| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is cyp108 [H]
Identifier: 87201174
GI number: 87201174
Start: 3375020
End: 3376312
Strand: Direct
Name: cyp108 [H]
Synonym: Saro_3162
Alternate gene names: 87201174
Gene position: 3375020-3376312 (Clockwise)
Preceding gene: 87201173
Following gene: 87201178
Centisome position: 94.76
GC content: 67.05
Gene sequence:
>1293_bases ATGGACAGCATTCCGATGGTGCCGGCCGAAGTCGGCCGCGCGGTGATAGACCCGAAGTCCTACGGGACGTGGGAGCCCTT GCTCGACCGGTTCGACGCGCTGCGCGCCGAGGCGCCAGTGGCAAAGGTCGTGGCCCCCGACGACGAGCACGAGCCTTTCT GGCTGGTCTCCAGCTTCGACGGGGTGATGAAGGCGAGCAAGGACAATGCCACCTTCCTCAACAATCCCAAGTCGACCGTG TTCACGCTGCGCGTGGGCGAGATGATGGCCAAGGCGATCACCGGCGGCAGTCCGCACCTTGTCGAATCGCTGGTGCAGAT GGATGCCCCCAAGCATCCCAAGCTGCGCCGCCTGACGCAGGACTGGTTCATGCCCAAGAACCTGGCGCGGCTGGACGGCG AGATCCGCAAAATCGCCAACGAAGCCATCGACCGCATGCTCGGCGCGGGCGAAGAGGGTGATTTCATGGCGCTGGTCGCC GCGCCCTATCCGCTCCACGTGGTGATGCAGATCCTTGGCGTGCCGCCCGAGGACGAGCCGAAGATGCTGTTCCTGACCCA GCAGATGTTCGGCGGGCAGGACGAGGACATGAACAAGTCCGGGCTCAAGGACCTGCCGCCCGAGCAGATCTCGCAGATCG TGGCCGGCGCGGTGGCCGAATTCGAACGCTACTTCGCGGGACTGGCGGCCGAGCGGCGCCGCAACCCGACCGATGACGTC GCTACCGTGATCGCCAATGCCGTGGTCGATGGCGAACCGATGAGCGACCGCGACACGGCGGGCTATTACATCATCACCGC AAGCGCCGGGCACGACACGACCTCGGCATCGTCGGCCGGGGCGGCGCTGGCCCTTGCGCGCGATCCCGACCTGTTCGCGC GGGTGAAGGCCGACCGCAACCTGCTTCCCGGCATTGTCGAGGAGGCGATCCGGTGGACGACGCCGGTCCAGCACTTCATG CGCACCGCCGCGACCGACACCGAGCTTTGCGGGCAGAAGATCGCGGCGGGCGACTGGCTGATGCTCAACTACGTCGCGGC GAACCACGATCCGGCGCAGTTCCCCGAACCGCGCAAGTTCGACCCGACGCGCCCGGCCAACCGCCATCTGGCGTTCGGCG CGGGATCGCACCAGTGCCTTGGCCTGCACCTGGCCCGGCTGGAGATGCGCGTGTTGCTGGACGTGCTGCTGGACCGGGTG GACAGCCTCGAGCTTGCGGGCGAACCGAAGCGGGTGAACTCCACCTTCGTCGGCGGGTTCAAGTCGTTGCCGATGCGGTG GAAGGCGGCCTGA
Upstream 100 bases:
>100_bases CCGACCGGCAAGCTGTTCAAGCGCCTGCTGCGTGACGAATACAAGCAGGCTTACGAAGCGGCGCAGGCCGCGGCGGTCTG ACGGCAAGCGGGAGGGTTTT
Downstream 100 bases:
>100_bases CCGGCAGGTGGCCCCTCCCGCCGGCGGGAGGGGCCACCACGCTCCGGCCCTCCGGCCTTCAGCCTTCCATGGCCTCGAGT TCCTTGCCCTTGGTCTCCTT
Product: cytochrome P450
Products: NA
Alternate protein names: Cytochrome P450terp; Cytochrome P450 108 [H]
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MDSIPMVPAEVGRAVIDPKSYGTWEPLLDRFDALRAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDNATFLNNPKSTV FTLRVGEMMAKAITGGSPHLVESLVQMDAPKHPKLRRLTQDWFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVA APYPLHVVMQILGVPPEDEPKMLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNPTDDV ATVIANAVVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRNLLPGIVEEAIRWTTPVQHFM RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRV DSLELAGEPKRVNSTFVGGFKSLPMRWKAA
Sequences:
>Translated_430_residues MDSIPMVPAEVGRAVIDPKSYGTWEPLLDRFDALRAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDNATFLNNPKSTV FTLRVGEMMAKAITGGSPHLVESLVQMDAPKHPKLRRLTQDWFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVA APYPLHVVMQILGVPPEDEPKMLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNPTDDV ATVIANAVVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRNLLPGIVEEAIRWTTPVQHFM RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRV DSLELAGEPKRVNSTFVGGFKSLPMRWKAA >Mature_430_residues MDSIPMVPAEVGRAVIDPKSYGTWEPLLDRFDALRAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDNATFLNNPKSTV FTLRVGEMMAKAITGGSPHLVESLVQMDAPKHPKLRRLTQDWFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVA APYPLHVVMQILGVPPEDEPKMLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNPTDDV ATVIANAVVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRNLLPGIVEEAIRWTTPVQHFM RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRV DSLELAGEPKRVNSTFVGGFKSLPMRWKAA
Specific function: Catalyzes the hydroxylation of alpha-terpineol [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI195972896, Length=175, Percent_Identity=29.1428571428571, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI195972898, Length=175, Percent_Identity=29.1428571428571, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI261278370, Length=175, Percent_Identity=29.1428571428571, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI261278372, Length=175, Percent_Identity=29.1428571428571, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI17933518, Length=196, Percent_Identity=26.0204081632653, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI21355669, Length=195, Percent_Identity=27.1794871794872, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 47121; Mature: 47121
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSIPMVPAEVGRAVIDPKSYGTWEPLLDRFDALRAEAPVAKVVAPDDEHEPFWLVSSFD CCCCCCCHHHHCCEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCC GVMKASKDNATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESLVQMDAPKHPKLRRLTQ HHHHCCCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHH DWFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVAAPYPLHVVMQILGVPPEDEP HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCC KMLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNPTDDV CEEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ATVIANAVVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCC LLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKF CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCC DPTRPANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAGEPKRVNSTFVGGF CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHCCH KSLPMRWKAA HCCCCEECCC >Mature Secondary Structure MDSIPMVPAEVGRAVIDPKSYGTWEPLLDRFDALRAEAPVAKVVAPDDEHEPFWLVSSFD CCCCCCCHHHHCCEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCC GVMKASKDNATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESLVQMDAPKHPKLRRLTQ HHHHCCCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHH DWFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVAAPYPLHVVMQILGVPPEDEP HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCC KMLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNPTDDV CEEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ATVIANAVVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCC LLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKF CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCC DPTRPANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAGEPKRVNSTFVGGF CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHCCH KSLPMRWKAA HCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1629218; 8120894 [H]