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The map label for this gene is yfhF [C]

Identifier: 88607054

GI number: 88607054

Start: 697239

End: 697604

Strand: Direct

Name: yfhF [C]

Synonym: APH_0676

Alternate gene names: 88607054

Gene position: 697239-697604 (Clockwise)

Preceding gene: 88607576

Following gene: 88607791

Centisome position: 47.39

GC content: 40.16

Gene sequence:

>366_bases
ATGGATGATAAAGGCAGGGAGGTTCCTGTTGTTATTACTGATGCCGCGCTCCGTAGAATGAAGGAATTACTGCTTGCTAA
GGGGGATGAAGCAGAGAATGTTGCGATACGTATATTGATCAAGCAGAAGGGGTGTTATGGTCTGAAATATCACATAGAGT
ATGCTTATGATGTAAGACCACTGGAAGTGAAGGTAGAAAAAGTCATTGATGAGTTCAGTGTTACCATACTCATAGAACCA
AAGGCTATGATGTTCATTCGTGGCACTGTGATAGACTATTATAGCGATAAACTGTCGTCAGGTTTTACTTTTAAAAACCC
CAATGAAAAAGGAAGATGTGGGTGTGGAGAAAGTTTTTATGTCTGA

Upstream 100 bases:

>100_bases
TCTATATTGGCTGAAGATGCTGTGAAGGCTGCTATTAATGATTATCGTAAAAAGCAAGAAGCGGTAGGCAATTAATATGG
ATAATAGCGCTGTTCAGAAT

Downstream 100 bases:

>100_bases
TGATTATTTTGCCCTGCTTAATCTGGGTGATGTGAGTTTTTCCATTGATCTTGCGCTTTTAGAGAAGAATTATATAGAAA
TACAGAGAAATTCTCATCCG

Product: iron-sulfur cluster assembly accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MDDKGREVPVVITDAALRRMKELLLAKGDEAENVAIRILIKQKGCYGLKYHIEYAYDVRPLEVKVEKVIDEFSVTILIEP
KAMMFIRGTVIDYYSDKLSSGFTFKNPNEKGRCGCGESFYV

Sequences:

>Translated_121_residues
MDDKGREVPVVITDAALRRMKELLLAKGDEAENVAIRILIKQKGCYGLKYHIEYAYDVRPLEVKVEKVIDEFSVTILIEP
KAMMFIRGTVIDYYSDKLSSGFTFKNPNEKGRCGCGESFYV
>Mature_121_residues
MDDKGREVPVVITDAALRRMKELLLAKGDEAENVAIRILIKQKGCYGLKYHIEYAYDVRPLEVKVEKVIDEFSVTILIEP
KAMMFIRGTVIDYYSDKLSSGFTFKNPNEKGRCGCGESFYV

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=112, Percent_Identity=41.0714285714286, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788877, Length=114, Percent_Identity=30.7017543859649, Blast_Score=79, Evalue=1e-16,
Organism=Escherichia coli, GI1786351, Length=114, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25146411, Length=114, Percent_Identity=42.9824561403509, Blast_Score=98, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI193209025, Length=114, Percent_Identity=42.9824561403509, Blast_Score=98, Evalue=9e-22,
Organism=Saccharomyces cerevisiae, GI6323001, Length=112, Percent_Identity=37.5, Blast_Score=84, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24642263, Length=121, Percent_Identity=39.6694214876033, Blast_Score=86, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 13790; Mature: 13790

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDKGREVPVVITDAALRRMKELLLAKGDEAENVAIRILIKQKGCYGLKYHIEYAYDVRP
CCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCC
LEVKVEKVIDEFSVTILIEPKAMMFIRGTVIDYYSDKLSSGFTFKNPNEKGRCGCGESFY
CEEHHHHHHCCCEEEEEECCCEEEEEEEEEEEHHHHHHCCCCEECCCCCCCCCCCCCCCC
V
C
>Mature Secondary Structure
MDDKGREVPVVITDAALRRMKELLLAKGDEAENVAIRILIKQKGCYGLKYHIEYAYDVRP
CCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCC
LEVKVEKVIDEFSVTILIEPKAMMFIRGTVIDYYSDKLSSGFTFKNPNEKGRCGCGESFY
CEEHHHHHHCCCEEEEEECCCEEEEEEEEEEEHHHHHHCCCCEECCCCCCCCCCCCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]