| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201216
Identifier: 87201216
GI number: 87201216
Start: 3420940
End: 3421236
Strand: Direct
Name: 87201216
Synonym: Saro_3204
Alternate gene names: NA
Gene position: 3420940-3421236 (Clockwise)
Preceding gene: 87201211
Following gene: 87201217
Centisome position: 96.05
GC content: 62.96
Gene sequence:
>297_bases ATGACCTTTGACCTCGGCAAGGCCCTTTTGCGCAAGGAGGAATACGAATCCGCGCGACTGACCGAGTTCGATTTTGCCGA GATGGTACGGGCCTTGAAGGCACTGGCAGGAGAACTGGGCGCGGACGTGGAGCCGATGCTGGGCATTCTTGCCGAAAATG GACTGGCTTCGGCGCTGCTGCATCTGCGGGCGATTGCACAGCGCGACGTGGGGGCGGACTACCTGCGATGCCGCGCCGTG GCCCGAGCGAAGCTGATCGAGGAACGCGGAGATCCCTCTCCGGTAAGGCTCGGCTGA
Upstream 100 bases:
>100_bases GTCATTGCTTGTCCTCCCGATGCGCCATCGTCCTTGCGCGTTCGCGACGGCTTGTCCAATCGACCTCTAAGGCCATATCG CCTTCACCAGGAGACGGCCC
Downstream 100 bases:
>100_bases AATGTGCCTTACTGCTTAACCATCACCGGGCTCAGGCGTGGTGCCCTGCCCTGGGTTAAGCCCGCATTCTCACAAGCCTG ACAGCTTTCCCTGATGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTFDLGKALLRKEEYESARLTEFDFAEMVRALKALAGELGADVEPMLGILAENGLASALLHLRAIAQRDVGADYLRCRAV ARAKLIEERGDPSPVRLG
Sequences:
>Translated_98_residues MTFDLGKALLRKEEYESARLTEFDFAEMVRALKALAGELGADVEPMLGILAENGLASALLHLRAIAQRDVGADYLRCRAV ARAKLIEERGDPSPVRLG >Mature_97_residues TFDLGKALLRKEEYESARLTEFDFAEMVRALKALAGELGADVEPMLGILAENGLASALLHLRAIAQRDVGADYLRCRAVA RAKLIEERGDPSPVRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10713; Mature: 10581
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDLGKALLRKEEYESARLTEFDFAEMVRALKALAGELGADVEPMLGILAENGLASALL CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHH HLRAIAQRDVGADYLRCRAVARAKLIEERGDPSPVRLG HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TFDLGKALLRKEEYESARLTEFDFAEMVRALKALAGELGADVEPMLGILAENGLASALL CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHH HLRAIAQRDVGADYLRCRAVARAKLIEERGDPSPVRLG HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA