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The map label for this gene is comM [H]

Identifier: 88606720

GI number: 88606720

Start: 798820

End: 800373

Strand: Reverse

Name: comM [H]

Synonym: APH_0754

Alternate gene names: 88606720

Gene position: 800373-798820 (Counterclockwise)

Preceding gene: 88607306

Following gene: 88606945

Centisome position: 54.4

GC content: 39.9

Gene sequence:

>1554_bases
ATGCTGGCAGATGTAAATACAGTGGCATTCGTTGGTGTGTGTACTGTAGATGTTATTGTGCAAGTTCATATAGCAAATGG
TATACCATCTTTTCATATCGTGGGTATGCCCGATAAGGTTGTTGCAGAGTCACGTGAGAGAATAAGAGCGGCATTAACAT
CTATCAAAGCTCCTCTACCGCTGAAACGTATAACGGTGAACTTATCTCCAGCGAGTCTATTTAAGGAAGGCAGCCATTAT
GATCTTCCCATAGTTATGGGCATACTTTCTGTTATGAAGATTATCAAAGAATCAGAGAAGCTTTCTTCTTACATAATGCT
AGGTGAACTTTCATTGGATGGCAGCATTACAGCGGTAAAAGGAGTTCTTGCTGCGGCAGTATGTGCTAAAAATGGATCGA
AAGGGATAATATGTCCGTATGGCAATGCCAGAGAAGCGTCTCTCATTGCTGGTTTAGAAGTGCTGGGGCCGAGGCATTTA
TCTAATCTCGTGCATTACTTTAGTAATAATCATTATTCTGCGAATACCGACTCTGCAGAATTTTATAATACCTCTGATAG
TAGGGGAAAAGAATTTCATATTAAAAGTAAAACTTTAACAATAGATATGGGAGATGTATTAGGGCAAGAAATCGCAAAAC
GCGCAGCGCTAATAGCAGCGGCGGGAGAGCATAATTTGCTTATGATTGGGCCTCCTGGTACTGGAAAGTCTATGATTGCA
AAAAGAATTCCCGGTATTTTACCCGATTTAACTCCCGAGGAGATAATTGCAATTAATGTTATTTCCAGCATTACTCAAAG
TGGGATTGAGTATCTTATCACTTCGAGGCCTTTTAGAGAGCCGCACAGTTCTGCGTCTATGCCATCTATAGTAGGAGGAG
GGATGCGCGCGCACCCTGGTGAAATTACTTTGGCTCATAATGGTATTTTGTTTTTAGATGAATTGCCTGAGTTTTCTAAG
AGTGTTTTAGAAGCGCTAAGGCAGCCTTTAGAAGATAAAAGTGTTGTAATAGCACGAGCGAATTCACATATTACCTATCC
AGCAAATTTTCAACTTGTTGCGGCTATGAATCCTTGTAAATGTGGGTATCTAAATGATCCAAATAGGAGATGTTCTAGGG
CGCCAAAATGCGCAATAGAATACCAAAGGAGAATTTCTGGTCCAATATTGAGTAGGATAGATATTAAAGTGGAGATGGGG
AATGTAAGCGTGTTTTCGAAAATAACTGGAAGCAAGGAAGAAAATTCATCAGAAATGAAAAGAAGGGTCATGAGTGCAAG
GCTTTTTCAAGAGCGTAGATATGGAGATGCTACGAAGAGAAATGCTTTTTTATCAGCGCATGACGTGGAGTCTTTTGTGA
TACCGTATATGTGTAGCAATGCGAGGAGATTGCTTGAACAAGTTTTTCAAAGGAATCAACTCTCTAATAGAGATTCTGCT
AAGATCTTGAAAGTAGCAAGGACTATTGCGGATTTGTCTTGTAGTGAAGAGATCTTAGAGGAACATGTTGCTGAGGCCAT
AAGCCTGTTTGGTCATAATGTATTTTGTTTATAA

Upstream 100 bases:

>100_bases
ACTAAAAGTATCATGTTTTTATAATTAATAATTTAATATTTTTTACTAGGGATTTTGGTTATTTCTTGCTAAGAACTACT
GCTTTAATGGCACATTTAAA

Downstream 100 bases:

>100_bases
ACTTTGTTGCACTCTTGCCAGGCTGTATATTTTCTGAATCGCAGTTCTTTGCTCTCTTTGATAGTGCAAGTTCTTTTTGC
TTTAGGGATATCTTAGCAGC

Product: magnesium chelatase subunit D/I family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MLADVNTVAFVGVCTVDVIVQVHIANGIPSFHIVGMPDKVVAESRERIRAALTSIKAPLPLKRITVNLSPASLFKEGSHY
DLPIVMGILSVMKIIKESEKLSSYIMLGELSLDGSITAVKGVLAAAVCAKNGSKGIICPYGNAREASLIAGLEVLGPRHL
SNLVHYFSNNHYSANTDSAEFYNTSDSRGKEFHIKSKTLTIDMGDVLGQEIAKRAALIAAAGEHNLLMIGPPGTGKSMIA
KRIPGILPDLTPEEIIAINVISSITQSGIEYLITSRPFREPHSSASMPSIVGGGMRAHPGEITLAHNGILFLDELPEFSK
SVLEALRQPLEDKSVVIARANSHITYPANFQLVAAMNPCKCGYLNDPNRRCSRAPKCAIEYQRRISGPILSRIDIKVEMG
NVSVFSKITGSKEENSSEMKRRVMSARLFQERRYGDATKRNAFLSAHDVESFVIPYMCSNARRLLEQVFQRNQLSNRDSA
KILKVARTIADLSCSEEILEEHVAEAISLFGHNVFCL

Sequences:

>Translated_517_residues
MLADVNTVAFVGVCTVDVIVQVHIANGIPSFHIVGMPDKVVAESRERIRAALTSIKAPLPLKRITVNLSPASLFKEGSHY
DLPIVMGILSVMKIIKESEKLSSYIMLGELSLDGSITAVKGVLAAAVCAKNGSKGIICPYGNAREASLIAGLEVLGPRHL
SNLVHYFSNNHYSANTDSAEFYNTSDSRGKEFHIKSKTLTIDMGDVLGQEIAKRAALIAAAGEHNLLMIGPPGTGKSMIA
KRIPGILPDLTPEEIIAINVISSITQSGIEYLITSRPFREPHSSASMPSIVGGGMRAHPGEITLAHNGILFLDELPEFSK
SVLEALRQPLEDKSVVIARANSHITYPANFQLVAAMNPCKCGYLNDPNRRCSRAPKCAIEYQRRISGPILSRIDIKVEMG
NVSVFSKITGSKEENSSEMKRRVMSARLFQERRYGDATKRNAFLSAHDVESFVIPYMCSNARRLLEQVFQRNQLSNRDSA
KILKVARTIADLSCSEEILEEHVAEAISLFGHNVFCL
>Mature_517_residues
MLADVNTVAFVGVCTVDVIVQVHIANGIPSFHIVGMPDKVVAESRERIRAALTSIKAPLPLKRITVNLSPASLFKEGSHY
DLPIVMGILSVMKIIKESEKLSSYIMLGELSLDGSITAVKGVLAAAVCAKNGSKGIICPYGNAREASLIAGLEVLGPRHL
SNLVHYFSNNHYSANTDSAEFYNTSDSRGKEFHIKSKTLTIDMGDVLGQEIAKRAALIAAAGEHNLLMIGPPGTGKSMIA
KRIPGILPDLTPEEIIAINVISSITQSGIEYLITSRPFREPHSSASMPSIVGGGMRAHPGEITLAHNGILFLDELPEFSK
SVLEALRQPLEDKSVVIARANSHITYPANFQLVAAMNPCKCGYLNDPNRRCSRAPKCAIEYQRRISGPILSRIDIKVEMG
NVSVFSKITGSKEENSSEMKRRVMSARLFQERRYGDATKRNAFLSAHDVESFVIPYMCSNARRLLEQVFQRNQLSNRDSA
KILKVARTIADLSCSEEILEEHVAEAISLFGHNVFCL

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=510, Percent_Identity=40.3921568627451, Blast_Score=357, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 56438; Mature: 56438

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS50051 MCM_2 ; PS00676 SIGMA54_INTERACT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLADVNTVAFVGVCTVDVIVQVHIANGIPSFHIVGMPDKVVAESRERIRAALTSIKAPLP
CCCCCCHHHHHHHHHEEHEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCC
LKRITVNLSPASLFKEGSHYDLPIVMGILSVMKIIKESEKLSSYIMLGELSLDGSITAVK
EEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHH
GVLAAAVCAKNGSKGIICPYGNAREASLIAGLEVLGPRHLSNLVHYFSNNHYSANTDSAE
HHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCC
FYNTSDSRGKEFHIKSKTLTIDMGDVLGQEIAKRAALIAAAGEHNLLMIGPPGTGKSMIA
EECCCCCCCCEEEEECEEEEEEHHHHHHHHHHHHHHHEEECCCCCEEEECCCCCCHHHHH
KRIPGILPDLTPEEIIAINVISSITQSGIEYLITSRPFREPHSSASMPSIVGGGMRAHPG
HHCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCC
EITLAHNGILFLDELPEFSKSVLEALRQPLEDKSVVIARANSHITYPANFQLVAAMNPCK
EEEEEECCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCEEEEEECCCCC
CGYLNDPNRRCSRAPKCAIEYQRRISGPILSRIDIKVEMGNVSVFSKITGSKEENSSEMK
CCCCCCCHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEECCEEEEHHHCCCCCCCHHHHH
RRVMSARLFQERRYGDATKRNAFLSAHDVESFVIPYMCSNARRLLEQVFQRNQLSNRDSA
HHHHHHHHHHHHHCCCCHHHCCEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
KILKVARTIADLSCSEEILEEHVAEAISLFGHNVFCL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEC
>Mature Secondary Structure
MLADVNTVAFVGVCTVDVIVQVHIANGIPSFHIVGMPDKVVAESRERIRAALTSIKAPLP
CCCCCCHHHHHHHHHEEHEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCC
LKRITVNLSPASLFKEGSHYDLPIVMGILSVMKIIKESEKLSSYIMLGELSLDGSITAVK
EEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHH
GVLAAAVCAKNGSKGIICPYGNAREASLIAGLEVLGPRHLSNLVHYFSNNHYSANTDSAE
HHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCC
FYNTSDSRGKEFHIKSKTLTIDMGDVLGQEIAKRAALIAAAGEHNLLMIGPPGTGKSMIA
EECCCCCCCCEEEEECEEEEEEHHHHHHHHHHHHHHHEEECCCCCEEEECCCCCCHHHHH
KRIPGILPDLTPEEIIAINVISSITQSGIEYLITSRPFREPHSSASMPSIVGGGMRAHPG
HHCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCC
EITLAHNGILFLDELPEFSKSVLEALRQPLEDKSVVIARANSHITYPANFQLVAAMNPCK
EEEEEECCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCEEEEEECCCCC
CGYLNDPNRRCSRAPKCAIEYQRRISGPILSRIDIKVEMGNVSVFSKITGSKEENSSEMK
CCCCCCCHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEECCEEEEHHHCCCCCCCHHHHH
RRVMSARLFQERRYGDATKRNAFLSAHDVESFVIPYMCSNARRLLEQVFQRNQLSNRDSA
HHHHHHHHHHHHHCCCCHHHCCEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
KILKVARTIADLSCSEEILEEHVAEAISLFGHNVFCL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]