Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is ygjT [C]

Identifier: 87201211

GI number: 87201211

Start: 3415696

End: 3416685

Strand: Direct

Name: ygjT [C]

Synonym: Saro_3199

Alternate gene names: 87201211

Gene position: 3415696-3416685 (Clockwise)

Preceding gene: 87201210

Following gene: 87201216

Centisome position: 95.9

GC content: 60.61

Gene sequence:

>990_bases
ATGGAATTCCTCTTCACAGATTGGCTCGGCACGCCCGCGTGGTTCTGGCTAGCCTTCCTCGGCCTGGTCGTGGTGCTGAC
CGCATTCGACCTTGGCGTCCTCCACAAGGAGGACAAGGCCATGGGCATCGGCGAATCGCTGAAGCTTACGGCGTTCTACA
TCACCATTGCCCTGGCATTCGGCGCCTGGGTCTGGGTGGAGAAGGGCGCGGACCTCGGCATGAAGTACTATACCGGGTTC
TTCATCGAGAAAGCGCTGTCGATCGACAATGTCTTCGTCATCAGCCTGATCTTCACCTTCTTCGCCATTCCGGCACGGTT
TCAGTACCGGGCACTGCTGTGGGGCATCGTCGCGGTCATCTTCCTGCGCGGCGCGATGATCGCCGGCGGCGCGGCGCTGG
TAGAGCAGGCCTACTGGGTGCTCTACATCTTCGCGGCGTTCCTGGTGTTCACCGGTATCAAGATGTTCTTCACTTCCGAC
CACGATCCTGACATCGGCAACAATCCGGTCGTCCGCTGGATCAGCCGTCACATGCGCGTGACCAAGGAACTGCACGACCA
GCACTTCTTCGTGAAGGTCCCGGACGGGAAGACCGGCAAGATGGTCAATGCAGCGACGCCGCTGTTCCTTGCGCTGGTCG
TCATCAACCTTGCCGACCTGGTGTTCGCGGTGGACTCGGTCCCGGCGATCTTCGCGATCACGACCGACACCTTCGTGGTT
TACACGTCGAACATCATGGCGATCCTCGGCCTGCGCGCACTCTATTTCGCGCTGGCGGCGATGATCGATCGCTTCGCCTA
CCTCAAGTATGCGCTAGCGGCGGTGCTGGTGTTCATCGGCTCCAAGATCTTCGTCTCGGACTTCATCCTGGGCGGCGACA
AGTTCCCGCCGGTGATGAGCCTTGCCGTTACCATGGCGATCATTGCCGGCGGCGTGGTGTTCTCGCTCTACAAGACGCGG
GGACACGAAGGCACGAAGCCCGCGGTTTGA

Upstream 100 bases:

>100_bases
TGGCGCGCCTGCTTTCGCGCCGTTCGGCAACAATCTGAAATAGAGGAACGCTCCCCGCGCCCCGTGCATTTCGGGGCGCG
GCGGGCACTGGAGATACCGA

Downstream 100 bases:

>100_bases
TTTATCCCCCCCTCCCGCGCAAGGGAGGGGGCTTCCATTCAGGCTACCACTGCCGGATCTCTTCAAGGAAACGGTCGCCG
TAGGCGTCGAGCTTGCGGGT

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MEFLFTDWLGTPAWFWLAFLGLVVVLTAFDLGVLHKEDKAMGIGESLKLTAFYITIALAFGAWVWVEKGADLGMKYYTGF
FIEKALSIDNVFVISLIFTFFAIPARFQYRALLWGIVAVIFLRGAMIAGGAALVEQAYWVLYIFAAFLVFTGIKMFFTSD
HDPDIGNNPVVRWISRHMRVTKELHDQHFFVKVPDGKTGKMVNAATPLFLALVVINLADLVFAVDSVPAIFAITTDTFVV
YTSNIMAILGLRALYFALAAMIDRFAYLKYALAAVLVFIGSKIFVSDFILGGDKFPPVMSLAVTMAIIAGGVVFSLYKTR
GHEGTKPAV

Sequences:

>Translated_329_residues
MEFLFTDWLGTPAWFWLAFLGLVVVLTAFDLGVLHKEDKAMGIGESLKLTAFYITIALAFGAWVWVEKGADLGMKYYTGF
FIEKALSIDNVFVISLIFTFFAIPARFQYRALLWGIVAVIFLRGAMIAGGAALVEQAYWVLYIFAAFLVFTGIKMFFTSD
HDPDIGNNPVVRWISRHMRVTKELHDQHFFVKVPDGKTGKMVNAATPLFLALVVINLADLVFAVDSVPAIFAITTDTFVV
YTSNIMAILGLRALYFALAAMIDRFAYLKYALAAVLVFIGSKIFVSDFILGGDKFPPVMSLAVTMAIIAGGVVFSLYKTR
GHEGTKPAV
>Mature_329_residues
MEFLFTDWLGTPAWFWLAFLGLVVVLTAFDLGVLHKEDKAMGIGESLKLTAFYITIALAFGAWVWVEKGADLGMKYYTGF
FIEKALSIDNVFVISLIFTFFAIPARFQYRALLWGIVAVIFLRGAMIAGGAALVEQAYWVLYIFAAFLVFTGIKMFFTSD
HDPDIGNNPVVRWISRHMRVTKELHDQHFFVKVPDGKTGKMVNAATPLFLALVVINLADLVFAVDSVPAIFAITTDTFVV
YTSNIMAILGLRALYFALAAMIDRFAYLKYALAAVLVFIGSKIFVSDFILGGDKFPPVMSLAVTMAIIAGGVVFSLYKTR
GHEGTKPAV

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

Organism=Escherichia coli, GI48994922, Length=327, Percent_Identity=40.3669724770642, Blast_Score=230, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496
- InterPro:   IPR022369 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 36403; Mature: 36403

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLFTDWLGTPAWFWLAFLGLVVVLTAFDLGVLHKEDKAMGIGESLKLTAFYITIALAF
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
GAWVWVEKGADLGMKYYTGFFIEKALSIDNVFVISLIFTFFAIPARFQYRALLWGIVAVI
HHHHEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FLRGAMIAGGAALVEQAYWVLYIFAAFLVFTGIKMFFTSDHDPDIGNNPVVRWISRHMRV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHH
TKELHDQHFFVKVPDGKTGKMVNAATPLFLALVVINLADLVFAVDSVPAIFAITTDTFVV
HHHHCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEE
YTSNIMAILGLRALYFALAAMIDRFAYLKYALAAVLVFIGSKIFVSDFILGGDKFPPVMS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHH
LAVTMAIIAGGVVFSLYKTRGHEGTKPAV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEFLFTDWLGTPAWFWLAFLGLVVVLTAFDLGVLHKEDKAMGIGESLKLTAFYITIALAF
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
GAWVWVEKGADLGMKYYTGFFIEKALSIDNVFVISLIFTFFAIPARFQYRALLWGIVAVI
HHHHEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FLRGAMIAGGAALVEQAYWVLYIFAAFLVFTGIKMFFTSDHDPDIGNNPVVRWISRHMRV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHH
TKELHDQHFFVKVPDGKTGKMVNAATPLFLALVVINLADLVFAVDSVPAIFAITTDTFVV
HHHHCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEE
YTSNIMAILGLRALYFALAAMIDRFAYLKYALAAVLVFIGSKIFVSDFILGGDKFPPVMS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHH
LAVTMAIIAGGVVFSLYKTRGHEGTKPAV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]