| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is argB
Identifier: 87201309
GI number: 87201309
Start: 3517962
End: 3518873
Strand: Direct
Name: argB
Synonym: Saro_3297
Alternate gene names: 87201309
Gene position: 3517962-3518873 (Clockwise)
Preceding gene: 87201308
Following gene: 87201310
Centisome position: 98.78
GC content: 67.54
Gene sequence:
>912_bases ATGAGCCAGAACCACGACCCCGCAATGCTTGCCAAGGCCGAAACGCTGACCGAGGCGCTGCCCTATCTCCAGCGCTATGC GGGCAAGACCTTCGTGGTGAAGTACGGCGGCCACGCGATGGGCGATCCCGAACTCGCGCAGGACTTCGCCGAAGATATCG TGCTGCTCAAGGCCGTGGGCATCAACCCTGTCGTGGTCCACGGCGGCGGGCCCCAGATCGGTCGCATGCTCAAGGCGCTC GGCATCGAATCGCGGTTCGTCGACGGCCTGCGCGTCACCGACAAGCAAACGGCCGAAGTCGCAGAAATGGTCCTCGCCGG CGCGATCAACAAGGAACTGGTAAGCTGGATCGCCCGCGCGGGCGGCAAGGCCATCGGCATTTCCGGCAAGGACGGGGGCA TGGTCATCGCCCGCAAGGTCGAGGCCAAGAAGGCGCCCAAGGCCGTGGCCGATGCTGAAAGCGGCGATCCCATCGTCGTC GACCTCGGCTTCGTGGGCGAGCCCGACCGGATCGACACGACCGTCATCGACACGATCTGCAAGGCCGGCATGATCCCGGT CATCGCCCCCATCGGCGTTGGCGAGGACGGCGAGACGTACAACATCAACGCCGACACGATGGCCGGCTCCATCGCCGCCG CGCTGGGCGCCGCGCGCCTGTTCCTGCTGACCGACGTTCCCGGCGTGCTCGACAAGGACAAGAACCTGCTCACCGACCTT CGCCCCGCCGACATCGCGCGGCTGGCCGAGGACGGCACGATCAGCGGCGGCATGATCCCGAAGCTGGAAACCTGCGTCCA CGCGGTCGAGGCGGGCTGCGAGGCAACCGTCGTGCTCGACGGCCGCGTGCCCCACGCGATGCTCCTCGAAATCTTCACGG CGCGCGGCGCGGGCACCCTGATCCGCGCCTGA
Upstream 100 bases:
>100_bases GCTGGCCCCAGCGATGTAGCGCGACCTTGCCGCAGATCCTGCCGCGATCGCGCGATCAGCAATATTGGATTCCGCCTCCA TTGCGCGTAAGGGCCCGCGC
Downstream 100 bases:
>100_bases AGGCTGCATTAAAGACGGGAACCGGAAGGCGTGCCGCTCGTCAGTGCGGCATGATCCGCCCCTGTCGTCTCGCCGCGGCG CTTGCTGCATTGCCGCTTGC
Product: acetylglutamate kinase
Products: NA
Alternate protein names: N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; AGK
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSQNHDPAMLAKAETLTEALPYLQRYAGKTFVVKYGGHAMGDPELAQDFAEDIVLLKAVGINPVVVHGGGPQIGRMLKAL GIESRFVDGLRVTDKQTAEVAEMVLAGAINKELVSWIARAGGKAIGISGKDGGMVIARKVEAKKAPKAVADAESGDPIVV DLGFVGEPDRIDTTVIDTICKAGMIPVIAPIGVGEDGETYNINADTMAGSIAAALGAARLFLLTDVPGVLDKDKNLLTDL RPADIARLAEDGTISGGMIPKLETCVHAVEAGCEATVVLDGRVPHAMLLEIFTARGAGTLIRA
Sequences:
>Translated_303_residues MSQNHDPAMLAKAETLTEALPYLQRYAGKTFVVKYGGHAMGDPELAQDFAEDIVLLKAVGINPVVVHGGGPQIGRMLKAL GIESRFVDGLRVTDKQTAEVAEMVLAGAINKELVSWIARAGGKAIGISGKDGGMVIARKVEAKKAPKAVADAESGDPIVV DLGFVGEPDRIDTTVIDTICKAGMIPVIAPIGVGEDGETYNINADTMAGSIAAALGAARLFLLTDVPGVLDKDKNLLTDL RPADIARLAEDGTISGGMIPKLETCVHAVEAGCEATVVLDGRVPHAMLLEIFTARGAGTLIRA >Mature_302_residues SQNHDPAMLAKAETLTEALPYLQRYAGKTFVVKYGGHAMGDPELAQDFAEDIVLLKAVGINPVVVHGGGPQIGRMLKALG IESRFVDGLRVTDKQTAEVAEMVLAGAINKELVSWIARAGGKAIGISGKDGGMVIARKVEAKKAPKAVADAESGDPIVVD LGFVGEPDRIDTTVIDTICKAGMIPVIAPIGVGEDGETYNINADTMAGSIAAALGAARLFLLTDVPGVLDKDKNLLTDLR PADIARLAEDGTISGGMIPKLETCVHAVEAGCEATVVLDGRVPHAMLLEIFTARGAGTLIRA
Specific function: Arginine biosynthesis; first step. [C]
COG id: COG0548
COG function: function code E; Acetylglutamate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetylglutamate kinase family
Homologues:
Organism=Escherichia coli, GI1789181, Length=296, Percent_Identity=27.7027027027027, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI145693208, Length=239, Percent_Identity=28.8702928870293, Blast_Score=87, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6320913, Length=289, Percent_Identity=25.2595155709343, Blast_Score=79, Evalue=9e-16,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): ARGB_NOVAD (Q2G341)
Other databases:
- EMBL: CP000248 - RefSeq: YP_498566.1 - ProteinModelPortal: Q2G341 - SMR: Q2G341 - STRING: Q2G341 - GeneID: 3915944 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_3297 - NMPDR: fig|48935.1.peg.3895 - eggNOG: COG0548 - HOGENOM: HBG497643 - OMA: MDIVEMV - PhylomeDB: Q2G341 - ProtClustDB: PRK00942 - BioCyc: NARO279238:SARO_3297-MONOMER - GO: GO:0005737 - HAMAP: MF_00082_B - InterPro: IPR004662 - InterPro: IPR001048 - InterPro: IPR001057 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000728 - PRINTS: PR00474 - TIGRFAMs: TIGR00761
Pfam domain/function: PF00696 AA_kinase; SSF53633 Aa_kinase
EC number: =2.7.2.8
Molecular weight: Translated: 31542; Mature: 31411
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: BINDING 91-91 BINDING 201-201
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNHDPAMLAKAETLTEALPYLQRYAGKTFVVKYGGHAMGDPELAQDFAEDIVLLKAVG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHEECC INPVVVHGGGPQIGRMLKALGIESRFVDGLRVTDKQTAEVAEMVLAGAINKELVSWIARA CCEEEEECCCHHHHHHHHHHCCHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC GGKAIGISGKDGGMVIARKVEAKKAPKAVADAESGDPIVVDLGFVGEPDRIDTTVIDTIC CCCEEEECCCCCCEEEEEEHHHHHCCCHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHH KAGMIPVIAPIGVGEDGETYNINADTMAGSIAAALGAARLFLLTDVPGVLDKDKNLLTDL HCCCCEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHCC RPADIARLAEDGTISGGMIPKLETCVHAVEAGCEATVVLDGRVPHAMLLEIFTARGAGTL CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCC IRA CCC >Mature Secondary Structure SQNHDPAMLAKAETLTEALPYLQRYAGKTFVVKYGGHAMGDPELAQDFAEDIVLLKAVG CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHEECC INPVVVHGGGPQIGRMLKALGIESRFVDGLRVTDKQTAEVAEMVLAGAINKELVSWIARA CCEEEEECCCHHHHHHHHHHCCHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC GGKAIGISGKDGGMVIARKVEAKKAPKAVADAESGDPIVVDLGFVGEPDRIDTTVIDTIC CCCEEEECCCCCCEEEEEEHHHHHCCCHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHH KAGMIPVIAPIGVGEDGETYNINADTMAGSIAAALGAARLFLLTDVPGVLDKDKNLLTDL HCCCCEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHCC RPADIARLAEDGTISGGMIPKLETCVHAVEAGCEATVVLDGRVPHAMLLEIFTARGAGTL CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCC IRA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA