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The map label for this gene is 88195734

Identifier: 88195734

GI number: 88195734

Start: 1950046

End: 1950486

Strand: Reverse

Name: 88195734

Synonym: SAOUHSC_02050

Alternate gene names: NA

Gene position: 1950486-1950046 (Counterclockwise)

Preceding gene: 88195735

Following gene: 88195733

Centisome position: 69.13

GC content: 33.33

Gene sequence:

>441_bases
ATGAACGAAAAACAAAAGAGATTCGCAGATGAATATATAATGAATGGATGTAATGGTAAAAAAGCAGCAATTACAGCAGG
TTATAGTAAGAAAACAGCAGAGTCTTTAGCAAGTCGATTGTTAAGAAATGTTAATGTTTCGGAATATATTAAAGAACGAT
TAGAACAGATACAAGAAGAGCGTTTAATGAGTATTACAGAAGCTTTAGCGTTATCTGCTTCTATTGCTAGAGGAGAACCT
CAAGAGGCTTACAGTAAGAAATATGACCATTTAAACGATGAAGTGGAAAAAGAGGTTACTTACACAATCACACCAACTTT
TGAAGAGCGTCAGAGATCTATTGACCACATACTAAAAGTACATGGTGCGTATATCGATAAAAAAGAAATTACTCAGAAGA
ATATTGAGATTAATATTGGTGAGTACGATGACGAAAGTTAA

Upstream 100 bases:

>100_bases
ATCGCAATTAGGAATAAAGGATCTATGTGGGTTGGCTGATTATAGCCAATCCTTTTTTAATTTTAAAAAGCGTATAGCGC
GAGAGTTGGTGGTAAATGAA

Downstream 100 bases:

>100_bases
ATTAAACTTTAACAAACCGTCTAATGTTTTCAATAGAAACATATTCGAAATACTAACCAATTACGATAACTTCACTGAAG
TACATTACGGTGGAGGTTCG

Product: terminase small subunit

Products: NA

Alternate protein names: Phage Terminase Small Subunit; Small Terminase; Terminase Subunit; Prophage Lp2 Protein

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNEKQKRFADEYIMNGCNGKKAAITAGYSKKTAESLASRLLRNVNVSEYIKERLEQIQEERLMSITEALALSASIARGEP
QEAYSKKYDHLNDEVEKEVTYTITPTFEERQRSIDHILKVHGAYIDKKEITQKNIEINIGEYDDES

Sequences:

>Translated_146_residues
MNEKQKRFADEYIMNGCNGKKAAITAGYSKKTAESLASRLLRNVNVSEYIKERLEQIQEERLMSITEALALSASIARGEP
QEAYSKKYDHLNDEVEKEVTYTITPTFEERQRSIDHILKVHGAYIDKKEITQKNIEINIGEYDDES
>Mature_146_residues
MNEKQKRFADEYIMNGCNGKKAAITAGYSKKTAESLASRLLRNVNVSEYIKERLEQIQEERLMSITEALALSASIARGEP
QEAYSKKYDHLNDEVEKEVTYTITPTFEERQRSIDHILKVHGAYIDKKEITQKNIEINIGEYDDES

Specific function: Unknown

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16807; Mature: 16807

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKQKRFADEYIMNGCNGKKAAITAGYSKKTAESLASRLLRNVNVSEYIKERLEQIQEE
CCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RLMSITEALALSASIARGEPQEAYSKKYDHLNDEVEKEVTYTITPTFEERQRSIDHILKV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCEEEEECCCHHHHHHHHHHHHHH
HGAYIDKKEITQKNIEINIGEYDDES
HHHHCCHHHHHHCCCEEECCCCCCCC
>Mature Secondary Structure
MNEKQKRFADEYIMNGCNGKKAAITAGYSKKTAESLASRLLRNVNVSEYIKERLEQIQEE
CCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RLMSITEALALSASIARGEPQEAYSKKYDHLNDEVEKEVTYTITPTFEERQRSIDHILKV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCEEEEECCCHHHHHHHHHHHHHH
HGAYIDKKEITQKNIEINIGEYDDES
HHHHCCHHHHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA