| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is mrp [H]
Identifier: 87201346
GI number: 87201346
Start: 3554941
End: 3555906
Strand: Direct
Name: mrp [H]
Synonym: Saro_3334
Alternate gene names: 87201346
Gene position: 3554941-3555906 (Clockwise)
Preceding gene: 87201342
Following gene: 87201347
Centisome position: 99.81
GC content: 68.74
Gene sequence:
>966_bases GTGGGCATCGAAGAACAGGCACTCCGCAATGCATTGCAGGACGCGGCGGGGGATAGGCTGCAATCGCTGAAGATTTCGGG CGACGCGGCGACGATCATGCTGGAGGTCGGCGGGCTCGACCGGCTGGAGCGCGACAGGCTGGAAATGGCGGTGCGCGACG CGGCAAGGCTCGCAGGCGTGGCCGAAGTGCGGCTGGGCATGACGGCGGAGCGCAAGGCACGCGTCATCATCGCCGTGGGA TCGGGCAAGGGCGGGGTCGGCAAGTCCACGGTTTCGGCCAATCTGGCGGTCGCGATGGCCAGGCTCGGGCGCAAGGTCGG CCTCGTCGACGCCGACATCTACGGTCCCTCGCAGCCGCGCCTGCTGATGACGGAGGGCCGCAGGCCCGAGGCCGAGGGCA ACAAGATGATCCCGATCGACAGCCCCTATGGCGTGCCGATGCTGTCGATGGGTCACCTCGTCCAGCCCGGGCAGGCCATC GCGTGGCGCGGGCCGATGGCGGGCAATGCGCTGGGCCAGCTCATCGACGCACACTGGGGCGAGACCGAGATCATCGTCGT TGACTTGCCGCCCGGCACCGGCGACGTCCAGCTTACCATGCTCCAGAAGCACAAGCCGGCGGGCGCGGTCATCGTATCCA CGCCGCAGGACCTTGCGCTGATGGATGCGACGAGAGCCATCGGGCTGTTCGAGCAGGGACAGGTTCCCATCGTCGGGATG GTAGAGAACATGGCCGGATACATCTGCCCGCATTGCGGCGAGGAAAGCGATCCCTTCGGCGTGGGCGGCGCGGAAGCCGC AGCGAAGACGATGGGTCTTCCCTTCCTCGGACGCGTCCCCCTCGACATGGCGATCCGGCGCGAGAGCGATGCCGGCAACC CGCCTGCCGCAGGCGATGGCCCGCAGGCCGAGGCGTTCCTCTCCATCGCGCGCGGCGTCCTCGCCTGGCTCGACGGCAGG CGCTGA
Upstream 100 bases:
>100_bases GTCATGGGCAATGTTATAGGAACGGTTCGCACGAAAAACAGTGTCCTTTCCCCAAAATTCATCTGCTAGGAGGCCGGGAC GAATTGAGCAGGGAATTGGC
Downstream 100 bases:
>100_bases CGCCGATGCGCCTCACGCGGAGGGGGCTGCTGGTGGGGGCAGGGCTCGGCGGAGCCCTGCTTATCGCCTTCCCGCTCATT CCGCGCCGCCACCCGGTTCC
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MGIEEQALRNALQDAAGDRLQSLKISGDAATIMLEVGGLDRLERDRLEMAVRDAARLAGVAEVRLGMTAERKARVIIAVG SGKGGVGKSTVSANLAVAMARLGRKVGLVDADIYGPSQPRLLMTEGRRPEAEGNKMIPIDSPYGVPMLSMGHLVQPGQAI AWRGPMAGNALGQLIDAHWGETEIIVVDLPPGTGDVQLTMLQKHKPAGAVIVSTPQDLALMDATRAIGLFEQGQVPIVGM VENMAGYICPHCGEESDPFGVGGAEAAAKTMGLPFLGRVPLDMAIRRESDAGNPPAAGDGPQAEAFLSIARGVLAWLDGR R
Sequences:
>Translated_321_residues MGIEEQALRNALQDAAGDRLQSLKISGDAATIMLEVGGLDRLERDRLEMAVRDAARLAGVAEVRLGMTAERKARVIIAVG SGKGGVGKSTVSANLAVAMARLGRKVGLVDADIYGPSQPRLLMTEGRRPEAEGNKMIPIDSPYGVPMLSMGHLVQPGQAI AWRGPMAGNALGQLIDAHWGETEIIVVDLPPGTGDVQLTMLQKHKPAGAVIVSTPQDLALMDATRAIGLFEQGQVPIVGM VENMAGYICPHCGEESDPFGVGGAEAAAKTMGLPFLGRVPLDMAIRRESDAGNPPAAGDGPQAEAFLSIARGVLAWLDGR R >Mature_320_residues GIEEQALRNALQDAAGDRLQSLKISGDAATIMLEVGGLDRLERDRLEMAVRDAARLAGVAEVRLGMTAERKARVIIAVGS GKGGVGKSTVSANLAVAMARLGRKVGLVDADIYGPSQPRLLMTEGRRPEAEGNKMIPIDSPYGVPMLSMGHLVQPGQAIA WRGPMAGNALGQLIDAHWGETEIIVVDLPPGTGDVQLTMLQKHKPAGAVIVSTPQDLALMDATRAIGLFEQGQVPIVGMV ENMAGYICPHCGEESDPFGVGGAEAAAKTMGLPFLGRVPLDMAIRRESDAGNPPAAGDGPQAEAFLSIARGVLAWLDGRR
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=240, Percent_Identity=44.1666666666667, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI6912540, Length=250, Percent_Identity=40, Blast_Score=177, Evalue=8e-45, Organism=Homo sapiens, GI118572611, Length=271, Percent_Identity=36.90036900369, Blast_Score=169, Evalue=3e-42, Organism=Escherichia coli, GI87082045, Length=240, Percent_Identity=47.5, Blast_Score=209, Evalue=3e-55, Organism=Caenorhabditis elegans, GI25143050, Length=265, Percent_Identity=35.4716981132075, Blast_Score=154, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6322188, Length=216, Percent_Identity=36.5740740740741, Blast_Score=162, Evalue=9e-41, Organism=Saccharomyces cerevisiae, GI6321347, Length=250, Percent_Identity=34.8, Blast_Score=140, Evalue=3e-34, Organism=Drosophila melanogaster, GI221511043, Length=250, Percent_Identity=36.8, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24667611, Length=218, Percent_Identity=38.9908256880734, Blast_Score=158, Evalue=4e-39, Organism=Drosophila melanogaster, GI19921440, Length=247, Percent_Identity=36.4372469635627, Blast_Score=146, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 33620; Mature: 33489
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIEEQALRNALQDAAGDRLQSLKISGDAATIMLEVGGLDRLERDRLEMAVRDAARLAGV CCCHHHHHHHHHHHHHCCHHHEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH AEVRLGMTAERKARVIIAVGSGKGGVGKSTVSANLAVAMARLGRKVGLVDADIYGPSQPR HHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCE LLMTEGRRPEAEGNKMIPIDSPYGVPMLSMGHLVQPGQAIAWRGPMAGNALGQLIDAHWG EEEECCCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCC ETEIIVVDLPPGTGDVQLTMLQKHKPAGAVIVSTPQDLALMDATRAIGLFEQGQVPIVGM CEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHCHHCCCCCCEEEH VENMAGYICPHCGEESDPFGVGGAEAAAKTMGLPFLGRVPLDMAIRRESDAGNPPAAGDG HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHEEECCCCCCCCCCCCCC PQAEAFLSIARGVLAWLDGRR CHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GIEEQALRNALQDAAGDRLQSLKISGDAATIMLEVGGLDRLERDRLEMAVRDAARLAGV CCHHHHHHHHHHHHHCCHHHEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH AEVRLGMTAERKARVIIAVGSGKGGVGKSTVSANLAVAMARLGRKVGLVDADIYGPSQPR HHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCE LLMTEGRRPEAEGNKMIPIDSPYGVPMLSMGHLVQPGQAIAWRGPMAGNALGQLIDAHWG EEEECCCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCC ETEIIVVDLPPGTGDVQLTMLQKHKPAGAVIVSTPQDLALMDATRAIGLFEQGQVPIVGM CEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHCHHCCCCCCEEEH VENMAGYICPHCGEESDPFGVGGAEAAAKTMGLPFLGRVPLDMAIRRESDAGNPPAAGDG HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHEEECCCCCCCCCCCCCC PQAEAFLSIARGVLAWLDGRR CHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]