Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201112

Identifier: 87201112

GI number: 87201112

Start: 3319158

End: 3319541

Strand: Reverse

Name: 87201112

Synonym: Saro_3100

Alternate gene names: NA

Gene position: 3319541-3319158 (Counterclockwise)

Preceding gene: 87201113

Following gene: 87201111

Centisome position: 93.2

GC content: 65.36

Gene sequence:

>384_bases
ATGAAGGCGGCAGGACTTTCGGTGACTGACATCGACCAGCGGCAACTTGGGCGCGACAGCCTTTTTCTCCTGGCGGAGGC
ACGCCTCGCCGGGGACGCGATCGAGCATCGCGTGAAGGTGCGCAATCTTTCCGCCGGCGGAATGATGGCCGAGGGTGCGA
TGAAGGTGGTGCGCGGGACCCGTGTAGAGGTGAACCTGCGCAACATCGGATGGGTCGACGGCGTCGTCGCCTGGATCCAG
GACAACCGCTTCGGCATCGCCTTCGTCGACCAGGTCGATCCCAAGCTGGCCCGCGAACCGGTCAAGATCGGCGCCGGCAC
GCCGCGCTTCGTGAAGCCGGTCCTCGCCGGCAACAATGCTGCGGGTCCGCTTCGCAAGATCTGA

Upstream 100 bases:

>100_bases
CTTGTTAGGGGTTTTTTTACCCTGCGCCTTCAGGATGCGTGGATAAATTTCTGCCTATGTGGCGTGTGCGGGTGCACGAT
CGCGTATTGGGCATGAACCT

Downstream 100 bases:

>100_bases
AAAACTGGTCGCTGACCCGCGCCGGTCCATCTGCTAGGCTTCGGCGATGGCTGCACACCGCCTTGCAAGAACGGGCCCGT
TTTTCCTGCTTTCGCTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKAAGLSVTDIDQRQLGRDSLFLLAEARLAGDAIEHRVKVRNLSAGGMMAEGAMKVVRGTRVEVNLRNIGWVDGVVAWIQ
DNRFGIAFVDQVDPKLAREPVKIGAGTPRFVKPVLAGNNAAGPLRKI

Sequences:

>Translated_127_residues
MKAAGLSVTDIDQRQLGRDSLFLLAEARLAGDAIEHRVKVRNLSAGGMMAEGAMKVVRGTRVEVNLRNIGWVDGVVAWIQ
DNRFGIAFVDQVDPKLAREPVKIGAGTPRFVKPVLAGNNAAGPLRKI
>Mature_127_residues
MKAAGLSVTDIDQRQLGRDSLFLLAEARLAGDAIEHRVKVRNLSAGGMMAEGAMKVVRGTRVEVNLRNIGWVDGVVAWIQ
DNRFGIAFVDQVDPKLAREPVKIGAGTPRFVKPVLAGNNAAGPLRKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13686; Mature: 13686

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAAGLSVTDIDQRQLGRDSLFLLAEARLAGDAIEHRVKVRNLSAGGMMAEGAMKVVRGT
CCCCCCCEECCCHHHCCCCCEEEEEHHHHHHHHHHHEEEEEECCCCCEEHHHHHHHHCCC
RVEVNLRNIGWVDGVVAWIQDNRFGIAFVDQVDPKLAREPVKIGAGTPRFVKPVLAGNNA
EEEEEECCCCCHHHEEEEEECCCCEEEEECCCCHHHHCCCEECCCCCCHHHHHHHCCCCC
AGPLRKI
CCCCCCC
>Mature Secondary Structure
MKAAGLSVTDIDQRQLGRDSLFLLAEARLAGDAIEHRVKVRNLSAGGMMAEGAMKVVRGT
CCCCCCCEECCCHHHCCCCCEEEEEHHHHHHHHHHHEEEEEECCCCCEEHHHHHHHHCCC
RVEVNLRNIGWVDGVVAWIQDNRFGIAFVDQVDPKLAREPVKIGAGTPRFVKPVLAGNNA
EEEEEECCCCCHHHEEEEEECCCCEEEEECCCCHHHHCCCEECCCCCCHHHHHHHCCCCC
AGPLRKI
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA