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The map label for this gene is oppA [C]

Identifier: 87201111

GI number: 87201111

Start: 3317633

End: 3319111

Strand: Reverse

Name: oppA [C]

Synonym: Saro_3099

Alternate gene names: 87201111

Gene position: 3319111-3317633 (Counterclockwise)

Preceding gene: 87201112

Following gene: 87201110

Centisome position: 93.19

GC content: 68.9

Gene sequence:

>1479_bases
ATGGCTGCACACCGCCTTGCAAGAACGGGCCCGTTTTTCCTGCTTTCGCTGGCGCTCGTTTCGTGCGGGAAGGGGCATGA
CGGTGCCCTGGAAGTCGCCGTCATGGGCGATGCATCGGCAATCGCGGAGAAGCGGGCAAGGCTGACGCCGGCGGCGCAGC
TCATCCGTAGCGCCACCGTCGAGGGGCTTGTCGGCTTCGATGAGCAGGGCCGTGTCGTCCCCGCGCTGGCCGACCGCTGG
ATCGTCACCGACAATGGGCAGAGCTATATCTTCCGCCTGCGCGACGGCACCTGGCCGGACGGCAAGCGGATCGCCGCCGA
CACGGCCGCGACCGCGCTGCGGCGATCCATTGCCAGTCTCAAGGGAACGGCGCTTGGCCTCGACCTTGCGGCCATCGACG
AAGTGCGGGTCATGGCCGACCGGGTGATAGAGATCGACCTCGCCGCGCCCGTGCCGGAATTGCTCACGCTTCTGGCGCAG
CCCGAGCTGGGCCTGTTCTATTCCGGCAAGGGCATCGGTCCGATGGCGCTGGAGCCGGGCGCGGAGGGCGCGGCATCGCT
GAAGCTCATCCCGCCCGAGCAGCGCGGCATGACCCGGCAGCCCGATTTCCCGCATCGCGCGCGTACGCTTTCTCTGAAGT
TCACCGCGCCGGCAAAGGCGGTCGCGCTGTTCAACGACGGCTATGCGGACGTCGTGCTTGGCGGACGGGTCGACACCATA
CCGCTCGCCGGAAGGATCGGGCTGACTCGCGGCAACGTCCAACTCGACCCGGTGATCGGCCTGTTCGGGTTGATGATCGA
ACGCACTGAAGGTTTCCTGGGCGATGCCGCCAACCGCGAGGCGCTGGCGATGGCAATCGACCGCGACGCGCTTCTCGCGC
GGTTCAACATCGGCGGCTGGCAACCGACGACTCGCATCGTCTCGCCGGATGTGGAGGATGATCTCGGCACCATCGGAGAG
CGCTGGCAGGGGATGAGCGCGGAGCAGCGGCAGGCGCAGGCCGCCGCGCGCGTGGCGGCCTGGAAAGGGGCGGGGCGCAA
CCTGCCAACGCTCAACATCGCCATGCCCGACGGACCGGGGTCGAGCTTCGTGTTCGAGCAGGTGCGCGACGATCTCGCAC
GGGTCGGCGTTGCCGTGCGCCGCGTGCCCGAGCGGGACCGGGCCGATTTGCGGCTGGTCGATGTGGCAGCGCGCTATGGC
CGGGCGACGTGGTTCCTCAACCAGCTGTCGTGCACGGTGCAGAAGGCGGTCTGCAGCCCGATCGGCGACGAGAGGGTGGC
CGAGGCGCGACGGGCGGCAGACCCGCAGGCGCGTGCTGCGCTGCTCGCCGAAGCGGAGGCCGAAATCACCGCTGCCAACG
GCTTCATTCCCATCGCCCGGCCCTTGCGCTGGTCGATGGTGCGCAGTGGCACGACCGGCTTTGGCCAAAGCCCGTGGGGC
TGGCATCCCTTGCCGCCGCTGGCATGGCTCCCCAAGTAG

Upstream 100 bases:

>100_bases
GTGAAGCCGGTCCTCGCCGGCAACAATGCTGCGGGTCCGCTTCGCAAGATCTGAAAAACTGGTCGCTGACCCGCGCCGGT
CCATCTGCTAGGCTTCGGCG

Downstream 100 bases:

>100_bases
GGGGCATGGACAAGACCTACGTCGCCGTACCCGTTTCCCCGACCCCGTCGTCCTCGGCCCGCCGGCCCGAACGGATGAGG
CCCGAGATCCCGGGCATCGG

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MAAHRLARTGPFFLLSLALVSCGKGHDGALEVAVMGDASAIAEKRARLTPAAQLIRSATVEGLVGFDEQGRVVPALADRW
IVTDNGQSYIFRLRDGTWPDGKRIAADTAATALRRSIASLKGTALGLDLAAIDEVRVMADRVIEIDLAAPVPELLTLLAQ
PELGLFYSGKGIGPMALEPGAEGAASLKLIPPEQRGMTRQPDFPHRARTLSLKFTAPAKAVALFNDGYADVVLGGRVDTI
PLAGRIGLTRGNVQLDPVIGLFGLMIERTEGFLGDAANREALAMAIDRDALLARFNIGGWQPTTRIVSPDVEDDLGTIGE
RWQGMSAEQRQAQAAARVAAWKGAGRNLPTLNIAMPDGPGSSFVFEQVRDDLARVGVAVRRVPERDRADLRLVDVAARYG
RATWFLNQLSCTVQKAVCSPIGDERVAEARRAADPQARAALLAEAEAEITAANGFIPIARPLRWSMVRSGTTGFGQSPWG
WHPLPPLAWLPK

Sequences:

>Translated_492_residues
MAAHRLARTGPFFLLSLALVSCGKGHDGALEVAVMGDASAIAEKRARLTPAAQLIRSATVEGLVGFDEQGRVVPALADRW
IVTDNGQSYIFRLRDGTWPDGKRIAADTAATALRRSIASLKGTALGLDLAAIDEVRVMADRVIEIDLAAPVPELLTLLAQ
PELGLFYSGKGIGPMALEPGAEGAASLKLIPPEQRGMTRQPDFPHRARTLSLKFTAPAKAVALFNDGYADVVLGGRVDTI
PLAGRIGLTRGNVQLDPVIGLFGLMIERTEGFLGDAANREALAMAIDRDALLARFNIGGWQPTTRIVSPDVEDDLGTIGE
RWQGMSAEQRQAQAAARVAAWKGAGRNLPTLNIAMPDGPGSSFVFEQVRDDLARVGVAVRRVPERDRADLRLVDVAARYG
RATWFLNQLSCTVQKAVCSPIGDERVAEARRAADPQARAALLAEAEAEITAANGFIPIARPLRWSMVRSGTTGFGQSPWG
WHPLPPLAWLPK
>Mature_491_residues
AAHRLARTGPFFLLSLALVSCGKGHDGALEVAVMGDASAIAEKRARLTPAAQLIRSATVEGLVGFDEQGRVVPALADRWI
VTDNGQSYIFRLRDGTWPDGKRIAADTAATALRRSIASLKGTALGLDLAAIDEVRVMADRVIEIDLAAPVPELLTLLAQP
ELGLFYSGKGIGPMALEPGAEGAASLKLIPPEQRGMTRQPDFPHRARTLSLKFTAPAKAVALFNDGYADVVLGGRVDTIP
LAGRIGLTRGNVQLDPVIGLFGLMIERTEGFLGDAANREALAMAIDRDALLARFNIGGWQPTTRIVSPDVEDDLGTIGER
WQGMSAEQRQAQAAARVAAWKGAGRNLPTLNIAMPDGPGSSFVFEQVRDDLARVGVAVRRVPERDRADLRLVDVAARYGR
ATWFLNQLSCTVQKAVCSPIGDERVAEARRAADPQARAALLAEAEAEITAANGFIPIARPLRWSMVRSGTTGFGQSPWGW
HPLPPLAWLPK

Specific function: This Protein Is A Component Of The Oligopeptide Permease, A Binding Protein-Dependent Transport System, It Binds Peptides Up To Five Amino Acids Long With High Affinity. [C]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789397, Length=146, Percent_Identity=30.8219178082192, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52684; Mature: 52553

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAHRLARTGPFFLLSLALVSCGKGHDGALEVAVMGDASAIAEKRARLTPAAQLIRSATV
CCCCHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHH
EGLVGFDEQGRVVPALADRWIVTDNGQSYIFRLRDGTWPDGKRIAADTAATALRRSIASL
HHHCCCCCCCCEEHHHCCCEEEEECCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHH
KGTALGLDLAAIDEVRVMADRVIEIDLAAPVPELLTLLAQPELGLFYSGKGIGPMALEPG
CCCCEECCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCCCCCCEEECCCCCCCCEECCC
AEGAASLKLIPPEQRGMTRQPDFPHRARTLSLKFTAPAKAVALFNDGYADVVLGGRVDTI
CCCCCEEEEECCHHCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCEEEEECCCCCEE
PLAGRIGLTRGNVQLDPVIGLFGLMIERTEGFLGDAANREALAMAIDRDALLARFNIGGW
ECCCEEEEEECCEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECCCC
QPTTRIVSPDVEDDLGTIGERWQGMSAEQRQAQAAARVAAWKGAGRNLPTLNIAMPDGPG
CCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
SSFVFEQVRDDLARVGVAVRRVPERDRADLRLVDVAARYGRATWFLNQLSCTVQKAVCSP
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCHHEEHHHHHHHHHHHHHCC
IGDERVAEARRAADPQARAALLAEAEAEITAANGFIPIARPLRWSMVRSGTTGFGQSPWG
CCHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCEECCCCHHHHHHHCCCCCCCCCCCC
WHPLPPLAWLPK
CCCCCCCCCCCC
>Mature Secondary Structure 
AAHRLARTGPFFLLSLALVSCGKGHDGALEVAVMGDASAIAEKRARLTPAAQLIRSATV
CCCHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHH
EGLVGFDEQGRVVPALADRWIVTDNGQSYIFRLRDGTWPDGKRIAADTAATALRRSIASL
HHHCCCCCCCCEEHHHCCCEEEEECCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHH
KGTALGLDLAAIDEVRVMADRVIEIDLAAPVPELLTLLAQPELGLFYSGKGIGPMALEPG
CCCCEECCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCCCCCCEEECCCCCCCCEECCC
AEGAASLKLIPPEQRGMTRQPDFPHRARTLSLKFTAPAKAVALFNDGYADVVLGGRVDTI
CCCCCEEEEECCHHCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCEEEEECCCCCEE
PLAGRIGLTRGNVQLDPVIGLFGLMIERTEGFLGDAANREALAMAIDRDALLARFNIGGW
ECCCEEEEEECCEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECCCC
QPTTRIVSPDVEDDLGTIGERWQGMSAEQRQAQAAARVAAWKGAGRNLPTLNIAMPDGPG
CCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
SSFVFEQVRDDLARVGVAVRRVPERDRADLRLVDVAARYGRATWFLNQLSCTVQKAVCSP
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCHHEEHHHHHHHHHHHHHCC
IGDERVAEARRAADPQARAALLAEAEAEITAANGFIPIARPLRWSMVRSGTTGFGQSPWG
CCHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCEECCCCHHHHHHHCCCCCCCCCCCC
WHPLPPLAWLPK
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA