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The map label for this gene is 88607007

Identifier: 88607007

GI number: 88607007

Start: 1271757

End: 1273019

Strand: Reverse

Name: 88607007

Synonym: APH_1205

Alternate gene names: NA

Gene position: 1273019-1271757 (Counterclockwise)

Preceding gene: 88607678

Following gene: 88607714

Centisome position: 86.52

GC content: 41.01

Gene sequence:

>1263_bases
ATGGTAGCTGTTCATGCTTTGGGTATATCGGGGATTTTATCCATATTGATTGTATTTCTCAGGATGCCATTTCTGAAATC
TGTGATTCCTGAACCAGATAGGATATTTGACCTATCTCTGGTAATACATGTTAACTTTTCAGTATTGGTATGGCTATGTT
CTATATCTTCTATATTGATAAGTATGGCCGTTCAGGAGAAAACAAAATTTTTTAGCTATACCTGGGGATTATCTGCAGTG
GGTACTGTACTTATAGCGCTATCAGCCATAAGCAAGGATTCTATACCGATTAAGAGTAACTACATACCGGTTATAGATAA
CAGCACTTTTTTTGTAGGCTTAACCCTATTTTTTGCAGGTGTTGTACTAAATACTTTGCCTCTACTCTACCGCAGGAATG
CTCTCACTTCATCTCCTATATCGGCTGGGGTATATGGGATATCTGCAATGCTTACAGCGGTTCTTATATGCTTTACTTCG
GCGCATGCTGTTACAAGTAACACAACAGACCGTTTATATTTCTACGAACAGATATTTTGGGGTGCGGGGCACATGCTACA
GGGTGTCTTCAGTCAGGCTTTTCTTGTGGTTTTGCTACTTGAAATGAAAAATTGCAAATTGACACATCCATACTTACTGA
GCGCGGTGTTTCTATTAAACACAGCATCTATTCTTATAGCTTCGGCTTCGCATGTTATCTATCCATCAGATTTTGACGCT
TTAGCGACATTCTTTACCTGGCACATGCGCATTGCAGAAGGAGTCATACCGCTATTTCTGGTATTTTTTGCTTTGTGTAA
TACAAGAGCGATAATGCAAAGCAGCAACCGCCACTTGCTTTATTCAACGGTTATGTTCATCTATGGCAGCATACTGGGGA
TTTTGAGTATGCATGGTACTGTGACGATACCAGCACATTATCACGGCTGTGTTGTGGGGATGACGGCTGCATTTATGGGG
TTTGTATACACTATACTTCCGAGTTTGGGTTATAGGGAAGTATCTCTCAAGTGGCGAAATGCTCAACTAGGTCTCTACAG
CATAGGGCAAATACTTCACATAACGGGTTTGGAGCTACTAGGTGGTTATGGTGCCTTACGTAAGGTTACTTATTTGCCGG
ACACTGCTTCAAAGATAGCGAAACATTGTTTTTCGTTTGGCGGAGCTTTGGCGATATTAGGGGGTTTTTTGTTTGTATTT
CTTGCACTTTTGTGCATTTATCGCGGACAACAGGGCAAAGGTGCTTCTTTAGCAAGTGTGTAA

Upstream 100 bases:

>100_bases
GCATGTCAGCTAGGCTACTTGTACCATACCCATTTACCGCATAGCTCTGTGTATGGTTGCCATTAACAATGCTAACAAGG
AACTGTGTCGTGGATGGTTG

Downstream 100 bases:

>100_bases
GAAGCTTCAGTATGCATTATGAATGTTTTGTGTAAAACATTCCGTTGTAAAGCCCACCAATTGTCATGCTAGGTAACAAC
GTGAGAGAAGAAGTTGGCAT

Product: putative cytochrome c oxidase, subunit I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MVAVHALGISGILSILIVFLRMPFLKSVIPEPDRIFDLSLVIHVNFSVLVWLCSISSILISMAVQEKTKFFSYTWGLSAV
GTVLIALSAISKDSIPIKSNYIPVIDNSTFFVGLTLFFAGVVLNTLPLLYRRNALTSSPISAGVYGISAMLTAVLICFTS
AHAVTSNTTDRLYFYEQIFWGAGHMLQGVFSQAFLVVLLLEMKNCKLTHPYLLSAVFLLNTASILIASASHVIYPSDFDA
LATFFTWHMRIAEGVIPLFLVFFALCNTRAIMQSSNRHLLYSTVMFIYGSILGILSMHGTVTIPAHYHGCVVGMTAAFMG
FVYTILPSLGYREVSLKWRNAQLGLYSIGQILHITGLELLGGYGALRKVTYLPDTASKIAKHCFSFGGALAILGGFLFVF
LALLCIYRGQQGKGASLASV

Sequences:

>Translated_420_residues
MVAVHALGISGILSILIVFLRMPFLKSVIPEPDRIFDLSLVIHVNFSVLVWLCSISSILISMAVQEKTKFFSYTWGLSAV
GTVLIALSAISKDSIPIKSNYIPVIDNSTFFVGLTLFFAGVVLNTLPLLYRRNALTSSPISAGVYGISAMLTAVLICFTS
AHAVTSNTTDRLYFYEQIFWGAGHMLQGVFSQAFLVVLLLEMKNCKLTHPYLLSAVFLLNTASILIASASHVIYPSDFDA
LATFFTWHMRIAEGVIPLFLVFFALCNTRAIMQSSNRHLLYSTVMFIYGSILGILSMHGTVTIPAHYHGCVVGMTAAFMG
FVYTILPSLGYREVSLKWRNAQLGLYSIGQILHITGLELLGGYGALRKVTYLPDTASKIAKHCFSFGGALAILGGFLFVF
LALLCIYRGQQGKGASLASV
>Mature_420_residues
MVAVHALGISGILSILIVFLRMPFLKSVIPEPDRIFDLSLVIHVNFSVLVWLCSISSILISMAVQEKTKFFSYTWGLSAV
GTVLIALSAISKDSIPIKSNYIPVIDNSTFFVGLTLFFAGVVLNTLPLLYRRNALTSSPISAGVYGISAMLTAVLICFTS
AHAVTSNTTDRLYFYEQIFWGAGHMLQGVFSQAFLVVLLLEMKNCKLTHPYLLSAVFLLNTASILIASASHVIYPSDFDA
LATFFTWHMRIAEGVIPLFLVFFALCNTRAIMQSSNRHLLYSTVMFIYGSILGILSMHGTVTIPAHYHGCVVGMTAAFMG
FVYTILPSLGYREVSLKWRNAQLGLYSIGQILHITGLELLGGYGALRKVTYLPDTASKIAKHCFSFGGALAILGGFLFVF
LALLCIYRGQQGKGASLASV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.aeolicus AQ_155 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: NA

Molecular weight: Translated: 45868; Mature: 45868

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAVHALGISGILSILIVFLRMPFLKSVIPEPDRIFDLSLVIHVNFSVLVWLCSISSILI
CEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHH
SMAVQEKTKFFSYTWGLSAVGTVLIALSAISKDSIPIKSNYIPVIDNSTFFVGLTLFFAG
HHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHH
VVLNTLPLLYRRNALTSSPISAGVYGISAMLTAVLICFTSAHAVTSNTTDRLYFYEQIFW
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHH
GAGHMLQGVFSQAFLVVLLLEMKNCKLTHPYLLSAVFLLNTASILIASASHVIYPSDFDA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHH
LATFFTWHMRIAEGVIPLFLVFFALCNTRAIMQSSNRHLLYSTVMFIYGSILGILSMHGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
VTIPAHYHGCVVGMTAAFMGFVYTILPSLGYREVSLKWRNAQLGLYSIGQILHITGLELL
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
GGYGALRKVTYLPDTASKIAKHCFSFGGALAILGGFLFVFLALLCIYRGQQGKGASLASV
CCCHHHHEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MVAVHALGISGILSILIVFLRMPFLKSVIPEPDRIFDLSLVIHVNFSVLVWLCSISSILI
CEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHH
SMAVQEKTKFFSYTWGLSAVGTVLIALSAISKDSIPIKSNYIPVIDNSTFFVGLTLFFAG
HHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHH
VVLNTLPLLYRRNALTSSPISAGVYGISAMLTAVLICFTSAHAVTSNTTDRLYFYEQIFW
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEECCCCCHHHHHHHHHH
GAGHMLQGVFSQAFLVVLLLEMKNCKLTHPYLLSAVFLLNTASILIASASHVIYPSDFDA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHH
LATFFTWHMRIAEGVIPLFLVFFALCNTRAIMQSSNRHLLYSTVMFIYGSILGILSMHGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
VTIPAHYHGCVVGMTAAFMGFVYTILPSLGYREVSLKWRNAQLGLYSIGQILHITGLELL
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
GGYGALRKVTYLPDTASKIAKHCFSFGGALAILGGFLFVFLALLCIYRGQQGKGASLASV
CCCHHHHEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]