTTATGCCCATTAGACATTCTCAAGGAATTTTCTGGGCTGCAGCGGTGATGAT
GTTACTATCAATATGCTGTTTTGAGTGGATGTACACAGCTTTTGGTCAAGAAGTACTTCACAGTGAAGTTAGAGTTGCCA
CACTGTTGTTCACGCACATGTGCCTTTTCTCTGTGTTTCAACTTTTCTCAGGTTCTATTATCGACTACGCAGGATCCAAG
CTTTCCTTACCTTCAGCAGCTTTGTGTGTTTTCATTGGCATGGTACTACAGATATACACTGATGATCTCAATTTTCCTAT
CATGCTTACAGTTTCGCAGTTTTTTTTAACATTCGGAGCGTCATTTGCTTTTATAGGGATTGGATACCTATGCAATGGAT
TTTTTAAAGAATCTATTGCAGGAATTATGTTTGGCTTTGCTCAAGCAAGCTACAGCATGTGCTACGCCATAGTTTGGTAT
ATTTCTACATATTATGAACAATTTTTAAAGCAAAACTTTAATTTTCTGGTATGGTCAATAGCAGCTTTTCAATTTACGGT
ATTTATTACAATCTTATGCACTGCTAGTAATCCTGCAGTGTATTGCTCAGCGAAAAAGAACATAAAATTCTCAGACATAC
TTAGCTCTATATACAAGATGCTATTTAACTCTAGAGTAGTATTAGTGTCTCTAATAGGAGGTATGGAGTTTGGAATATTT
TTCTCTGTCGCAGGAGTTTTATTATACAAAGCAAGCGCAACACTAGGTAGTGTGGCATCCTTATGCATGTGGACAGGCTT
CGCTATAGGAGCTCCCTTTTTCTGCTGGGCTTATTCTTCTTTCCTCAAAGTAAAAAGTAAGCATATTTTTTGGGGATCCA
GTTTGCTTCAAAGCGGCAGCTTACTGCTAGTCACTACATTAATACAGGCTGTCGAAGCATTACATCCTGAAAAAAACTGG
GTAGCCTATGCGGCTTGCCTCGTGGCAAGTATCTTCGGTTTTGCCTCTGGAGGACACATGGTAGCATTCTCTGCAGGAAG
AGAGTTGGTAGATATAAGACTAATCACCACGTACTGCGCTTTTGTCAATGGGTGCATGTGCGTGCTTTCTGGGATAATTG
TGTTGATTTTAACTCTGCTATCTCAATTCTACAGGTTATCAGACATGCTAGTAGTTATGTCTGTAGTGGCCTTACTTTAC
TATCTCCTGGTTAATTTCATGCTATATACACGCTCTCCTCGTAGTAATGAAAATAGATGA

Upstream 100 bases:

>100_bases
CTGCAAATCGTGAATACATACTATATATTCTGCGCTTACCGTGGAAAGTAGCATGAGTACTTTTCACAGGTTCGGATTTT
TTACAAAAAAGCTAAGATTT

Downstream 100 bases:

>100_bases
TCATCCAAAAAACTTCCCGACAATTGTTGCGTATACCTGCTCCAGAGTTCTACTACTTGAACATCTATCTGGCTCGTAAT
GATAAATACCGCTAATAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Family Transporter

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MAIIRKDSPLMPIRHSQGIFWAAAVMMLLSICCFEWMYTAFGQEVLHSEVRVATLLFTHMCLFSVFQLFSGSIIDYAGSK
LSLPSAALCVFIGMVLQIYTDDLNFPIMLTVSQFFLTFGASFAFIGIGYLCNGFFKESIAGIMFGFAQASYSMCYAIVWY
ISTYYEQFLKQNFNFLVWSIAAFQFTVFITILCTASNPAVYCSAKKNIKFSDILSSIYKMLFNSRVVLVSLIGGMEFGIF
FSVAGVLLYKASATLGSVASLCMWTGFAIGAPFFCWAYSSFLKVKSKHIFWGSSLLQSGSLLLVTTLIQAVEALHPEKNW
VAYAACLVASIFGFASGGHMVAFSAGRELVDIRLITTYCAFVNGCMCVLSGIIVLILTLLSQFYRLSDMLVVMSVVALLY
YLLVNFMLYTRSPRSNENR

Sequences:

>Translated_419_residues
MAIIRKDSPLMPIRHSQGIFWAAAVMMLLSICCFEWMYTAFGQEVLHSEVRVATLLFTHMCLFSVFQLFSGSIIDYAGSK
LSLPSAALCVFIGMVLQIYTDDLNFPIMLTVSQFFLTFGASFAFIGIGYLCNGFFKESIAGIMFGFAQASYSMCYAIVWY
ISTYYEQFLKQNFNFLVWSIAAFQFTVFITILCTASNPAVYCSAKKNIKFSDILSSIYKMLFNSRVVLVSLIGGMEFGIF
FSVAGVLLYKASATLGSVASLCMWTGFAIGAPFFCWAYSSFLKVKSKHIFWGSSLLQSGSLLLVTTLIQAVEALHPEKNW
VAYAACLVASIFGFASGGHMVAFSAGRELVDIRLITTYCAFVNGCMCVLSGIIVLILTLLSQFYRLSDMLVVMSVVALLY
YLLVNFMLYTRSPRSNENR
>Mature_418_residues
AIIRKDSPLMPIRHSQGIFWAAAVMMLLSICCFEWMYTAFGQEVLHSEVRVATLLFTHMCLFSVFQLFSGSIIDYAGSKL
SLPSAALCVFIGMVLQIYTDDLNFPIMLTVSQFFLTFGASFAFIGIGYLCNGFFKESIAGIMFGFAQASYSMCYAIVWYI
STYYEQFLKQNFNFLVWSIAAFQFTVFITILCTASNPAVYCSAKKNIKFSDILSSIYKMLFNSRVVLVSLIGGMEFGIFF
SVAGVLLYKASATLGSVASLCMWTGFAIGAPFFCWAYSSFLKVKSKHIFWGSSLLQSGSLLLVTTLIQAVEALHPEKNWV
AYAACLVASIFGFASGGHMVAFSAGRELVDIRLITTYCAFVNGCMCVLSGIIVLILTLLSQFYRLSDMLVVMSVVALLYY
LLVNFMLYTRSPRSNENR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46632; Mature: 46501

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AIIRKDSPLMPIRHSQGIFWAAAVMMLLSICCFEWMYTAFGQEVLHSEVRVATLLFTHM
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLFSVFQLFSGSIIDYAGSKLSLPSAALCVFIGMVLQIYTDDLNFPIMLTVSQFFLTFGA
HHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
SFAFIGIGYLCNGFFKESIAGIMFGFAQASYSMCYAIVWYISTYYEQFLKQNFNFLVWSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AAFQFTVFITILCTASNPAVYCSAKKNIKFSDILSSIYKMLFNSRVVLVSLIGGMEFGIF
HHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHH
FSVAGVLLYKASATLGSVASLCMWTGFAIGAPFFCWAYSSFLKVKSKHIFWGSSLLQSGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECHHHHHCCC
LLLVTTLIQAVEALHPEKNWVAYAACLVASIFGFASGGHMVAFSAGRELVDIRLITTYCA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH
FVNGCMCVLSGIIVLILTLLSQFYRLSDMLVVMSVVALLYYLLVNFMLYTRSPRSNENR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA