| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201053
Identifier: 87201053
GI number: 87201053
Start: 3255584
End: 3255883
Strand: Direct
Name: 87201053
Synonym: Saro_3041
Alternate gene names: NA
Gene position: 3255584-3255883 (Clockwise)
Preceding gene: 87201052
Following gene: 87201054
Centisome position: 91.41
GC content: 59.67
Gene sequence:
>300_bases GTGCAACTACTTGGTGAAGATTGCCGGATTCCGGACACTTACCGCAACTTTTCCGATTTCAAGAGAAACTTTCCGCAATT CCATTACGCGCGTGCGGCGAGCGATGTCGCATTGTCGCAACATCGTCATTCCGGTGTCATCTGTTACCTGTTTGGCGGCC CCACGCAGGCGGTTAAGGCCGCCGGCGACGGGCTGGCACGCAGGCGATTCCCTCGTTCCGGCCCGAAGCATCCGGCACGG CCAACCGCGCCACAACCGCGCTTTCGGGCGCAGCCAAACGGGGTCTATACATGCAGATGA
Upstream 100 bases:
>100_bases CTCGCCAGGCGAACGACACGAACTGATCCTGCGGGGGTCGGACGCGCACGACGCCCCGCCTCGTTCCGCACTGCAGCAAC TTTTTTGACCTGTTGCCGCA
Downstream 100 bases:
>100_bases AATTCCTGGTCGCCGCGTCGACCATCGCGATCGGCAGCGTCGCGCTGGCCAGCGCCGCCCACGCCCAGTCGACCGGTTCG GTCGACGTCGAAGAGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MQLLGEDCRIPDTYRNFSDFKRNFPQFHYARAASDVALSQHRHSGVICYLFGGPTQAVKAAGDGLARRRFPRSGPKHPAR PTAPQPRFRAQPNGVYTCR
Sequences:
>Translated_99_residues MQLLGEDCRIPDTYRNFSDFKRNFPQFHYARAASDVALSQHRHSGVICYLFGGPTQAVKAAGDGLARRRFPRSGPKHPAR PTAPQPRFRAQPNGVYTCR >Mature_99_residues MQLLGEDCRIPDTYRNFSDFKRNFPQFHYARAASDVALSQHRHSGVICYLFGGPTQAVKAAGDGLARRRFPRSGPKHPAR PTAPQPRFRAQPNGVYTCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11159; Mature: 11159
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLLGEDCRIPDTYRNFSDFKRNFPQFHYARAASDVALSQHRHSGVICYLFGGPTQAVKA CCCCCCCCCCCHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH AGDGLARRRFPRSGPKHPARPTAPQPRFRAQPNGVYTCR HCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure MQLLGEDCRIPDTYRNFSDFKRNFPQFHYARAASDVALSQHRHSGVICYLFGGPTQAVKA CCCCCCCCCCCHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH AGDGLARRRFPRSGPKHPARPTAPQPRFRAQPNGVYTCR HCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA