Definition Anaplasma phagocytophilum HZ, complete genome.
Accession NC_007797
Length 1,471,282

Click here to switch to the map view.

The map label for this gene is 88606912

Identifier: 88606912

GI number: 88606912

Start: 935172

End: 935423

Strand: Direct

Name: 88606912

Synonym: APH_0879

Alternate gene names: NA

Gene position: 935172-935423 (Clockwise)

Preceding gene: 88607162

Following gene: 88607092

Centisome position: 63.56

GC content: 50.79

Gene sequence:

>252_bases
GTGACTCTTGGGTGCTTGCATGCTGCGCGGGAAGCTCTTGATAGAGTAGATACGTCTGACTTACCGAACCGCTGTCATAC
CAAGGCGCGAACTAGGCTTCGTAACGGAATCATGCAAGCTTCCGAGCATTGCATCGTAGAACAGGCCGCTGAACCTGATC
TGCTTGAGCCAGCGCATGGTTCAAGATGGGATGACCTGTCGGTTGAAGAATCGGCATCAACCCCTGCTAATACAACTTCT
TTATACCTTTAG

Upstream 100 bases:

>100_bases
CTGCAAGGATGATTGCTAACTTCTGCCAGTTGAATTGCCATAATCGTATACTGCATCCAGTAGTGATATCGGTGCATCCA
TGGCAGAAGTAACTCATTGA

Downstream 100 bases:

>100_bases
TAGTTGTAGAGCTTTTTATGGCAAGCCGTTCCCTCCCTACTCAGTATCCCCCATAAAAGCAATACTAATGAGCGACAATA
TCGCAACCAAAGAACAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MTLGCLHAAREALDRVDTSDLPNRCHTKARTRLRNGIMQASEHCIVEQAAEPDLLEPAHGSRWDDLSVEESASTPANTTS
LYL

Sequences:

>Translated_83_residues
MTLGCLHAAREALDRVDTSDLPNRCHTKARTRLRNGIMQASEHCIVEQAAEPDLLEPAHGSRWDDLSVEESASTPANTTS
LYL
>Mature_82_residues
TLGCLHAAREALDRVDTSDLPNRCHTKARTRLRNGIMQASEHCIVEQAAEPDLLEPAHGSRWDDLSVEESASTPANTTSL
YL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9145; Mature: 9014

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLGCLHAAREALDRVDTSDLPNRCHTKARTRLRNGIMQASEHCIVEQAAEPDLLEPAHG
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SRWDDLSVEESASTPANTTSLYL
CCCCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure 
TLGCLHAAREALDRVDTSDLPNRCHTKARTRLRNGIMQASEHCIVEQAAEPDLLEPAHG
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SRWDDLSVEESASTPANTTSLYL
CCCCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA