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The map label for this gene is 87201176

Identifier: 87201176

GI number: 87201176

Start: 3378071

End: 3379762

Strand: Reverse

Name: 87201176

Synonym: Saro_3164

Alternate gene names: NA

Gene position: 3379762-3378071 (Counterclockwise)

Preceding gene: 87201177

Following gene: 87201175

Centisome position: 94.89

GC content: 65.25

Gene sequence:

>1692_bases
ATGTTCGACGCAATCGTAATCGGATCGGGAATGAGCGGCGGCATCGCCGCCAAGGAACTGTGCGAACGCGGCCTCAAGAC
GCTCGTGATCGAGCGTGGCCGCAAGCTCGAGCACGGCGCGTCCTATACTGACTGGATGAACCCCTGGGACGTCCCCAACG
CTGGCCTCATTCCCGAAGAGGAACTGGCCCGCGACTATGCCGTCCAGCGCAACTGCTATGCCGTGAACACCGCTACGCAG
CAGTATTGGGTCAAGGATAGCGAGCATCCCTACACCACGCCGGAAGACAAGCCCTTCTGGTGGATTCGCGGCTATCACCT
GGGCGGCCGTTCGATCATGTGGGGTCGCCAGACCTATCGCATGTCGGAAATGGACTTCGAGGCCAATGCGCGCGACGGGC
ACGGCTCGGACTGGCCGATCCGCTATGCCGATCTCGCGCCGTGGTACGATCATATCGAGCGGTTCATCGGCGTTTCCGGA
TCGAAGGAGGGATTGCCGCAGCTTCCGGACGGCGAATTCCTGCCCGCCATGCCGATGAACGACGGCGAAAAGGCGTTCAA
GTCGGCGGTGGAGCGCAACTATCCCGATCGCAAGGTCATCATCGGCCGCTGTGCGCACCTGACCGAAGCGCGCGAGCATC
ACACGGAACTGGGGCGCAACCCCTGCCAGTACCGCTCGCTCTGCGAACGAGGTTGTTCCTACGGGGCTTATCACTCCAGC
CTGTCTTCGTCGCTCCCCGCGGCGGAAGCGACCGGCAACCTTACCATCGTGACCGACGCCATCGCCCATTCGATCATCAC
CGATCCCCGGACGGGCAAGGCCACCGGCGTGCGGGTGATCGACCAGAACACCCGCGAAGGCCGGACCTATGAGGCCAAGG
TTGTGTTCCTGTGCGCCTCGACCATTCCCACCGCGCAGATCCTGCTCAATTCGCGCAGCGAGGCGAACCCGCGCGGCCTT
GCCAATTCGTCGGACATGGTCGGACGCAACCTGATGGATCACCTCTACGGCCTCGGGTACGCGGCGCGCATGCCGGGGCC
GGAGACGACCTTTCGCGGGCGGCGCCCCAACGGTCTCTACATCCCGCGCTATCGCAACCTGCCAGGCGCCGGCGACACTG
CCGGCTTCCTGCGGGGCTACGGCTTCCAGGGTGCGGTTGACCGTAGTCCGTGGCGGGCGGTTGCGAATGCCGCGCCGGGC
GTCGGTGCGGAACTCAAGGAGCGGGTCCGCCACCCCGGCGAATGGATGACCTACTTCTCCGGCTTCGGCGAAATGCTGCC
GAACCCGGAGAACCGGGTGACGCTCCATGCGACCAATGTCGACAAGTGGGGCATGCCCATCGCCCATATCGACTGCGCGC
ACGGCGAGAACGACCGCAAGATGGCGCAGGCGATCCTTGCCGACGGCAAGGCGATGATCGAGGCGGCGGGCGGCCAGATC
GTCATGGCCCGCACGGACCTCGTGCCGCCCGGCCTCGGCATCCACGAAATGGGCACCGCCTGCATGGGCAAGGACCCGAA
GACCTCGGTGCTCAACAAGTACAACCAGGCCCATGACGTGCCGAACCTGTTCGTCACAGACGGCGCGGCAATGGCGTCGG
GCGGCTGCCAGAACCCGTCGCTGACCTACATGGCGCTTTCCGCCCGCGCGGCGCACCATGCCACGGAGTTCCTCAAGGCC
GGGACGATCTGA

Upstream 100 bases:

>100_bases
CACGCGCCTGGCGCCTACGAGCCCTCCCTGCCGATCACGCCGCAGACCCGCGCGTGGGCTGGCATGTCGTTCTTCTGAAG
CGGGCGAGGGAGCAACGGAA

Downstream 100 bases:

>100_bases
AGGATCGCCACGTCGTCACTGGCAGGTGCGATGCATCAAGCGCCGGGGAGCCTCAGCGCTTTCCCGGCCTTTGTGCATGC
GCGGATGATGGCGGAGCGGA

Product: glucose-methanol-choline oxidoreductase

Products: NA

Alternate protein names: Oxidoreductase; Gluconate 2-Dehydrogenase; Choline Dehydrogenase; FAD Dependent Oxidoreductase; GMC Family Oxidoreductase; GMC Oxidoreductase Family Protein; 2-Keto-Gluconate Dehydrogenase; Dehydrogenase; Oxidoreductase Protein; Gluconate 2-Dehydrogenase Flavoprotein; GMC Oxidoreductase Family; Dehydrogenase Large Subunit Protein; Glucose Dehydrogenase; Oxidoreductase GMC Family; Glucoside 3-Dehydrogenase; GMC Oxidoreductase; Glucose-Methanol-Choline Family Oxidoreductase; Gluconate Dehydrogenase; Gluconate Dehydrogenase Subunit; Oxidoreductase-Like Protein; Gluconate 2-Dehydrogenase Alpha Chain; Fad Dependent Oxidoreductase; Dehydrogenase Subunit; Dehydrogenase-Like Protein; Choline Dehydrogenase And Flavoproteins-Like Protein; Dehydrogluconate Dehydrogenase; Dehydrogenase Oxidoreductase Protein; Dehydrogenase Flavoprotein Subunit; Glucase Dehydrogenase Subunit Alpha; Transmembrane Dehydrogenase Protein; Dehydrogenase Subunit I; Choline Dehydrogenase-Like Flavoprotein; Solbitol Dehydrogenase Large Subunit; Flavoproteins Oxidoreductases; Glucose Dehydrogenase Alpha Subunit; Oxidoreductase Chain; Oxidoreductase GMC Family Protein; Glucose Dehydrogenase Subunit Alpha

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MFDAIVIGSGMSGGIAAKELCERGLKTLVIERGRKLEHGASYTDWMNPWDVPNAGLIPEEELARDYAVQRNCYAVNTATQ
QYWVKDSEHPYTTPEDKPFWWIRGYHLGGRSIMWGRQTYRMSEMDFEANARDGHGSDWPIRYADLAPWYDHIERFIGVSG
SKEGLPQLPDGEFLPAMPMNDGEKAFKSAVERNYPDRKVIIGRCAHLTEAREHHTELGRNPCQYRSLCERGCSYGAYHSS
LSSSLPAAEATGNLTIVTDAIAHSIITDPRTGKATGVRVIDQNTREGRTYEAKVVFLCASTIPTAQILLNSRSEANPRGL
ANSSDMVGRNLMDHLYGLGYAARMPGPETTFRGRRPNGLYIPRYRNLPGAGDTAGFLRGYGFQGAVDRSPWRAVANAAPG
VGAELKERVRHPGEWMTYFSGFGEMLPNPENRVTLHATNVDKWGMPIAHIDCAHGENDRKMAQAILADGKAMIEAAGGQI
VMARTDLVPPGLGIHEMGTACMGKDPKTSVLNKYNQAHDVPNLFVTDGAAMASGGCQNPSLTYMALSARAAHHATEFLKA
GTI

Sequences:

>Translated_563_residues
MFDAIVIGSGMSGGIAAKELCERGLKTLVIERGRKLEHGASYTDWMNPWDVPNAGLIPEEELARDYAVQRNCYAVNTATQ
QYWVKDSEHPYTTPEDKPFWWIRGYHLGGRSIMWGRQTYRMSEMDFEANARDGHGSDWPIRYADLAPWYDHIERFIGVSG
SKEGLPQLPDGEFLPAMPMNDGEKAFKSAVERNYPDRKVIIGRCAHLTEAREHHTELGRNPCQYRSLCERGCSYGAYHSS
LSSSLPAAEATGNLTIVTDAIAHSIITDPRTGKATGVRVIDQNTREGRTYEAKVVFLCASTIPTAQILLNSRSEANPRGL
ANSSDMVGRNLMDHLYGLGYAARMPGPETTFRGRRPNGLYIPRYRNLPGAGDTAGFLRGYGFQGAVDRSPWRAVANAAPG
VGAELKERVRHPGEWMTYFSGFGEMLPNPENRVTLHATNVDKWGMPIAHIDCAHGENDRKMAQAILADGKAMIEAAGGQI
VMARTDLVPPGLGIHEMGTACMGKDPKTSVLNKYNQAHDVPNLFVTDGAAMASGGCQNPSLTYMALSARAAHHATEFLKA
GTI
>Mature_563_residues
MFDAIVIGSGMSGGIAAKELCERGLKTLVIERGRKLEHGASYTDWMNPWDVPNAGLIPEEELARDYAVQRNCYAVNTATQ
QYWVKDSEHPYTTPEDKPFWWIRGYHLGGRSIMWGRQTYRMSEMDFEANARDGHGSDWPIRYADLAPWYDHIERFIGVSG
SKEGLPQLPDGEFLPAMPMNDGEKAFKSAVERNYPDRKVIIGRCAHLTEAREHHTELGRNPCQYRSLCERGCSYGAYHSS
LSSSLPAAEATGNLTIVTDAIAHSIITDPRTGKATGVRVIDQNTREGRTYEAKVVFLCASTIPTAQILLNSRSEANPRGL
ANSSDMVGRNLMDHLYGLGYAARMPGPETTFRGRRPNGLYIPRYRNLPGAGDTAGFLRGYGFQGAVDRSPWRAVANAAPG
VGAELKERVRHPGEWMTYFSGFGEMLPNPENRVTLHATNVDKWGMPIAHIDCAHGENDRKMAQAILADGKAMIEAAGGQI
VMARTDLVPPGLGIHEMGTACMGKDPKTSVLNKYNQAHDVPNLFVTDGAAMASGGCQNPSLTYMALSARAAHHATEFLKA
GTI

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61834; Mature: 61834

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDAIVIGSGMSGGIAAKELCERGLKTLVIERGRKLEHGASYTDWMNPWDVPNAGLIPEE
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ELARDYAVQRNCYAVNTATQQYWVKDSEHPYTTPEDKPFWWIRGYHLGGRSIMWGRQTYR
HHHHHHHHHCCCEEEECCCHHHEECCCCCCCCCCCCCCEEEEEEEEECCCEEEECCHHHH
MSEMDFEANARDGHGSDWPIRYADLAPWYDHIERFIGVSGSKEGLPQLPDGEFLPAMPMN
HCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
DGEKAFKSAVERNYPDRKVIIGRCAHLTEAREHHTELGRNPCQYRSLCERGCSYGAYHSS
CHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHH
LSSSLPAAEATGNLTIVTDAIAHSIITDPRTGKATGVRVIDQNTREGRTYEAKVVFLCAS
HHHCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEC
TIPTAQILLNSRSEANPRGLANSSDMVGRNLMDHLYGLGYAARMPGPETTFRGRRPNGLY
CCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEE
IPRYRNLPGAGDTAGFLRGYGFQGAVDRSPWRAVANAAPGVGAELKERVRHPGEWMTYFS
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH
GFGEMLPNPENRVTLHATNVDKWGMPIAHIDCAHGENDRKMAQAILADGKAMIEAAGGQI
HHHHHCCCCCCEEEEEECCCHHHCCCEEEEECCCCCCHHHHHHHHHHCCHHEEEECCCEE
VMARTDLVPPGLGIHEMGTACMGKDPKTSVLNKYNQAHDVPNLFVTDGAAMASGGCQNPS
EEEECCCCCCCCCHHHHCHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCCC
LTYMALSARAAHHATEFLKAGTI
EEEEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDAIVIGSGMSGGIAAKELCERGLKTLVIERGRKLEHGASYTDWMNPWDVPNAGLIPEE
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ELARDYAVQRNCYAVNTATQQYWVKDSEHPYTTPEDKPFWWIRGYHLGGRSIMWGRQTYR
HHHHHHHHHCCCEEEECCCHHHEECCCCCCCCCCCCCCEEEEEEEEECCCEEEECCHHHH
MSEMDFEANARDGHGSDWPIRYADLAPWYDHIERFIGVSGSKEGLPQLPDGEFLPAMPMN
HCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
DGEKAFKSAVERNYPDRKVIIGRCAHLTEAREHHTELGRNPCQYRSLCERGCSYGAYHSS
CHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHH
LSSSLPAAEATGNLTIVTDAIAHSIITDPRTGKATGVRVIDQNTREGRTYEAKVVFLCAS
HHHCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEC
TIPTAQILLNSRSEANPRGLANSSDMVGRNLMDHLYGLGYAARMPGPETTFRGRRPNGLY
CCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEE
IPRYRNLPGAGDTAGFLRGYGFQGAVDRSPWRAVANAAPGVGAELKERVRHPGEWMTYFS
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH
GFGEMLPNPENRVTLHATNVDKWGMPIAHIDCAHGENDRKMAQAILADGKAMIEAAGGQI
HHHHHCCCCCCEEEEEECCCHHHCCCEEEEECCCCCCHHHHHHHHHHCCHHEEEECCCEE
VMARTDLVPPGLGIHEMGTACMGKDPKTSVLNKYNQAHDVPNLFVTDGAAMASGGCQNPS
EEEECCCCCCCCCHHHHCHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCCC
LTYMALSARAAHHATEFLKAGTI
EEEEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA