Click here to switch to the map view.

The map label for this gene is hscB [H]

Identifier: 88607791

GI number: 88607791

Start: 697597

End: 698037

Strand: Direct

Name: hscB [H]

Synonym: APH_0677

Alternate gene names: 88607791

Gene position: 697597-698037 (Clockwise)

Preceding gene: 88607054

Following gene: 88607180

Centisome position: 47.41

GC content: 41.5

Gene sequence:

>441_bases
ATGTCTGATGATTATTTTGCCCTGCTTAATCTGGGTGATGTGAGTTTTTCCATTGATCTTGCGCTTTTAGAGAAGAATTA
TATAGAAATACAGAGAAATTCTCATCCGGACCGTTTTTTCTTTATTAAAGACAAAGAATCCGCTGTAAGGCACATTGCGA
AAGTTAATAAAGCTTATTTGGTGCTAAAATCGCCTATAGCACGTGCGGAATACATATTGGCAGAGAAGGGAGTGAAGTTA
AGCGCGGAAGATCGCAAAAAGATTGTCGAAGAGGTATTTGATTTAGATCTCACGGAAGCAGGGGTGCAAGAAGCTGTAGG
TGAGTGTTGGGAGCTTGTAGAGAATGCTTTTGCTTCTGGTGATATGTATGCAGCGGCAATGCAAGTTGAGAAGCTAAAGT
ACTTAAGGGGCGTAGAGAGGGGAACGAAAGGATGCAGTTAG

Upstream 100 bases:

>100_bases
CGTGGCACTGTGATAGACTATTATAGCGATAAACTGTCGTCAGGTTTTACTTTTAAAAACCCCAATGAAAAAGGAAGATG
TGGGTGTGGAGAAAGTTTTT

Downstream 100 bases:

>100_bases
TGGATATAGTTGAGCCAGATGTTCCTAATGCGGATAGTGTGGCATTTGGTATAGATTTAGGGACCACGCATTCGTTAGTA
GCCAGGATGGAAAATGGGCA

Product: co-chaperone protein hscB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSDDYFALLNLGDVSFSIDLALLEKNYIEIQRNSHPDRFFFIKDKESAVRHIAKVNKAYLVLKSPIARAEYILAEKGVKL
SAEDRKKIVEEVFDLDLTEAGVQEAVGECWELVENAFASGDMYAAAMQVEKLKYLRGVERGTKGCS

Sequences:

>Translated_146_residues
MSDDYFALLNLGDVSFSIDLALLEKNYIEIQRNSHPDRFFFIKDKESAVRHIAKVNKAYLVLKSPIARAEYILAEKGVKL
SAEDRKKIVEEVFDLDLTEAGVQEAVGECWELVENAFASGDMYAAAMQVEKLKYLRGVERGTKGCS
>Mature_145_residues
SDDYFALLNLGDVSFSIDLALLEKNYIEIQRNSHPDRFFFIKDKESAVRHIAKVNKAYLVLKSPIARAEYILAEKGVKLS
AEDRKKIVEEVFDLDLTEAGVQEAVGECWELVENAFASGDMYAAAMQVEKLKYLRGVERGTKGCS

Specific function: Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward hscA [H]

COG id: COG1076

COG function: function code O; DnaJ-domain-containing proteins 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR009073
- InterPro:   IPR004640 [H]

Pfam domain/function: PF00226 DnaJ; PF07743 HSCB_C [H]

EC number: NA

Molecular weight: Translated: 16456; Mature: 16325

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDYFALLNLGDVSFSIDLALLEKNYIEIQRNSHPDRFFFIKDKESAVRHIAKVNKAYL
CCCCEEEEEEECCCEEEEHHEEECCCCEEEECCCCCCEEEEEECHHHHHHHHHHHHHHEE
VLKSPIARAEYILAEKGVKLSAEDRKKIVEEVFDLDLTEAGVQEAVGECWELVENAFASG
EEECCHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
DMYAAAMQVEKLKYLRGVERGTKGCS
CHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDDYFALLNLGDVSFSIDLALLEKNYIEIQRNSHPDRFFFIKDKESAVRHIAKVNKAYL
CCCEEEEEEECCCEEEEHHEEECCCCEEEECCCCCCEEEEEECHHHHHHHHHHHHHHEE
VLKSPIARAEYILAEKGVKLSAEDRKKIVEEVFDLDLTEAGVQEAVGECWELVENAFASG
EEECCHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
DMYAAAMQVEKLKYLRGVERGTKGCS
CHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA