Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is yegT [H]

Identifier: 87201178

GI number: 87201178

Start: 3380417

End: 3381637

Strand: Direct

Name: yegT [H]

Synonym: Saro_3166

Alternate gene names: 87201178

Gene position: 3380417-3381637 (Clockwise)

Preceding gene: 87201174

Following gene: 87201179

Centisome position: 94.91

GC content: 65.03

Gene sequence:

>1221_bases
TTGTCAACGCTGTCACTCAAAATTCGCCTGTTCGCCATGATGGCACTGCAACTCGCCGTGTGGGGGGCCTGGGCGCCCAA
GCTGTTTCCCTACATGGCCATGCTGGGCTTCAGCGCCGGGCAGCAAGGGCTGGTCGGAACGTGCTGGGGCATCGCCTCGG
TAGTGGGGATTTTCTTCTCCAACCAGTTCGCCGATCGCACGTTTGCGGCCGAGCGATTCCTTGCCGGCAGCCACCTCATC
GGCGGCCTCGCCCTCCTCGGCGTCGCCTTCAGCCAGACCTTCGCGCCGTTCTTCCTGTGTTACCTGATCTACAGCCTGGT
CTACGTGCCGACACTGTCGGTGACCAATACCGTCGCCTTCACCCACCTGCCCAATCCGGCCGAATTCGGCTCGGTCCGCT
CGGGCGGCACGGTAGGCTGGATCATGGCGAGCTGGCCCTTCGTCTTCCTGCTGGGCGCCCATGCCGATGCCAGCCAGGTG
CGCTCGATCTTCATCGTCGCGGCGGTCATCTCGTTCGTCATGGCCGCCTTCTCGCTGACCCTGCCGCACACCCCGCCCAA
GACCGGCGAGGGCATCGACAAGCTCGCCTGGCGACGCGCGCTGGGCCTGCTTCGGAAGCCGGTCGTGGCGGTGCTGTTCC
TCGTGACGTTCATCGATTCGGTCGTCCACAATGGCTACTTCGTGCTGTCCGACGCCTTCCTGACGAACCGCGTGGGCATT
GCCGGCAACCTATCGATGGTGGTGCTGAGCCTTGGGCAGGTAGCCGAGATCCTCACCATGCTCGTGCTCGGAACCGTGCT
GGCCCGGCTCGGGTGGCGCTGGACGATGATCGTCGGCATCCTCGGACATGCCGCGCGCTTCCTCGCCTTCTCGTTCCTTG
CCGACAGCGTTCCCGCGATCATCGCGGTCCAGTTGCTCCACGGCATCTGCTACGCCTTCTTCTTCGCGACGGTCTATATC
TTCGTTGACGAGGCCTTTCCCAAGGACGTGCGCTCTTCGGGCCAGGGGCTGTTCAACCTGCTGATCCTGGGCCTGGGCAA
CATGGTGGCCAGCTTTGCCTTCCCGGCCCTCGTCTCCCGTCTCACCGGGGCCGACGGCAAGGTCGATTACCAGGCCGTTT
TCCTTGTCCCCGCAGGGCTTGCGGCCCTCGGCGCGGTGCTGCTGCTGGTCGCCTTCCGCCCCCAAACGCATGGCCCCGCG
AGGCCCGAGGAGATTGCCTGA

Upstream 100 bases:

>100_bases
TTATGAAACATTTGCCCGTCTCCCGAACAGTTCGCTGTTGCGTCTTTGCGCGCTTGCAGCGACTATCTTCGGCAAAAGGT
ATGGGATCGAGGGGCTCAAA

Downstream 100 bases:

>100_bases
TGCACGACGCAAAGCTTGATCGCCGCTCGCTGATCGCGGCGCTGGCCGCCACCGGAGTTGCCGCCATGACCGGAACCGAC
GCCATCGCGCGCGCTGCCGC

Product: nucleoside:H+ symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSTLSLKIRLFAMMALQLAVWGAWAPKLFPYMAMLGFSAGQQGLVGTCWGIASVVGIFFSNQFADRTFAAERFLAGSHLI
GGLALLGVAFSQTFAPFFLCYLIYSLVYVPTLSVTNTVAFTHLPNPAEFGSVRSGGTVGWIMASWPFVFLLGAHADASQV
RSIFIVAAVISFVMAAFSLTLPHTPPKTGEGIDKLAWRRALGLLRKPVVAVLFLVTFIDSVVHNGYFVLSDAFLTNRVGI
AGNLSMVVLSLGQVAEILTMLVLGTVLARLGWRWTMIVGILGHAARFLAFSFLADSVPAIIAVQLLHGICYAFFFATVYI
FVDEAFPKDVRSSGQGLFNLLILGLGNMVASFAFPALVSRLTGADGKVDYQAVFLVPAGLAALGAVLLLVAFRPQTHGPA
RPEEIA

Sequences:

>Translated_406_residues
MSTLSLKIRLFAMMALQLAVWGAWAPKLFPYMAMLGFSAGQQGLVGTCWGIASVVGIFFSNQFADRTFAAERFLAGSHLI
GGLALLGVAFSQTFAPFFLCYLIYSLVYVPTLSVTNTVAFTHLPNPAEFGSVRSGGTVGWIMASWPFVFLLGAHADASQV
RSIFIVAAVISFVMAAFSLTLPHTPPKTGEGIDKLAWRRALGLLRKPVVAVLFLVTFIDSVVHNGYFVLSDAFLTNRVGI
AGNLSMVVLSLGQVAEILTMLVLGTVLARLGWRWTMIVGILGHAARFLAFSFLADSVPAIIAVQLLHGICYAFFFATVYI
FVDEAFPKDVRSSGQGLFNLLILGLGNMVASFAFPALVSRLTGADGKVDYQAVFLVPAGLAALGAVLLLVAFRPQTHGPA
RPEEIA
>Mature_405_residues
STLSLKIRLFAMMALQLAVWGAWAPKLFPYMAMLGFSAGQQGLVGTCWGIASVVGIFFSNQFADRTFAAERFLAGSHLIG
GLALLGVAFSQTFAPFFLCYLIYSLVYVPTLSVTNTVAFTHLPNPAEFGSVRSGGTVGWIMASWPFVFLLGAHADASQVR
SIFIVAAVISFVMAAFSLTLPHTPPKTGEGIDKLAWRRALGLLRKPVVAVLFLVTFIDSVVHNGYFVLSDAFLTNRVGIA
GNLSMVVLSLGQVAEILTMLVLGTVLARLGWRWTMIVGILGHAARFLAFSFLADSVPAIIAVQLLHGICYAFFFATVYIF
VDEAFPKDVRSSGQGLFNLLILGLGNMVASFAFPALVSRLTGADGKVDYQAVFLVPAGLAALGAVLLLVAFRPQTHGPAR
PEEIA

Specific function: Could be involved in nucleoside transport [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788415, Length=408, Percent_Identity=31.1274509803922, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1788745, Length=422, Percent_Identity=26.0663507109005, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI87082192, Length=421, Percent_Identity=26.8408551068884, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR004740 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43524; Mature: 43393

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00139 THIOL_PROTEASE_CYS ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLSLKIRLFAMMALQLAVWGAWAPKLFPYMAMLGFSAGQQGLVGTCWGIASVVGIFFS
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
NQFADRTFAAERFLAGSHLIGGLALLGVAFSQTFAPFFLCYLIYSLVYVPTLSVTNTVAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEE
THLPNPAEFGSVRSGGTVGWIMASWPFVFLLGAHADASQVRSIFIVAAVISFVMAAFSLT
EECCCCHHCCCCCCCCCEEEHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
LPHTPPKTGEGIDKLAWRRALGLLRKPVVAVLFLVTFIDSVVHNGYFVLSDAFLTNRVGI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHCCCC
AGNLSMVVLSLGQVAEILTMLVLGTVLARLGWRWTMIVGILGHAARFLAFSFLADSVPAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVQLLHGICYAFFFATVYIFVDEAFPKDVRSSGQGLFNLLILGLGNMVASFAFPALVSR
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGADGKVDYQAVFLVPAGLAALGAVLLLVAFRPQTHGPARPEEIA
HCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
STLSLKIRLFAMMALQLAVWGAWAPKLFPYMAMLGFSAGQQGLVGTCWGIASVVGIFFS
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
NQFADRTFAAERFLAGSHLIGGLALLGVAFSQTFAPFFLCYLIYSLVYVPTLSVTNTVAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEE
THLPNPAEFGSVRSGGTVGWIMASWPFVFLLGAHADASQVRSIFIVAAVISFVMAAFSLT
EECCCCHHCCCCCCCCCEEEHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
LPHTPPKTGEGIDKLAWRRALGLLRKPVVAVLFLVTFIDSVVHNGYFVLSDAFLTNRVGI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHCCCC
AGNLSMVVLSLGQVAEILTMLVLGTVLARLGWRWTMIVGILGHAARFLAFSFLADSVPAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVQLLHGICYAFFFATVYIFVDEAFPKDVRSSGQGLFNLLILGLGNMVASFAFPALVSR
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGADGKVDYQAVFLVPAGLAALGAVLLLVAFRPQTHGPARPEEIA
HCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]