| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607077
Identifier: 88607077
GI number: 88607077
Start: 950535
End: 951143
Strand: Reverse
Name: 88607077
Synonym: APH_0894
Alternate gene names: NA
Gene position: 951143-950535 (Counterclockwise)
Preceding gene: 88607235
Following gene: 88607782
Centisome position: 64.65
GC content: 45.98
Gene sequence:
>609_bases ATGTCCAGAGAGGAGATTGGTCAATTTTTTGTTCGTTTCAAAGGGGCAATAATGGGTGTGGTACTGTTGGCATTATGTGC CTCAGGTATTGCGTTCTTCCTTGATAGCAGAAGCGAGAAGCAACGCATCAAAGATGGAGATGCCATTTATGATGTTTTGC GTCGAAATGATGGGTCTGTAGAGCAGAGGCTAGCCGAGGTTTCTAATACGTCTAAGGGTATAGTTGCGCGTTTGGCGAAG TTTAAGCTTGCGGCAGGACATGTGAGAAGCGGTAGTGTGGTATCTGCTAAGGAGTTGTACTACGATCTTGCTGCGGATAC AGGGTTAACGCGGGAGTTACGGGAGCTAGCTGAGTATTTTGCAATTGTGCTTTCACTGGATGGAGAAGATATAGATGAGG CATTAGAAGAGAGGCTTGTGCGGCTTGCTTCGGGGAAGGATTCCATATACCGGTCGTCTGCGAAAGAAGCGCTTATTGTT TCCGAGCTTAGGAAGAATGACGTAGATGCTGCGGTATTGGTCATGAAAGAAGTTCTGGGTGATCCCGCTTTAAATATGGA GATAAGGAGAAACGTTGAGGGTCTATTGAGAGTATATGGCCATAAGTAA
Upstream 100 bases:
>100_bases CGCTATTATAAGCTAAAAGATTGGATGGATTTCGAGTCTAAAGTTATTGACTGTGTGTACTCATACCCTTACATTATGGG CTAATTTGCGGGGGGCGAAT
Downstream 100 bases:
>100_bases AGTTTTCATGCCTCTAATCCTTGAAACAAGGGTATTGAATGATTAGTTAGAGGTAAGATTCGGTTTGTAGTGTCGTGGAG TTTGTTGTGGCGGATATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSREEIGQFFVRFKGAIMGVVLLALCASGIAFFLDSRSEKQRIKDGDAIYDVLRRNDGSVEQRLAEVSNTSKGIVARLAK FKLAAGHVRSGSVVSAKELYYDLAADTGLTRELRELAEYFAIVLSLDGEDIDEALEERLVRLASGKDSIYRSSAKEALIV SELRKNDVDAAVLVMKEVLGDPALNMEIRRNVEGLLRVYGHK
Sequences:
>Translated_202_residues MSREEIGQFFVRFKGAIMGVVLLALCASGIAFFLDSRSEKQRIKDGDAIYDVLRRNDGSVEQRLAEVSNTSKGIVARLAK FKLAAGHVRSGSVVSAKELYYDLAADTGLTRELRELAEYFAIVLSLDGEDIDEALEERLVRLASGKDSIYRSSAKEALIV SELRKNDVDAAVLVMKEVLGDPALNMEIRRNVEGLLRVYGHK >Mature_201_residues SREEIGQFFVRFKGAIMGVVLLALCASGIAFFLDSRSEKQRIKDGDAIYDVLRRNDGSVEQRLAEVSNTSKGIVARLAKF KLAAGHVRSGSVVSAKELYYDLAADTGLTRELRELAEYFAIVLSLDGEDIDEALEERLVRLASGKDSIYRSSAKEALIVS ELRKNDVDAAVLVMKEVLGDPALNMEIRRNVEGLLRVYGHK
Specific function: Unknown
COG id: COG4649
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22340; Mature: 22209
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSREEIGQFFVRFKGAIMGVVLLALCASGIAFFLDSRSEKQRIKDGDAIYDVLRRNDGSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCHH EQRLAEVSNTSKGIVARLAKFKLAAGHVRSGSVVSAKELYYDLAADTGLTRELRELAEYF HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH AIVLSLDGEDIDEALEERLVRLASGKDSIYRSSAKEALIVSELRKNDVDAAVLVMKEVLG HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC DPALNMEIRRNVEGLLRVYGHK CCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SREEIGQFFVRFKGAIMGVVLLALCASGIAFFLDSRSEKQRIKDGDAIYDVLRRNDGSV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCHH EQRLAEVSNTSKGIVARLAKFKLAAGHVRSGSVVSAKELYYDLAADTGLTRELRELAEYF HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH AIVLSLDGEDIDEALEERLVRLASGKDSIYRSSAKEALIVSELRKNDVDAAVLVMKEVLG HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC DPALNMEIRRNVEGLLRVYGHK CCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA