| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201112
Identifier: 87201112
GI number: 87201112
Start: 3319158
End: 3319541
Strand: Reverse
Name: 87201112
Synonym: Saro_3100
Alternate gene names: NA
Gene position: 3319541-3319158 (Counterclockwise)
Preceding gene: 87201113
Following gene: 87201111
Centisome position: 93.2
GC content: 65.36
Gene sequence:
>384_bases ATGAAGGCGGCAGGACTTTCGGTGACTGACATCGACCAGCGGCAACTTGGGCGCGACAGCCTTTTTCTCCTGGCGGAGGC ACGCCTCGCCGGGGACGCGATCGAGCATCGCGTGAAGGTGCGCAATCTTTCCGCCGGCGGAATGATGGCCGAGGGTGCGA TGAAGGTGGTGCGCGGGACCCGTGTAGAGGTGAACCTGCGCAACATCGGATGGGTCGACGGCGTCGTCGCCTGGATCCAG GACAACCGCTTCGGCATCGCCTTCGTCGACCAGGTCGATCCCAAGCTGGCCCGCGAACCGGTCAAGATCGGCGCCGGCAC GCCGCGCTTCGTGAAGCCGGTCCTCGCCGGCAACAATGCTGCGGGTCCGCTTCGCAAGATCTGA
Upstream 100 bases:
>100_bases CTTGTTAGGGGTTTTTTTACCCTGCGCCTTCAGGATGCGTGGATAAATTTCTGCCTATGTGGCGTGTGCGGGTGCACGAT CGCGTATTGGGCATGAACCT
Downstream 100 bases:
>100_bases AAAACTGGTCGCTGACCCGCGCCGGTCCATCTGCTAGGCTTCGGCGATGGCTGCACACCGCCTTGCAAGAACGGGCCCGT TTTTCCTGCTTTCGCTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MKAAGLSVTDIDQRQLGRDSLFLLAEARLAGDAIEHRVKVRNLSAGGMMAEGAMKVVRGTRVEVNLRNIGWVDGVVAWIQ DNRFGIAFVDQVDPKLAREPVKIGAGTPRFVKPVLAGNNAAGPLRKI
Sequences:
>Translated_127_residues MKAAGLSVTDIDQRQLGRDSLFLLAEARLAGDAIEHRVKVRNLSAGGMMAEGAMKVVRGTRVEVNLRNIGWVDGVVAWIQ DNRFGIAFVDQVDPKLAREPVKIGAGTPRFVKPVLAGNNAAGPLRKI >Mature_127_residues MKAAGLSVTDIDQRQLGRDSLFLLAEARLAGDAIEHRVKVRNLSAGGMMAEGAMKVVRGTRVEVNLRNIGWVDGVVAWIQ DNRFGIAFVDQVDPKLAREPVKIGAGTPRFVKPVLAGNNAAGPLRKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13686; Mature: 13686
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAAGLSVTDIDQRQLGRDSLFLLAEARLAGDAIEHRVKVRNLSAGGMMAEGAMKVVRGT CCCCCCCEECCCHHHCCCCCEEEEEHHHHHHHHHHHEEEEEECCCCCEEHHHHHHHHCCC RVEVNLRNIGWVDGVVAWIQDNRFGIAFVDQVDPKLAREPVKIGAGTPRFVKPVLAGNNA EEEEEECCCCCHHHEEEEEECCCCEEEEECCCCHHHHCCCEECCCCCCHHHHHHHCCCCC AGPLRKI CCCCCCC >Mature Secondary Structure MKAAGLSVTDIDQRQLGRDSLFLLAEARLAGDAIEHRVKVRNLSAGGMMAEGAMKVVRGT CCCCCCCEECCCHHHCCCCCEEEEEHHHHHHHHHHHEEEEEECCCCCEEHHHHHHHHCCC RVEVNLRNIGWVDGVVAWIQDNRFGIAFVDQVDPKLAREPVKIGAGTPRFVKPVLAGNNA EEEEEECCCCCHHHEEEEEECCCCEEEEECCCCHHHHCCCEECCCCCCHHHHHHHCCCCC AGPLRKI CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA