Click here to switch to the map view.

The map label for this gene is oxaA [H]

Identifier: 88607139

GI number: 88607139

Start: 561872

End: 562240

Strand: Direct

Name: oxaA [H]

Synonym: APH_0541

Alternate gene names: 88607139

Gene position: 561872-562240 (Clockwise)

Preceding gene: 88606848

Following gene: 88607917

Centisome position: 38.19

GC content: 35.5

Gene sequence:

>369_bases
ATGGGAGCAAAAGAGTTAGAGCTCTTGGATCAATATAAGGATACGCTAAATATACCAATGTTCGATAAGGCAGTAGACTT
TGGCATGTTATATTTTATTACAAAGCCTGTATTTTTACTGTTGCAGTACTTTCATAAGCTGCTAGGAAATTTTGGTTTAG
CGATCGTAATGTTAACGGTAGCTATCAAGTTAGTAGCCTTTCCTCTATCGATGAGGTCATACGTTTCAATGTTTAAGCTC
AAGAGGCTACAGCCAGAGGTTTTAAGAATAAAGGAACTGTATAAAACCGATGACCTTAGAATTAGTAAGGAGATAGCTTC
TTTATTTAAGAAGCATAAGGTTAGTCCTGTTAATGAATTTCCTCTGTAA

Upstream 100 bases:

>100_bases
AGCTTGCTCTAAGCTATGAGCCCATATCGCGTATGGCCAATGTAAATCGCATGGTGCAATAGGAGCACATGATAAGGTAG
AGGCGGTAACGCATCTATTT

Downstream 100 bases:

>100_bases
GTTCTTTAGATATAGAAAGTTCAGACGCCAGAATGTATCGATATTTGCTAGAAATAGCGGCGCATTTTCGCAGAAATATC
TTGTAGAGTCCGTAGACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MGAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGNFGLAIVMLTVAIKLVAFPLSMRSYVSMFKL
KRLQPEVLRIKELYKTDDLRISKEIASLFKKHKVSPVNEFPL

Sequences:

>Translated_122_residues
MGAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGNFGLAIVMLTVAIKLVAFPLSMRSYVSMFKL
KRLQPEVLRIKELYKTDDLRISKEIASLFKKHKVSPVNEFPL
>Mature_121_residues
GAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGNFGLAIVMLTVAIKLVAFPLSMRSYVSMFKLK
RLQPEVLRIKELYKTDDLRISKEIASLFKKHKVSPVNEFPL

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=105, Percent_Identity=39.0476190476191, Blast_Score=94, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 14203; Mature: 14072

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGNFGLAIVMLTV
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIKLVAFPLSMRSYVSMFKLKRLQPEVLRIKELYKTDDLRISKEIASLFKKHKVSPVNEF
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
PL
CC
>Mature Secondary Structure 
GAKELELLDQYKDTLNIPMFDKAVDFGMLYFITKPVFLLLQYFHKLLGNFGLAIVMLTV
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIKLVAFPLSMRSYVSMFKLKRLQPEVLRIKELYKTDDLRISKEIASLFKKHKVSPVNEF
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
PL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA