| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is phhA
Identifier: 87201199
GI number: 87201199
Start: 3407491
End: 3408429
Strand: Reverse
Name: phhA
Synonym: Saro_3187
Alternate gene names: 87201199
Gene position: 3408429-3407491 (Counterclockwise)
Preceding gene: 87201204
Following gene: 87201194
Centisome position: 95.7
GC content: 66.03
Gene sequence:
>939_bases ATGTTGACAACGACCGCACCCGCTTTCGACTATGCCTGCCTACCGGAAATGCCGGAGGGCGTGTTCACCGCGCCCTTGCG CCGCCCGGACCGCGTGGGCGAGGACTGGCTCGAGCCTGCGCAACACCGCTACACCGCGCAGGAGCACGCGATCTGGGATG AGCTTTACGCCCGCCAGATGGAACTTCTGCCCGGCAGGGCCTGCAGCGCCTTCCTGCAGGGCCTGGAGCGGCTCGACCTC GGGCGCGGAGGCGTGCCCGACTTCGCACGGCTTTCGTCCGAGCTTGGCGCGCTGACTGGCTGGAGCGTCGTGCCCGTGCC GATGCTGATCCCCGATCACGTGTTCTTCTGGCACCTGGCGAACCGCCGCTTTCCCGCAGGCAACTTCATCCGCACGCGCG AGACGTTCGATTACATCCAGGAGCCCGACGTCTTCCACGATGTCTTCGGCCACGTACCGATGCTGACCGACCCGACTTAT GCCGACTACATGCAGGAGTATGGCCGCGCCGGGTGGAAGGCGATGCGTTACAACCGGCTCAAGGCGCTGGGCGCGCTCTA CTGGTACACGGTGGAGTTCGGGCTGGTGATCGAGGACGGCGCGCCCAAGGTCTATGGTGCGGGGATCCTCTCCGGCCCGC GCGAGGCGGTGTTCGCGCTGGAGGGGCAGTCGCCCAACCGCATCATGCTCAACGTCGACCGGGTCATGCGCACGGATTAC GTGATCGACGATCTCCAGCCGACCTATTTCGTGATCGAGAGCTTCGCGGACCTCTATCACCAGACGGTCGAGCGCGATTT CGACCGGCTCTACCGCGCGCTCGGCGCCGGGTTCACTTATGCCAACACTGCGGTGATCGACGTGGACGACGTGCTGCACC GGGGCACGCTGGAATACCACCTGCGGGGCGGGCGCGGATCGGGCGCAATTCCGGTCTGA
Upstream 100 bases:
>100_bases CGGGCCGTTGCGGTAGAATCAGGACAAAGTCAAGCACGGAGAGACCGACGGAGGCATTTGCCCGAACCTCGATTGCGTGC TATTGGTTGCATTGGAAACC
Downstream 100 bases:
>100_bases TTTCCGGTCCCGGCTGCGACAAGCAAGCAAAAACCCGGCGTAGCCGAGGCTCCGCCGGGTTTTCGGTTCCGTGACCGGAT GGCTGCCAGCCGGTACGGGA
Product: phenylalanine 4-monooxygenase
Products: NA
Alternate protein names: PAH; Phe-4-monooxygenase [H]
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MLTTTAPAFDYACLPEMPEGVFTAPLRRPDRVGEDWLEPAQHRYTAQEHAIWDELYARQMELLPGRACSAFLQGLERLDL GRGGVPDFARLSSELGALTGWSVVPVPMLIPDHVFFWHLANRRFPAGNFIRTRETFDYIQEPDVFHDVFGHVPMLTDPTY ADYMQEYGRAGWKAMRYNRLKALGALYWYTVEFGLVIEDGAPKVYGAGILSGPREAVFALEGQSPNRIMLNVDRVMRTDY VIDDLQPTYFVIESFADLYHQTVERDFDRLYRALGAGFTYANTAVIDVDDVLHRGTLEYHLRGGRGSGAIPV
Sequences:
>Translated_312_residues MLTTTAPAFDYACLPEMPEGVFTAPLRRPDRVGEDWLEPAQHRYTAQEHAIWDELYARQMELLPGRACSAFLQGLERLDL GRGGVPDFARLSSELGALTGWSVVPVPMLIPDHVFFWHLANRRFPAGNFIRTRETFDYIQEPDVFHDVFGHVPMLTDPTY ADYMQEYGRAGWKAMRYNRLKALGALYWYTVEFGLVIEDGAPKVYGAGILSGPREAVFALEGQSPNRIMLNVDRVMRTDY VIDDLQPTYFVIESFADLYHQTVERDFDRLYRALGAGFTYANTAVIDVDDVLHRGTLEYHLRGGRGSGAIPV >Mature_312_residues MLTTTAPAFDYACLPEMPEGVFTAPLRRPDRVGEDWLEPAQHRYTAQEHAIWDELYARQMELLPGRACSAFLQGLERLDL GRGGVPDFARLSSELGALTGWSVVPVPMLIPDHVFFWHLANRRFPAGNFIRTRETFDYIQEPDVFHDVFGHVPMLTDPTY ADYMQEYGRAGWKAMRYNRLKALGALYWYTVEFGLVIEDGAPKVYGAGILSGPREAVFALEGQSPNRIMLNVDRVMRTDY VIDDLQPTYFVIESFADLYHQTVERDFDRLYRALGAGFTYANTAVIDVDDVLHRGTLEYHLRGGRGSGAIPV
Specific function: Unknown
COG id: COG3186
COG function: function code E; Phenylalanine-4-hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family [H]
Homologues:
Organism=Homo sapiens, GI88900503, Length=218, Percent_Identity=34.8623853211009, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI88900505, Length=218, Percent_Identity=34.8623853211009, Blast_Score=118, Evalue=8e-27, Organism=Homo sapiens, GI88900501, Length=218, Percent_Identity=34.8623853211009, Blast_Score=117, Evalue=9e-27, Organism=Homo sapiens, GI4759248, Length=234, Percent_Identity=31.6239316239316, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI4557819, Length=218, Percent_Identity=31.1926605504587, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI31795563, Length=230, Percent_Identity=31.304347826087, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17531391, Length=242, Percent_Identity=33.4710743801653, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI115532103, Length=231, Percent_Identity=32.9004329004329, Blast_Score=114, Evalue=7e-26, Organism=Caenorhabditis elegans, GI115533973, Length=231, Percent_Identity=32.9004329004329, Blast_Score=114, Evalue=7e-26, Organism=Caenorhabditis elegans, GI71980736, Length=238, Percent_Identity=31.0924369747899, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71980731, Length=149, Percent_Identity=28.8590604026846, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI17136776, Length=218, Percent_Identity=31.1926605504587, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI17136774, Length=218, Percent_Identity=31.1926605504587, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI62472054, Length=232, Percent_Identity=30.6034482758621, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI24660393, Length=232, Percent_Identity=30.6034482758621, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI24654994, Length=225, Percent_Identity=29.3333333333333, Blast_Score=90, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001273 - InterPro: IPR018301 - InterPro: IPR019774 - InterPro: IPR005960 [H]
Pfam domain/function: PF00351 Biopterin_H [H]
EC number: =1.14.16.1 [H]
Molecular weight: Translated: 35409; Mature: 35409
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00367 BIOPTERIN_HYDROXYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTTTAPAFDYACLPEMPEGVFTAPLRRPDRVGEDWLEPAQHRYTAQEHAIWDELYARQM CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLPGRACSAFLQGLERLDLGRGGVPDFARLSSELGALTGWSVVPVPMLIPDHVFFWHLA HHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCCHHHEEHHH NRRFPAGNFIRTRETFDYIQEPDVFHDVFGHVPMLTDPTYADYMQEYGRAGWKAMRYNRL CCCCCCCCCEEHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KALGALYWYTVEFGLVIEDGAPKVYGAGILSGPREAVFALEGQSPNRIMLNVDRVMRTDY HHHHHHHEEEEEEEEEEECCCCCEEECCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHH VIDDLQPTYFVIESFADLYHQTVERDFDRLYRALGAGFTYANTAVIDVDDVLHRGTLEYH HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEHHHHHHCCCEEEE LRGGRGSGAIPV EECCCCCCCCCC >Mature Secondary Structure MLTTTAPAFDYACLPEMPEGVFTAPLRRPDRVGEDWLEPAQHRYTAQEHAIWDELYARQM CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLPGRACSAFLQGLERLDLGRGGVPDFARLSSELGALTGWSVVPVPMLIPDHVFFWHLA HHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCCHHHEEHHH NRRFPAGNFIRTRETFDYIQEPDVFHDVFGHVPMLTDPTYADYMQEYGRAGWKAMRYNRL CCCCCCCCCEEHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KALGALYWYTVEFGLVIEDGAPKVYGAGILSGPREAVFALEGQSPNRIMLNVDRVMRTDY HHHHHHHEEEEEEEEEEECCCCCEEECCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHH VIDDLQPTYFVIESFADLYHQTVERDFDRLYRALGAGFTYANTAVIDVDDVLHRGTLEYH HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEHHHHHHCCCEEEE LRGGRGSGAIPV EECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]