| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
Click here to switch to the map view.
The map label for this gene is 88606912
Identifier: 88606912
GI number: 88606912
Start: 935172
End: 935423
Strand: Direct
Name: 88606912
Synonym: APH_0879
Alternate gene names: NA
Gene position: 935172-935423 (Clockwise)
Preceding gene: 88607162
Following gene: 88607092
Centisome position: 63.56
GC content: 50.79
Gene sequence:
>252_bases GTGACTCTTGGGTGCTTGCATGCTGCGCGGGAAGCTCTTGATAGAGTAGATACGTCTGACTTACCGAACCGCTGTCATAC CAAGGCGCGAACTAGGCTTCGTAACGGAATCATGCAAGCTTCCGAGCATTGCATCGTAGAACAGGCCGCTGAACCTGATC TGCTTGAGCCAGCGCATGGTTCAAGATGGGATGACCTGTCGGTTGAAGAATCGGCATCAACCCCTGCTAATACAACTTCT TTATACCTTTAG
Upstream 100 bases:
>100_bases CTGCAAGGATGATTGCTAACTTCTGCCAGTTGAATTGCCATAATCGTATACTGCATCCAGTAGTGATATCGGTGCATCCA TGGCAGAAGTAACTCATTGA
Downstream 100 bases:
>100_bases TAGTTGTAGAGCTTTTTATGGCAAGCCGTTCCCTCCCTACTCAGTATCCCCCATAAAAGCAATACTAATGAGCGACAATA TCGCAACCAAAGAACAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MTLGCLHAAREALDRVDTSDLPNRCHTKARTRLRNGIMQASEHCIVEQAAEPDLLEPAHGSRWDDLSVEESASTPANTTS LYL
Sequences:
>Translated_83_residues MTLGCLHAAREALDRVDTSDLPNRCHTKARTRLRNGIMQASEHCIVEQAAEPDLLEPAHGSRWDDLSVEESASTPANTTS LYL >Mature_82_residues TLGCLHAAREALDRVDTSDLPNRCHTKARTRLRNGIMQASEHCIVEQAAEPDLLEPAHGSRWDDLSVEESASTPANTTSL YL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9145; Mature: 9014
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLGCLHAAREALDRVDTSDLPNRCHTKARTRLRNGIMQASEHCIVEQAAEPDLLEPAHG CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SRWDDLSVEESASTPANTTSLYL CCCCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure TLGCLHAAREALDRVDTSDLPNRCHTKARTRLRNGIMQASEHCIVEQAAEPDLLEPAHG CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SRWDDLSVEESASTPANTTSLYL CCCCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA