Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87201177

Identifier: 87201177

GI number: 87201177

Start: 3379785

End: 3380327

Strand: Reverse

Name: 87201177

Synonym: Saro_3165

Alternate gene names: NA

Gene position: 3380327-3379785 (Counterclockwise)

Preceding gene: 87201180

Following gene: 87201176

Centisome position: 94.91

GC content: 66.85

Gene sequence:

>543_bases
ATGTTTCATAAAGAGCTGGAAAGACGGGATTTTATTGGAACTCTTGGGGCGCTTCTCGGCCTCGCGACGCTCCCCGCCAG
CGCTCTTGCGGCGAGTCAGCAGGCGTCGATCCCGGCTTCGCAGGTGGCGCTCGTCGCTGCGGTGGCGGACACGATGATTC
CCAGGACCGACACTCCCGGCGCGGTCGATGTCGGGGTGCCGAAGCTGCTGTCGGCCCTGCTCGCCAACTGGGCCGCGCCG
GCCACCCGCACCGCGCTCCTCGGGCAGTTCGATGCCATCGACGTGGCTGCGCGCGGGGCCAAGGGCAAGCCCTTTGCGGC
GCTGAAGCCGGCTGATCGGCTTGCCGTGCTGAAGGCCTATGACGCGGCCAGTTTCACCCAGGCGGACTACAAGCGCCTGC
GCGGCCTGATCCTGATCCTCTATTACAACTCCGAACCGGGTGCGACCGTGGAACTGCGCTACGAACACGCGCCTGGCGCC
TACGAGCCCTCCCTGCCGATCACGCCGCAGACCCGCGCGTGGGCTGGCATGTCGTTCTTCTGA

Upstream 100 bases:

>100_bases
AGCGTTGACAATTTGAGCCCCTCGATCCCATACCTTTTGCCGAAGATAGTCGCTGCAAGCGCGCAAAGACGCAACAGCGA
ACTGTTCGGGAGACGGGCAA

Downstream 100 bases:

>100_bases
AGCGGGCGAGGGAGCAACGGAAATGTTCGACGCAATCGTAATCGGATCGGGAATGAGCGGCGGCATCGCCGCCAAGGAAC
TGTGCGAACGCGGCCTCAAG

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MFHKELERRDFIGTLGALLGLATLPASALAASQQASIPASQVALVAAVADTMIPRTDTPGAVDVGVPKLLSALLANWAAP
ATRTALLGQFDAIDVAARGAKGKPFAALKPADRLAVLKAYDAASFTQADYKRLRGLILILYYNSEPGATVELRYEHAPGA
YEPSLPITPQTRAWAGMSFF

Sequences:

>Translated_180_residues
MFHKELERRDFIGTLGALLGLATLPASALAASQQASIPASQVALVAAVADTMIPRTDTPGAVDVGVPKLLSALLANWAAP
ATRTALLGQFDAIDVAARGAKGKPFAALKPADRLAVLKAYDAASFTQADYKRLRGLILILYYNSEPGATVELRYEHAPGA
YEPSLPITPQTRAWAGMSFF
>Mature_180_residues
MFHKELERRDFIGTLGALLGLATLPASALAASQQASIPASQVALVAAVADTMIPRTDTPGAVDVGVPKLLSALLANWAAP
ATRTALLGQFDAIDVAARGAKGKPFAALKPADRLAVLKAYDAASFTQADYKRLRGLILILYYNSEPGATVELRYEHAPGA
YEPSLPITPQTRAWAGMSFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19023; Mature: 19023

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHKELERRDFIGTLGALLGLATLPASALAASQQASIPASQVALVAAVADTMIPRTDTPG
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
AVDVGVPKLLSALLANWAAPATRTALLGQFDAIDVAARGAKGKPFAALKPADRLAVLKAY
CCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHCCCCCCCCEEECCCHHHHHHHHH
DAASFTQADYKRLRGLILILYYNSEPGATVELRYEHAPGAYEPSLPITPQTRAWAGMSFF
CCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFHKELERRDFIGTLGALLGLATLPASALAASQQASIPASQVALVAAVADTMIPRTDTPG
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
AVDVGVPKLLSALLANWAAPATRTALLGQFDAIDVAARGAKGKPFAALKPADRLAVLKAY
CCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHCCCCCCCCEEECCCHHHHHHHHH
DAASFTQADYKRLRGLILILYYNSEPGATVELRYEHAPGAYEPSLPITPQTRAWAGMSFF
CCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA