| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201310
Identifier: 87201310
GI number: 87201310
Start: 3519032
End: 3519457
Strand: Direct
Name: 87201310
Synonym: Saro_3298
Alternate gene names: NA
Gene position: 3519032-3519457 (Clockwise)
Preceding gene: 87201309
Following gene: 87201311
Centisome position: 98.81
GC content: 71.6
Gene sequence:
>426_bases GTGGCGACGCCGACACCGGCCGCTCCCACGCCAACCCGCACTGCTTCCGCCGTGCCGCCGACCGGCCCCGGCATGCCTTC CTTTGCGCGCGATCCCCAGACCGTGCTCGATGCCTTCGCTTCCGCCATCGAAGCACGCGACTGGAAGGCCGTGCGGGCGT ACTGGGGCGACCGTGGCAATCGCAGCGGGCTTGACGAAGCCGCCTTCGCCGCGCGGTGGAGCGTGCTCGAGGCGCCCGAG GTGACCGTCGGCGACGGCACTCAGGAAGGCGCGGCGGGTTCGCTCTACTACACCGCGCCCGTGACCATTCGCGACGGCGA ACGCGAACTGGCCGGCGAGGTCACCCTGCGCCGCGCGAACGATGTGCCCGGTGCCACGACAGAGCAGTTGCGCTGGCATA TCGAGAGCGCCACGCTCGCGCCCTGA
Upstream 100 bases:
>100_bases CCCCTGTCGTCTCGCCGCGGCGCTTGCTGCATTGCCGCTTGCCGCCTGCAACAGCGATCCTTCCCCGCCGACCCCCACCG CTATGACAAGCGGGACGCCG
Downstream 100 bases:
>100_bases CGTTGCGGCGCCCGATCCGCGCGGCCCCATCGCGGTCCTTGCAAAGATTGTAAGCAACACATACAGAACCGGGCAAGCCT CGGCCGCTGCGTATTCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MATPTPAAPTPTRTASAVPPTGPGMPSFARDPQTVLDAFASAIEARDWKAVRAYWGDRGNRSGLDEAAFAARWSVLEAPE VTVGDGTQEGAAGSLYYTAPVTIRDGERELAGEVTLRRANDVPGATTEQLRWHIESATLAP
Sequences:
>Translated_141_residues MATPTPAAPTPTRTASAVPPTGPGMPSFARDPQTVLDAFASAIEARDWKAVRAYWGDRGNRSGLDEAAFAARWSVLEAPE VTVGDGTQEGAAGSLYYTAPVTIRDGERELAGEVTLRRANDVPGATTEQLRWHIESATLAP >Mature_140_residues ATPTPAAPTPTRTASAVPPTGPGMPSFARDPQTVLDAFASAIEARDWKAVRAYWGDRGNRSGLDEAAFAARWSVLEAPEV TVGDGTQEGAAGSLYYTAPVTIRDGERELAGEVTLRRANDVPGATTEQLRWHIESATLAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14908; Mature: 14776
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPTPAAPTPTRTASAVPPTGPGMPSFARDPQTVLDAFASAIEARDWKAVRAYWGDRGN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCC RSGLDEAAFAARWSVLEAPEVTVGDGTQEGAAGSLYYTAPVTIRDGERELAGEVTLRRAN CCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCEEEECCCHHHHHHEEEEECC DVPGATTEQLRWHIESATLAP CCCCCCHHHHEEECCCCCCCC >Mature Secondary Structure ATPTPAAPTPTRTASAVPPTGPGMPSFARDPQTVLDAFASAIEARDWKAVRAYWGDRGN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCC RSGLDEAAFAARWSVLEAPEVTVGDGTQEGAAGSLYYTAPVTIRDGERELAGEVTLRRAN CCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCEEEECCCHHHHHHEEEEECC DVPGATTEQLRWHIESATLAP CCCCCCHHHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA