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The map label for this gene is 88195735

Identifier: 88195735

GI number: 88195735

Start: 1950673

End: 1951095

Strand: Reverse

Name: 88195735

Synonym: SAOUHSC_02051

Alternate gene names: NA

Gene position: 1951095-1950673 (Counterclockwise)

Preceding gene: 88195736

Following gene: 88195734

Centisome position: 69.15

GC content: 32.86

Gene sequence:

>423_bases
ATGACTAAAAAGAAATACGGATTAAAATTATCAACAGTTCGAAAGTTAGAAGATGAGTTGTGTGATTATCCTAATTATCA
TAAACAACTTGAAGATTTAAGAAGTGAAATAATGACACCGTGGATTCCAACAGATACAAATATAGGCGGGGAGTTTGTAC
CGTCTAATACATCGAAAACAGAAATGGCAGTAACTAATTATCTTTGTAGTATACGAAGAGGTAAAATCCTTGAGTTTAAG
AGCGCTATTGAACGTATAATCAACACATCAAGCAGGAAAGAACGCGAATTCATTCAAGAGTATTATTTTAATAAAAAGGA
ATTAGTGAAAGTTTGTGTTGACATACACATTTCTGATAGAACTGCTCATAGAATCAAAAGAAAAATCATATCTAGATTGG
CGGAAGAGTTAGGGGAAGACTGA

Upstream 100 bases:

>100_bases
AGTTAAAAGGTGATGTAAAAGTTAAAGAGCGAGAGATAGAGATATTAAGAAGTAGATTGAGACACTTTGAAGATTAAACA
TATTTGTACGGAGGGTATTC

Downstream 100 bases:

>100_bases
AATTGGCAGTAAAGTGGCAGTTTTTGATACCTTAAATGAGATATTATGATAGTGTAGGATATTGACTATCGTACTGCGTT
TCCCTTATCGCAATTAGGAA

Product: int gene activator RinA

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTKKKYGLKLSTVRKLEDELCDYPNYHKQLEDLRSEIMTPWIPTDTNIGGEFVPSNTSKTEMAVTNYLCSIRRGKILEFK
SAIERIINTSSRKEREFIQEYYFNKKELVKVCVDIHISDRTAHRIKRKIISRLAEELGED

Sequences:

>Translated_140_residues
MTKKKYGLKLSTVRKLEDELCDYPNYHKQLEDLRSEIMTPWIPTDTNIGGEFVPSNTSKTEMAVTNYLCSIRRGKILEFK
SAIERIINTSSRKEREFIQEYYFNKKELVKVCVDIHISDRTAHRIKRKIISRLAEELGED
>Mature_139_residues
TKKKYGLKLSTVRKLEDELCDYPNYHKQLEDLRSEIMTPWIPTDTNIGGEFVPSNTSKTEMAVTNYLCSIRRGKILEFKS
AIERIINTSSRKEREFIQEYYFNKKELVKVCVDIHISDRTAHRIKRKIISRLAEELGED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16474; Mature: 16343

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKKYGLKLSTVRKLEDELCDYPNYHKQLEDLRSEIMTPWIPTDTNIGGEFVPSNTSKT
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
EMAVTNYLCSIRRGKILEFKSAIERIINTSSRKEREFIQEYYFNKKELVKVCVDIHISDR
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
TAHRIKRKIISRLAEELGED
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKKKYGLKLSTVRKLEDELCDYPNYHKQLEDLRSEIMTPWIPTDTNIGGEFVPSNTSKT
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
EMAVTNYLCSIRRGKILEFKSAIERIINTSSRKEREFIQEYYFNKKELVKVCVDIHISDR
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
TAHRIKRKIISRLAEELGED
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA