| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201177
Identifier: 87201177
GI number: 87201177
Start: 3379785
End: 3380327
Strand: Reverse
Name: 87201177
Synonym: Saro_3165
Alternate gene names: NA
Gene position: 3380327-3379785 (Counterclockwise)
Preceding gene: 87201180
Following gene: 87201176
Centisome position: 94.91
GC content: 66.85
Gene sequence:
>543_bases ATGTTTCATAAAGAGCTGGAAAGACGGGATTTTATTGGAACTCTTGGGGCGCTTCTCGGCCTCGCGACGCTCCCCGCCAG CGCTCTTGCGGCGAGTCAGCAGGCGTCGATCCCGGCTTCGCAGGTGGCGCTCGTCGCTGCGGTGGCGGACACGATGATTC CCAGGACCGACACTCCCGGCGCGGTCGATGTCGGGGTGCCGAAGCTGCTGTCGGCCCTGCTCGCCAACTGGGCCGCGCCG GCCACCCGCACCGCGCTCCTCGGGCAGTTCGATGCCATCGACGTGGCTGCGCGCGGGGCCAAGGGCAAGCCCTTTGCGGC GCTGAAGCCGGCTGATCGGCTTGCCGTGCTGAAGGCCTATGACGCGGCCAGTTTCACCCAGGCGGACTACAAGCGCCTGC GCGGCCTGATCCTGATCCTCTATTACAACTCCGAACCGGGTGCGACCGTGGAACTGCGCTACGAACACGCGCCTGGCGCC TACGAGCCCTCCCTGCCGATCACGCCGCAGACCCGCGCGTGGGCTGGCATGTCGTTCTTCTGA
Upstream 100 bases:
>100_bases AGCGTTGACAATTTGAGCCCCTCGATCCCATACCTTTTGCCGAAGATAGTCGCTGCAAGCGCGCAAAGACGCAACAGCGA ACTGTTCGGGAGACGGGCAA
Downstream 100 bases:
>100_bases AGCGGGCGAGGGAGCAACGGAAATGTTCGACGCAATCGTAATCGGATCGGGAATGAGCGGCGGCATCGCCGCCAAGGAAC TGTGCGAACGCGGCCTCAAG
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MFHKELERRDFIGTLGALLGLATLPASALAASQQASIPASQVALVAAVADTMIPRTDTPGAVDVGVPKLLSALLANWAAP ATRTALLGQFDAIDVAARGAKGKPFAALKPADRLAVLKAYDAASFTQADYKRLRGLILILYYNSEPGATVELRYEHAPGA YEPSLPITPQTRAWAGMSFF
Sequences:
>Translated_180_residues MFHKELERRDFIGTLGALLGLATLPASALAASQQASIPASQVALVAAVADTMIPRTDTPGAVDVGVPKLLSALLANWAAP ATRTALLGQFDAIDVAARGAKGKPFAALKPADRLAVLKAYDAASFTQADYKRLRGLILILYYNSEPGATVELRYEHAPGA YEPSLPITPQTRAWAGMSFF >Mature_180_residues MFHKELERRDFIGTLGALLGLATLPASALAASQQASIPASQVALVAAVADTMIPRTDTPGAVDVGVPKLLSALLANWAAP ATRTALLGQFDAIDVAARGAKGKPFAALKPADRLAVLKAYDAASFTQADYKRLRGLILILYYNSEPGATVELRYEHAPGA YEPSLPITPQTRAWAGMSFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19023; Mature: 19023
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHKELERRDFIGTLGALLGLATLPASALAASQQASIPASQVALVAAVADTMIPRTDTPG CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC AVDVGVPKLLSALLANWAAPATRTALLGQFDAIDVAARGAKGKPFAALKPADRLAVLKAY CCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHCCCCCCCCEEECCCHHHHHHHHH DAASFTQADYKRLRGLILILYYNSEPGATVELRYEHAPGAYEPSLPITPQTRAWAGMSFF CCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFHKELERRDFIGTLGALLGLATLPASALAASQQASIPASQVALVAAVADTMIPRTDTPG CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC AVDVGVPKLLSALLANWAAPATRTALLGQFDAIDVAARGAKGKPFAALKPADRLAVLKAY CCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHCCCCCCCCEEECCCHHHHHHHHH DAASFTQADYKRLRGLILILYYNSEPGATVELRYEHAPGAYEPSLPITPQTRAWAGMSFF CCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA