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The map label for this gene is 88606937

Identifier: 88606937

GI number: 88606937

Start: 914918

End: 916249

Strand: Direct

Name: 88606937

Synonym: APH_0861

Alternate gene names: NA

Gene position: 914918-916249 (Clockwise)

Preceding gene: 88607402

Following gene: 88607290

Centisome position: 62.19

GC content: 37.61

Gene sequence:

>1332_bases
ATGACAACAGCCGCTTTAGAAGTAAAAGATGGCATCACAGAATTCTTATCTCAGTGTGATGCAGACTTAGCACCTATACA
AGAAAACAAAACAGAAAATATAAACAACAAACACATTACAAATGATGTGCTTTTGCAACAACTTGAAGACATAAATAGTA
AATTTGACCATTACGCCAATCGACTAGATAAACTAGAAACCGAACGTAATGCGATAAACTTGAATGAAAATCCCGAAACA
CCAGAATACAAATCTCTGCGCCAATATATAACTCACGGCCATCAAGCATTAGAATGCAAAAACATATTTGTAACTTCCGC
CGCTGTTCCTGATACTAACTTTTCGTACTTAATACCCAAAAAAATCCACTTGCATTTCGATAAGTTATTGTCTCAAAACT
CAATAATGAGAAAATTGTGCTCAATTGAGAAAATATCGAGTGATAGCCTAGAGTACCTCATCTCAAACAACCAAGAAACT
TTCGTAGGATGGAGTGGCGATCACAACACTATAGTTAGTAAAAGTCTCACACCCAAATTATCCCATATTAATATTCGTTT
ATTTGAACTCTATGCACAACCACAACTGGCAAAAAATCTTTTAGAAGATACGTGTATAGACCTAGAACGCTGGCTTATGA
ATAACTTAGTAGATGCTTTTAGTCGGAAAGAGAATCAGGCATTTATCTCAGGCAGCGGAGCATCACAGCCGACAGGCATA
CTATCTTATGACGAGGGTACTGGCCCTGGCCAAATTGAGAGAGTCAAAGTAGAAACACTGAATACAGACGCGATTATAAA
ATTGTTCTATTCATTAAACGAGAACTTTTCATCGCGAGCTGCTTTTCTCATGAATCGCAGCATATTACAAGAAATTCGAT
CACTCAAATCCAACACAGGACAGTATTTATTGCAAGTAGGAAATTCAGGAGATGAAATGCTACTAGGTATTCCAGTATAT
CAAACTTCAGATATGCCTATGTATTCTGATGGGAGTAATAGTATCATAGCAATAGCCGACTTCAAAAGTGCCTACAAGAT
AGTGGAAAATAAAGATATGCGTATACTGCGCGACCCGTACACTGAGAAATCTTTTGTAAAATTTTATACGACAAAACGTA
TCGGAGGAGCTGCAGTAAATTGCAATGCCATAAAATTACTCACCGTCACAAGGCCCACTATTGTACCTAAAATTAATAAA
TCTTCCGCGGCTAAATCTCCTGTAGCTGAACTTCCCATAGCTCAATCTCCTGTAGCTGTACTTCCCGTAGCTAAATCTCC
TGTAGCTGAACCTCCTGTTTCTGAAGTCTTTAATCCTGAAACTCTCAAATAA

Upstream 100 bases:

>100_bases
ACCCATAGTAAGAAACCTGTGAATAATAGTCTGGGTAAAAGAGCTTTTCGCTTTTTTTCCACTATTACTACCCACATCAT
AATCTTTATCTGGAAATTAT

Downstream 100 bases:

>100_bases
TCTACAAAGTATCCTGATCAGAAAACTGTAAGACTCATACCTCCTTCTCCTTACATTTACGGAGACGTATGCTGGGATAG
TAGAGTATTGACACATCTTT

Product: HK97 family phage major capsid protein

Products: NA

Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; Capsid Protein; HK97 Family Capsid Protein; Capsid Protein Of Prophage; Phage Capsid Family; Phage Prohead Protease; Prophage; Phage Capsid Protein Gp; Phage Prohead Protease And Phage Capsid Protein; Phage Phi-C31 Capsid; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Capsid C; Phage Capsid Family Protein

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MTTAALEVKDGITEFLSQCDADLAPIQENKTENINNKHITNDVLLQQLEDINSKFDHYANRLDKLETERNAINLNENPET
PEYKSLRQYITHGHQALECKNIFVTSAAVPDTNFSYLIPKKIHLHFDKLLSQNSIMRKLCSIEKISSDSLEYLISNNQET
FVGWSGDHNTIVSKSLTPKLSHINIRLFELYAQPQLAKNLLEDTCIDLERWLMNNLVDAFSRKENQAFISGSGASQPTGI
LSYDEGTGPGQIERVKVETLNTDAIIKLFYSLNENFSSRAAFLMNRSILQEIRSLKSNTGQYLLQVGNSGDEMLLGIPVY
QTSDMPMYSDGSNSIIAIADFKSAYKIVENKDMRILRDPYTEKSFVKFYTTKRIGGAAVNCNAIKLLTVTRPTIVPKINK
SSAAKSPVAELPIAQSPVAVLPVAKSPVAEPPVSEVFNPETLK

Sequences:

>Translated_443_residues
MTTAALEVKDGITEFLSQCDADLAPIQENKTENINNKHITNDVLLQQLEDINSKFDHYANRLDKLETERNAINLNENPET
PEYKSLRQYITHGHQALECKNIFVTSAAVPDTNFSYLIPKKIHLHFDKLLSQNSIMRKLCSIEKISSDSLEYLISNNQET
FVGWSGDHNTIVSKSLTPKLSHINIRLFELYAQPQLAKNLLEDTCIDLERWLMNNLVDAFSRKENQAFISGSGASQPTGI
LSYDEGTGPGQIERVKVETLNTDAIIKLFYSLNENFSSRAAFLMNRSILQEIRSLKSNTGQYLLQVGNSGDEMLLGIPVY
QTSDMPMYSDGSNSIIAIADFKSAYKIVENKDMRILRDPYTEKSFVKFYTTKRIGGAAVNCNAIKLLTVTRPTIVPKINK
SSAAKSPVAELPIAQSPVAVLPVAKSPVAEPPVSEVFNPETLK
>Mature_442_residues
TTAALEVKDGITEFLSQCDADLAPIQENKTENINNKHITNDVLLQQLEDINSKFDHYANRLDKLETERNAINLNENPETP
EYKSLRQYITHGHQALECKNIFVTSAAVPDTNFSYLIPKKIHLHFDKLLSQNSIMRKLCSIEKISSDSLEYLISNNQETF
VGWSGDHNTIVSKSLTPKLSHINIRLFELYAQPQLAKNLLEDTCIDLERWLMNNLVDAFSRKENQAFISGSGASQPTGIL
SYDEGTGPGQIERVKVETLNTDAIIKLFYSLNENFSSRAAFLMNRSILQEIRSLKSNTGQYLLQVGNSGDEMLLGIPVYQ
TSDMPMYSDGSNSIIAIADFKSAYKIVENKDMRILRDPYTEKSFVKFYTTKRIGGAAVNCNAIKLLTVTRPTIVPKINKS
SAAKSPVAELPIAQSPVAVLPVAKSPVAEPPVSEVFNPETLK

Specific function: Unknown

COG id: COG4653

COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49498; Mature: 49367

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAALEVKDGITEFLSQCDADLAPIQENKTENINNKHITNDVLLQQLEDINSKFDHYAN
CCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RLDKLETERNAINLNENPETPEYKSLRQYITHGHQALECKNIFVTSAAVPDTNFSYLIPK
HHHHHHHHCCEECCCCCCCCCCHHHHHHHHHCCCCEEEECEEEEEECCCCCCCCEEECCH
KIHLHFDKLLSQNSIMRKLCSIEKISSDSLEYLISNNQETFVGWSGDHNTIVSKSLTPKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEECCCCCEEEECCCCCCH
SHINIRLFELYAQPQLAKNLLEDTCIDLERWLMNNLVDAFSRKENQAFISGSGASQPTGI
HHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCE
LSYDEGTGPGQIERVKVETLNTDAIIKLFYSLNENFSSRAAFLMNRSILQEIRSLKSNTG
EEECCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
QYLLQVGNSGDEMLLGIPVYQTSDMPMYSDGSNSIIAIADFKSAYKIVENKDMRILRDPY
EEEEEECCCCCCEEEEEEEEECCCCCEEECCCCCEEEEECCHHHHHHHCCCCCEEEECCC
TEKSFVKFYTTKRIGGAAVNCNAIKLLTVTRPTIVPKINKSSAAKSPVAELPIAQSPVAV
CCCHHEEEEEHHCCCCEEECCCEEEEEEEECCCEEECCCCCCCCCCCHHHCCCCCCCEEE
LPVAKSPVAEPPVSEVFNPETLK
EECCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
TTAALEVKDGITEFLSQCDADLAPIQENKTENINNKHITNDVLLQQLEDINSKFDHYAN
CCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RLDKLETERNAINLNENPETPEYKSLRQYITHGHQALECKNIFVTSAAVPDTNFSYLIPK
HHHHHHHHCCEECCCCCCCCCCHHHHHHHHHCCCCEEEECEEEEEECCCCCCCCEEECCH
KIHLHFDKLLSQNSIMRKLCSIEKISSDSLEYLISNNQETFVGWSGDHNTIVSKSLTPKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEECCCCCEEEECCCCCCH
SHINIRLFELYAQPQLAKNLLEDTCIDLERWLMNNLVDAFSRKENQAFISGSGASQPTGI
HHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCE
LSYDEGTGPGQIERVKVETLNTDAIIKLFYSLNENFSSRAAFLMNRSILQEIRSLKSNTG
EEECCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
QYLLQVGNSGDEMLLGIPVYQTSDMPMYSDGSNSIIAIADFKSAYKIVENKDMRILRDPY
EEEEEECCCCCCEEEEEEEEECCCCCEEECCCCCEEEEECCHHHHHHHCCCCCEEEECCC
TEKSFVKFYTTKRIGGAAVNCNAIKLLTVTRPTIVPKINKSSAAKSPVAELPIAQSPVAV
CCCHHEEEEEHHCCCCEEECCCEEEEEEEECCCEEECCCCCCCCCCCHHHCCCCCCCEEE
LPVAKSPVAEPPVSEVFNPETLK
EECCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA