| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is tauD [H]
Identifier: 87201099
GI number: 87201099
Start: 3307181
End: 3308095
Strand: Direct
Name: tauD [H]
Synonym: Saro_3087
Alternate gene names: 87201099
Gene position: 3307181-3308095 (Clockwise)
Preceding gene: 87201097
Following gene: 87201100
Centisome position: 92.86
GC content: 61.42
Gene sequence:
>915_bases ATGGGCTTTGAGGTCCGCGCGCTGGATGGCAGTTTCGGCAGAGAGATTGTTGGCCTGGATATTTCAGCCGCGATTGCGCC TGACGTTGCCGTCGCGCTGAAGCAGGTGTGGTTGGATCACGGCGTACTGGTGTTTCGCGGCATCGGCACATCGCCCGAAG TGCAACTGGAACTGAGCCGCTGCTTTGGCGAACTTGAGCCGCACCCGATCGAGAAATTCCGGCTGGACGGCTATCCGGAA TTGATCCTGCTGACGAACGATGGCGGGCCTGTCGGCCCGGTCTATGACTTTGCCGGTGTTGCCACGACCCAGCGGATTCC CTGGCATACCGATCTGGCGTTCACGACCACACCCAATGCCGGCGCGCTTCTGCGCATGGTGCGCAAGGTTGAAACTGGCG GCCAGACCGGCTGGCTGGACACTGCGGCAGCCTATGACGAACTGGATCAAGCCACCAAGGACGAGATCGCCGACCTTGAG GCAGTGTACCTGTTTCGTGCGGGGCTCGAGGAAATGCGCTTCAACCGGCCGGATGGGAAGCGCTTGTCACCTCGCAAGGA CAATTATCCCGATTTCCCGCCGGTCGCCAACCCGCTGGTTTGGACTCATCCCGAAACCGGGCGAAAGGTGCTGAACCTCA GCACACTGAACATCGAGTACATCGTCGGCCAGCGCGACGAACAAGGGGACGCGCTGATCCGCCGTTTGATCGATCACGCG TTGCAGCCTCGTTTCCAGTACGTCCACGAGTGGGAAAACAACGACATGGTGCTGTGGGATAACCGGCGCACGATGCATGC CGCGTTCGGCCATCCCGTCGATCAGGTCCGGGTCGTTCATCGCACCACGATCAAGGGCAACGTGGCGATGGGCAGGGTCA TGCCGGAAGCCGCCGAAGTGGGAGCCGGGGCGTGA
Upstream 100 bases:
>100_bases CGCACGGCTACTGCGCTTTCATGCATTTGCACGATGTGCCGAATGCGAAACGCGCGCACATCAGGTCTGCAAACGCAATC AAGTAGAGAGGAAGCTGGTG
Downstream 100 bases:
>100_bases GCGCGTTCGACATCGTCCTTCGCGAGGGCACCGTGGTTGATGGGACCGGCGCCGACCCATTCGTGGCCGATGTCGCGATT TCAGGAGGACGGATCGCAGC
Product: taurine catabolism dioxygenase TauD/TfdA
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MGFEVRALDGSFGREIVGLDISAAIAPDVAVALKQVWLDHGVLVFRGIGTSPEVQLELSRCFGELEPHPIEKFRLDGYPE LILLTNDGGPVGPVYDFAGVATTQRIPWHTDLAFTTTPNAGALLRMVRKVETGGQTGWLDTAAAYDELDQATKDEIADLE AVYLFRAGLEEMRFNRPDGKRLSPRKDNYPDFPPVANPLVWTHPETGRKVLNLSTLNIEYIVGQRDEQGDALIRRLIDHA LQPRFQYVHEWENNDMVLWDNRRTMHAAFGHPVDQVRVVHRTTIKGNVAMGRVMPEAAEVGAGA
Sequences:
>Translated_304_residues MGFEVRALDGSFGREIVGLDISAAIAPDVAVALKQVWLDHGVLVFRGIGTSPEVQLELSRCFGELEPHPIEKFRLDGYPE LILLTNDGGPVGPVYDFAGVATTQRIPWHTDLAFTTTPNAGALLRMVRKVETGGQTGWLDTAAAYDELDQATKDEIADLE AVYLFRAGLEEMRFNRPDGKRLSPRKDNYPDFPPVANPLVWTHPETGRKVLNLSTLNIEYIVGQRDEQGDALIRRLIDHA LQPRFQYVHEWENNDMVLWDNRRTMHAAFGHPVDQVRVVHRTTIKGNVAMGRVMPEAAEVGAGA >Mature_303_residues GFEVRALDGSFGREIVGLDISAAIAPDVAVALKQVWLDHGVLVFRGIGTSPEVQLELSRCFGELEPHPIEKFRLDGYPEL ILLTNDGGPVGPVYDFAGVATTQRIPWHTDLAFTTTPNAGALLRMVRKVETGGQTGWLDTAAAYDELDQATKDEIADLEA VYLFRAGLEEMRFNRPDGKRLSPRKDNYPDFPPVANPLVWTHPETGRKVLNLSTLNIEYIVGQRDEQGDALIRRLIDHAL QPRFQYVHEWENNDMVLWDNRRTMHAAFGHPVDQVRVVHRTTIKGNVAMGRVMPEAAEVGAGA
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=291, Percent_Identity=30.5841924398625, Blast_Score=131, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6322971, Length=313, Percent_Identity=25.8785942492013, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 33845; Mature: 33714
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFEVRALDGSFGREIVGLDISAAIAPDVAVALKQVWLDHGVLVFRGIGTSPEVQLELSR CCEEEEECCCCCCCEEEEEEEHHHHCHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEHHH CFGELEPHPIEKFRLDGYPELILLTNDGGPVGPVYDFAGVATTQRIPWHTDLAFTTTPNA HHCCCCCCCCHHEECCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCH GALLRMVRKVETGGQTGWLDTAAAYDELDQATKDEIADLEAVYLFRAGLEEMRFNRPDGK HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCC RLSPRKDNYPDFPPVANPLVWTHPETGRKVLNLSTLNIEYIVGQRDEQGDALIRRLIDHA CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHH LQPRFQYVHEWENNDMVLWDNRRTMHAAFGHPVDQVRVVHRTTIKGNVAMGRVMPEAAEV HCCHHHHHHCCCCCCEEEECCCCEEEHHHCCCHHHEEEEHEEEECCCEEECCCCCHHHHC GAGA CCCC >Mature Secondary Structure GFEVRALDGSFGREIVGLDISAAIAPDVAVALKQVWLDHGVLVFRGIGTSPEVQLELSR CEEEEECCCCCCCEEEEEEEHHHHCHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEHHH CFGELEPHPIEKFRLDGYPELILLTNDGGPVGPVYDFAGVATTQRIPWHTDLAFTTTPNA HHCCCCCCCCHHEECCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCH GALLRMVRKVETGGQTGWLDTAAAYDELDQATKDEIADLEAVYLFRAGLEEMRFNRPDGK HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCC RLSPRKDNYPDFPPVANPLVWTHPETGRKVLNLSTLNIEYIVGQRDEQGDALIRRLIDHA CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHH LQPRFQYVHEWENNDMVLWDNRRTMHAAFGHPVDQVRVVHRTTIKGNVAMGRVMPEAAEV HCCHHHHHHCCCCCCEEEECCCCEEEHHHCCCHHHEEEEHEEEECCCEEECCCCCHHHHC GAGA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]