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The map label for this gene is 88195356

Identifier: 88195356

GI number: 88195356

Start: 1562458

End: 1562910

Strand: Reverse

Name: 88195356

Synonym: SAOUHSC_01648

Alternate gene names: NA

Gene position: 1562910-1562458 (Counterclockwise)

Preceding gene: 88195357

Following gene: 88195355

Centisome position: 55.4

GC content: 26.93

Gene sequence:

>453_bases
GTGAATCGTAATATTTTTTGGATTTTACTAATTGGTATGCTTGTTATATTTATTGCACTTCAAATTAGAATTTTTACAAT
TAAAGAAGATAATATTTATAATAAATTGATCAAAGATGATATGACTAGTGGTAATTATGATAATGCTCAAAATATTGCGA
AGCAGACAATAAATAAAAATTATGCCGATGATCAAACATATTATTTAAGTGGTATGATTATGGCTACTATCAATTCTAAG
TCCGAAGGTATGACAGAATGGGAGCGAGGACTTAGAATGTTTCCTAAATCAGGTTTATTAAATTTTGAGTTAGCGATAGC
AAATCGTTCATTAAATGATGATGAAAAAGCATTAAAATATGTGCGTAAAGCATTAAATGCAGACCCTAAAAATACAGATT
ATATTAACTTAGAAAAAGAGTTGACTAAATCAAATGAGTCGAAAAATAAATAA

Upstream 100 bases:

>100_bases
AGTTGGTGTTTCTCTGTTTATGTCAAATATAAATATTGTGGCGCATATTGGAGGATTCATTGGTGGTTTATTAATAACTT
TAATTGGCTATTACTATTAA

Downstream 100 bases:

>100_bases
CTTTTATGATGTACAACAGTTATTGAAAAGTTACGGATTTCTAATATATTTTAAAAATCCAGAAGATATGTACGAAATGA
TTCAACAGGAGATTTCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane Peptidase; Rhomboid Family Peptidase

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MNRNIFWILLIGMLVIFIALQIRIFTIKEDNIYNKLIKDDMTSGNYDNAQNIAKQTINKNYADDQTYYLSGMIMATINSK
SEGMTEWERGLRMFPKSGLLNFELAIANRSLNDDEKALKYVRKALNADPKNTDYINLEKELTKSNESKNK

Sequences:

>Translated_150_residues
MNRNIFWILLIGMLVIFIALQIRIFTIKEDNIYNKLIKDDMTSGNYDNAQNIAKQTINKNYADDQTYYLSGMIMATINSK
SEGMTEWERGLRMFPKSGLLNFELAIANRSLNDDEKALKYVRKALNADPKNTDYINLEKELTKSNESKNK
>Mature_150_residues
MNRNIFWILLIGMLVIFIALQIRIFTIKEDNIYNKLIKDDMTSGNYDNAQNIAKQTINKNYADDQTYYLSGMIMATINSK
SEGMTEWERGLRMFPKSGLLNFELAIANRSLNDDEKALKYVRKALNADPKNTDYINLEKELTKSNESKNK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17385; Mature: 17385

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRNIFWILLIGMLVIFIALQIRIFTIKEDNIYNKLIKDDMTSGNYDNAQNIAKQTINKN
CCCCCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
YADDQTYYLSGMIMATINSKSEGMTEWERGLRMFPKSGLLNFELAIANRSLNDDEKALKY
CCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHH
VRKALNADPKNTDYINLEKELTKSNESKNK
HHHHHCCCCCCCCEEEHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRNIFWILLIGMLVIFIALQIRIFTIKEDNIYNKLIKDDMTSGNYDNAQNIAKQTINKN
CCCCCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
YADDQTYYLSGMIMATINSKSEGMTEWERGLRMFPKSGLLNFELAIANRSLNDDEKALKY
CCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHH
VRKALNADPKNTDYINLEKELTKSNESKNK
HHHHHCCCCCCCCEEEHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA