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The map label for this gene is p44-14 [H]

Identifier: 88606886

GI number: 88606886

Start: 1283955

End: 1285256

Strand: Reverse

Name: p44-14 [H]

Synonym: APH_1215

Alternate gene names: 88606886

Gene position: 1285256-1283955 (Counterclockwise)

Preceding gene: 88607736

Following gene: 88607085

Centisome position: 87.36

GC content: 44.24

Gene sequence:

>1302_bases
ATGATGTCGATGGCTATAGTCATGGCTGGGAGTGATGTTAGGGCTCATGATGACGTTAGCGCTTTGGATACTGGTGGTGC
GGGATATTTCTATGTTGGTTTGGATTACAGTCCAGCGTTTAGCAAGATAAGAGATTTTAGTATAAGGGAGAGTAACGGAG
AGACTAAGGCAGTATATCCATACTTAAAGGATGGAAAGAGTGTAAAGCTTGAGTCACACAAGTTTGACTGGAACACTCCT
GATCCTCGGATTGGGTTTAAGGACAACATGCTTGTAGCTATGGAAGGTAGTGTTGGTTATGGTATTGGTGGTGCCAGGGT
TGAGCTTGAGATTGGTTACGAGCGCTTCAAGACCAAGGGTATTAGAGATAGTGGTAGTAAGGAAGATGAAGCTGATACAG
TATATCTACTAGCTAAGGAGTTAGCTTATGATGTTGTTACTGGACAAACTGATAAACTTACTGCTGCTCTTGCTAAGACC
TCTGGGAAGGACATCGTTCAGTTTGCTAAGACTCTTGGAATTTCTCATTCCGAGATTGATAAGAAGGTTTGTAGTGGGAG
CCATGCGAAGGGGAATAGTGAGACAACAAAAAATAATACTGTAGCTAGCTATACTGAAAAGCCAACAGCGGCAACAGCAA
CGGCACAATGTAGTGGTTTTCCTGATGAGGCTGCAGGAAACAAAGCAGGGGGATTGAATAGGTTTGTAAGCGAAACGAAA
GTGGAAGAAGGTAAAAACTGGCCTACGGGCAAGATACACAGTGGGAGCAGCACTAACAACGTGGATGGCACACACAATGG
AAACGCCAAAGCCGTAGCCACAGACCTAGTAAATCTTAATCGTGACGAAAAAACCATAGTAGCAGGGTTATTAGCTAAAA
CTATTGAAGGGGGTGAGGTTGTAGAAATTAGGGCCGTTTCTTCTACTTCTGTGATGGTCAATGCTTGCTATGATCTTCTT
AGTGAAGGTCTAGGCGTTGTTCCTTATGCTTGTGTCGGTTTAGGTGGTAACTTCGTGGGCGTTGTTGATGGGCATATCAC
TCCTAAGCTTGCTTATAGATTAAAGGCTGGCTTGAGTTATCAGCTCTCTCCTGAAATCTCGGCTTTTGCTGGGGGTTTCT
ACCATCGTGTTGTGGGAGATGGTGTCTATGATGATCTGCCGGCTCAACGTCTTGTAGATGATACTAGTCCGGCGGGCCGT
ACTAAGGATACTGCTATTGCTAACTTCTCCATGGCCTATGTTGGTGCATCATTTCAGCCATATTACGCAGTTCTTCTAGT
AGAACTGTATGAGTATCGATAA

Upstream 100 bases:

>100_bases
GATATTAGCAAACTTATAAGTGGAAAGCAGCAACTTGCATCAAGGGGGTGTATTATCAGCTCATGGTGTTGTTCTTTAAA
ATATCCGAGAACATTGTAAT

Downstream 100 bases:

>100_bases
AAAGATATACGACGCAGCATGCTCTGAAAAAGTGACAGGGTGAACAGCAGTGCAGCATACATTAGCCTGTCTGTATCAGT
GTGCAATCTGTTACAAAACT

Product: P44-14 outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MMSMAIVMAGSDVRAHDDVSALDTGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSVKLESHKFDWNTP
DPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDKLTAALAKT
SGKDIVQFAKTLGISHSEIDKKVCSGSHAKGNSETTKNNTVASYTEKPTAATATAQCSGFPDEAAGNKAGGLNRFVSETK
VEEGKNWPTGKIHSGSSTNNVDGTHNGNAKAVATDLVNLNRDEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLL
SEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPAQRLVDDTSPAGR
TKDTAIANFSMAYVGASFQPYYAVLLVELYEYR

Sequences:

>Translated_433_residues
MMSMAIVMAGSDVRAHDDVSALDTGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSVKLESHKFDWNTP
DPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDKLTAALAKT
SGKDIVQFAKTLGISHSEIDKKVCSGSHAKGNSETTKNNTVASYTEKPTAATATAQCSGFPDEAAGNKAGGLNRFVSETK
VEEGKNWPTGKIHSGSSTNNVDGTHNGNAKAVATDLVNLNRDEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLL
SEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPAQRLVDDTSPAGR
TKDTAIANFSMAYVGASFQPYYAVLLVELYEYR
>Mature_433_residues
MMSMAIVMAGSDVRAHDDVSALDTGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSVKLESHKFDWNTP
DPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDKLTAALAKT
SGKDIVQFAKTLGISHSEIDKKVCSGSHAKGNSETTKNNTVASYTEKPTAATATAQCSGFPDEAAGNKAGGLNRFVSETK
VEEGKNWPTGKIHSGSSTNNVDGTHNGNAKAVATDLVNLNRDEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLL
SEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPAQRLVDDTSPAGR
TKDTAIANFSMAYVGASFQPYYAVLLVELYEYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 46162; Mature: 46162

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSMAIVMAGSDVRAHDDVSALDTGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYP
CCEEEEEEECCCCCCCCCCHHHCCCCCEEEEEEECCCHHHHHHHCCEEECCCCCEEEEEE
YLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKG
EECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECHHHHHCCC
IRDSGSKEDEADTVYLLAKELAYDVVTGQTDKLTAALAKTSGKDIVQFAKTLGISHSEID
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHH
KKVCSGSHAKGNSETTKNNTVASYTEKPTAATATAQCSGFPDEAAGNKAGGLNRFVSETK
HHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEHCCCCCCCCCCCCCCCCHHHHHHHHH
VEEGKNWPTGKIHSGSSTNNVDGTHNGNAKAVATDLVNLNRDEKTIVAGLLAKTIEGGEV
HHCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHCCCCCE
VEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSY
EEEEEECCCHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEECCCCCHHHHHHHHCCCCE
QLSPEISAFAGGFYHRVVGDGVYDDLPAQRLVDDTSPAGRTKDTAIANFSMAYVGASFQP
EECCCHHHHHCCHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCH
YYAVLLVELYEYR
HHHHHHHHHHHCC
>Mature Secondary Structure
MMSMAIVMAGSDVRAHDDVSALDTGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYP
CCEEEEEEECCCCCCCCCCHHHCCCCCEEEEEEECCCHHHHHHHCCEEECCCCCEEEEEE
YLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKG
EECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECHHHHHCCC
IRDSGSKEDEADTVYLLAKELAYDVVTGQTDKLTAALAKTSGKDIVQFAKTLGISHSEID
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHH
KKVCSGSHAKGNSETTKNNTVASYTEKPTAATATAQCSGFPDEAAGNKAGGLNRFVSETK
HHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEHCCCCCCCCCCCCCCCCHHHHHHHHH
VEEGKNWPTGKIHSGSSTNNVDGTHNGNAKAVATDLVNLNRDEKTIVAGLLAKTIEGGEV
HHCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHCCCCCE
VEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSY
EEEEEECCCHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEECCCCCHHHHHHHHCCCCE
QLSPEISAFAGGFYHRVVGDGVYDDLPAQRLVDDTSPAGRTKDTAIANFSMAYVGASFQP
EECCCHHHHHCCHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCH
YYAVLLVELYEYR
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]