| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is fecA [C]
Identifier: 87201054
GI number: 87201054
Start: 3255880
End: 3258405
Strand: Direct
Name: fecA [C]
Synonym: Saro_3042
Alternate gene names: 87201054
Gene position: 3255880-3258405 (Clockwise)
Preceding gene: 87201053
Following gene: 87201056
Centisome position: 91.42
GC content: 64.57
Gene sequence:
>2526_bases ATGAAATTCCTGGTCGCCGCGTCGACCATCGCGATCGGCAGCGTCGCGCTGGCCAGCGCCGCCCACGCCCAGTCGACCGG TTCGGTCGACGTCGAAGAGGCGATCGTCGTGACCGGCACGCGCGCGGATGCCGCCGTCAACGGCTTCAAGGCCCCCGAAA CCCCCAAGGCCAAGGCCGTCCTGACCCAGGAACTCGTCGCTCGGCAGAACCCCGGCAAGGCGATCTTCGACACGATCAAC ATCGTGCCGGGCGTCAATTTCACCAGCACCGACCCCTATGGCGCCGCAGGCGGCAACTTGCGCATTCGCGGCTTCGACGG CGCGCGCATCTCGGCCACGTTCGACGGCGTCCAGGTCAACGATTCGGGCAACTATTCGCTCTACACCAACCAGCAGCTCG ACTCCGAACTGATCGAGCAGGTCAACATCAACTTCGGCGCGACCGACGTCGACAGCCCGACCGCGAGTGCTGCGGGCGGC ACCGTCAACTACCGCACCCGCCTGCCCAAGGAAGAGCTTGGCGCCGCGATCAACTATTCGCACGGCACCTTCAACTACAA CCGCGTGTTCGGCGTGATCGACACCGGCGTGTTCACGCCCTTCGGCACCCGCGCGTTCTTCTCGGCCAGCGACACCAAGT ACGACCAGTTCCGCGGCCCAGGCGGCATCCACAAGCAGCAGTACAACGTCCGCGTGTACCAGCCGATCGGCGAAAACGGT GATTTCGTGAGCCTCGCAGGCCACTACAACGAGAACCGCAACAACTTCTATCGCCGCGTCGGCATCAACGACATGCGCAC CCTGCTGGGCTCCGCCACGATCCCGGCGTCGGCCAGCATCACTCCCGCTTCCCCGCTCGATCTCGGCAACCTGACCGACG CGCAGCAGGAGACCATCTTCAACTTCAACAACGATGCCACCTGCACGCTGCCCAGCAGCAGCGGTGGTGCGGGCCAACAG TCGGACGCGTCGTCCTGCGCCAACTACTACAATACCTCGATCAACCCTTCGAACACCGGCAACATCCGCTTCAACTCGCG CTTCGCGCTGAGCGAGAAGCTGATCGCGACGCTTGATGCCAGCTATCAGTATGTCCTCGCCAATGGCGGCGGCACCTCGG TCTTCGCGGAATCCGACGCCAACCGCAGCGTCTCGGGCGTCTACAGCCGCCAGGGAACGCGCATCGGCGGTGGCGTCGCG AGCGGCGTCGACATCAATGGCGATGGCGATACGGATGATCTCGTGCGTCTGCTGTTCCCGTCGAACACCCGCACGCACCG TCTCGGCGCCACGCTTTCGCTGCGCTACGAAGCGTCGCCGGAAAATACCTTCCGCGTTGCCTATACCTGGGACCGCGCCA AGCACCGCCAGACCGGCGAAGCGGGTCGGCTCGACCAGCTCGGCAACCCGCTGAACGTCTTCGGCGGCATCGGCGACGAT GATTCCGCGGTGAAGGATGCGGCCGGCAACGTCCTCCAGAAGCGCGACCGCCTGTCCTACGCGATCCTGCACCAGGTCGC GGGCGAATACATCGGCAAGTACTTCGACAATACGCTGACCGTGCAGGCCGGCGTGCGCGCGCCGTTCTTCCGCCGCAACC TGACCAACAACTGCTGGACTATCGCCGGTAGCTCGAACGACGCCTACTGCACCTCGGAAAGCGATGCCGTGGTCGAAGCC AAGTACCCGGCCTATGCCGCGCCCTACGCCGCCCGCAAGGTGGCCTACAGCGCAGTCCTGCCCAATGCCGGCTTCGTCTA CAAGATCACGCCGCAGGTCAACGTGTTCGGCAACTTCAGCCAGGGCTTCTCGGCCCCGCGTACCGACAACCTCTACGGGT TCGATGGCGTGAAGATCCAGCCGACCTCGCTGGTGAAGCCGGAACGCACCAACAGCTTCGACCTCGGCGCGCGCTATACC AGCCGCGTCGTCCAGGCCCAGGCCAGCGCATGGTACATCGGGTACAAGAACCGCATCATCTCGTCGCAGGTGCTGCTCGA GGACGGCAGCTCGCTCAACCTCGACCGCAACGTCGGTCGCGTGCGCAGCTACGGCTTCGACGCCAGCGTCGCGGTGCGCC CGGTCGACATGTTCTCGCTCTACACCTTCGCGTCCTACACCAACGCGAAGCTGAGGGACGACGTGGTCTCGCCCGCCGGC GCGATCCTCTCGCCGACCAAGGGCAAGTTCGTGGCCGAAACGCCGAAGTGGCAGGTCGGCGGCCGCGCCCAGTTCGACTA CGAGCCCGTCTCGATTGGCGCGCAGGTCAAGTACGTGGGCGACCGCTTCCTGACCGACATCAACGACGTGATCGCACCGT CCTACACCACGGTCGATCTCGATGCGCGCGTCAACCTCGGCAAGGTCAACGACAAGGGTTCGATCTACCTGCAGCTCAAC GTGATCAACCTGTTCGACAAGTTCTACATCGGCAACCTGTCGACGCAGGCTGCCGCCTCGAACAACCCGCAGGTCGAGTT CGGCTCGCCGCGCACTTTCGTCGGCTCGATCCACTTCGAGTTCTGA
Upstream 100 bases:
>100_bases CACGCAGGCGATTCCCTCGTTCCGGCCCGAAGCATCCGGCACGGCCAACCGCGCCACAACCGCGCTTTCGGGCGCAGCCA AACGGGGTCTATACATGCAG
Downstream 100 bases:
>100_bases CCCGGCCGACAAGGCCGACCGGAATGGGCGCGGGGGGAGAGATCCTCCCGCGCCTTTTCATTGCGCTTTACCGGTAGACG CAGGAATCGAGCGCACCGTT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor; NB-Dependent Siderophore Receptor; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor-Like Protein; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Plug; NB-Dependent Receptor Protein; Outer Membrane Receptor Protein; Ferrichrome-Iron Outermembrane Receptor Protein
Number of amino acids: Translated: 841; Mature: 841
Protein sequence:
>841_residues MKFLVAASTIAIGSVALASAAHAQSTGSVDVEEAIVVTGTRADAAVNGFKAPETPKAKAVLTQELVARQNPGKAIFDTIN IVPGVNFTSTDPYGAAGGNLRIRGFDGARISATFDGVQVNDSGNYSLYTNQQLDSELIEQVNINFGATDVDSPTASAAGG TVNYRTRLPKEELGAAINYSHGTFNYNRVFGVIDTGVFTPFGTRAFFSASDTKYDQFRGPGGIHKQQYNVRVYQPIGENG DFVSLAGHYNENRNNFYRRVGINDMRTLLGSATIPASASITPASPLDLGNLTDAQQETIFNFNNDATCTLPSSSGGAGQQ SDASSCANYYNTSINPSNTGNIRFNSRFALSEKLIATLDASYQYVLANGGGTSVFAESDANRSVSGVYSRQGTRIGGGVA SGVDINGDGDTDDLVRLLFPSNTRTHRLGATLSLRYEASPENTFRVAYTWDRAKHRQTGEAGRLDQLGNPLNVFGGIGDD DSAVKDAAGNVLQKRDRLSYAILHQVAGEYIGKYFDNTLTVQAGVRAPFFRRNLTNNCWTIAGSSNDAYCTSESDAVVEA KYPAYAAPYAARKVAYSAVLPNAGFVYKITPQVNVFGNFSQGFSAPRTDNLYGFDGVKIQPTSLVKPERTNSFDLGARYT SRVVQAQASAWYIGYKNRIISSQVLLEDGSSLNLDRNVGRVRSYGFDASVAVRPVDMFSLYTFASYTNAKLRDDVVSPAG AILSPTKGKFVAETPKWQVGGRAQFDYEPVSIGAQVKYVGDRFLTDINDVIAPSYTTVDLDARVNLGKVNDKGSIYLQLN VINLFDKFYIGNLSTQAAASNNPQVEFGSPRTFVGSIHFEF
Sequences:
>Translated_841_residues MKFLVAASTIAIGSVALASAAHAQSTGSVDVEEAIVVTGTRADAAVNGFKAPETPKAKAVLTQELVARQNPGKAIFDTIN IVPGVNFTSTDPYGAAGGNLRIRGFDGARISATFDGVQVNDSGNYSLYTNQQLDSELIEQVNINFGATDVDSPTASAAGG TVNYRTRLPKEELGAAINYSHGTFNYNRVFGVIDTGVFTPFGTRAFFSASDTKYDQFRGPGGIHKQQYNVRVYQPIGENG DFVSLAGHYNENRNNFYRRVGINDMRTLLGSATIPASASITPASPLDLGNLTDAQQETIFNFNNDATCTLPSSSGGAGQQ SDASSCANYYNTSINPSNTGNIRFNSRFALSEKLIATLDASYQYVLANGGGTSVFAESDANRSVSGVYSRQGTRIGGGVA SGVDINGDGDTDDLVRLLFPSNTRTHRLGATLSLRYEASPENTFRVAYTWDRAKHRQTGEAGRLDQLGNPLNVFGGIGDD DSAVKDAAGNVLQKRDRLSYAILHQVAGEYIGKYFDNTLTVQAGVRAPFFRRNLTNNCWTIAGSSNDAYCTSESDAVVEA KYPAYAAPYAARKVAYSAVLPNAGFVYKITPQVNVFGNFSQGFSAPRTDNLYGFDGVKIQPTSLVKPERTNSFDLGARYT SRVVQAQASAWYIGYKNRIISSQVLLEDGSSLNLDRNVGRVRSYGFDASVAVRPVDMFSLYTFASYTNAKLRDDVVSPAG AILSPTKGKFVAETPKWQVGGRAQFDYEPVSIGAQVKYVGDRFLTDINDVIAPSYTTVDLDARVNLGKVNDKGSIYLQLN VINLFDKFYIGNLSTQAAASNNPQVEFGSPRTFVGSIHFEF >Mature_841_residues MKFLVAASTIAIGSVALASAAHAQSTGSVDVEEAIVVTGTRADAAVNGFKAPETPKAKAVLTQELVARQNPGKAIFDTIN IVPGVNFTSTDPYGAAGGNLRIRGFDGARISATFDGVQVNDSGNYSLYTNQQLDSELIEQVNINFGATDVDSPTASAAGG TVNYRTRLPKEELGAAINYSHGTFNYNRVFGVIDTGVFTPFGTRAFFSASDTKYDQFRGPGGIHKQQYNVRVYQPIGENG DFVSLAGHYNENRNNFYRRVGINDMRTLLGSATIPASASITPASPLDLGNLTDAQQETIFNFNNDATCTLPSSSGGAGQQ SDASSCANYYNTSINPSNTGNIRFNSRFALSEKLIATLDASYQYVLANGGGTSVFAESDANRSVSGVYSRQGTRIGGGVA SGVDINGDGDTDDLVRLLFPSNTRTHRLGATLSLRYEASPENTFRVAYTWDRAKHRQTGEAGRLDQLGNPLNVFGGIGDD DSAVKDAAGNVLQKRDRLSYAILHQVAGEYIGKYFDNTLTVQAGVRAPFFRRNLTNNCWTIAGSSNDAYCTSESDAVVEA KYPAYAAPYAARKVAYSAVLPNAGFVYKITPQVNVFGNFSQGFSAPRTDNLYGFDGVKIQPTSLVKPERTNSFDLGARYT SRVVQAQASAWYIGYKNRIISSQVLLEDGSSLNLDRNVGRVRSYGFDASVAVRPVDMFSLYTFASYTNAKLRDDVVSPAG AILSPTKGKFVAETPKWQVGGRAQFDYEPVSIGAQVKYVGDRFLTDINDVIAPSYTTVDLDARVNLGKVNDKGSIYLQLN VINLFDKFYIGNLSTQAAASNNPQVEFGSPRTFVGSIHFEF
Specific function: Feca Is The Outer Membrane Receptor Protein In The Iron(III) Dicitrate Transport System. [C]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90558; Mature: 90558
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLVAASTIAIGSVALASAAHAQSTGSVDVEEAIVVTGTRADAAVNGFKAPETPKAKAV CEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCHHHH LTQELVARQNPGKAIFDTINIVPGVNFTSTDPYGAAGGNLRIRGFDGARISATFDGVQVN HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCEEEC DSGNYSLYTNQQLDSELIEQVNINFGATDVDSPTASAAGGTVNYRTRLPKEELGAAINYS CCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCEEECC HGTFNYNRVFGVIDTGVFTPFGTRAFFSASDTKYDQFRGPGGIHKQQYNVRVYQPIGENG CCCEEEEEEEEEEECCCCCCCCCEEEEECCCCCHHHCCCCCCCCCEEEEEEEEECCCCCC DFVSLAGHYNENRNNFYRRVGINDMRTLLGSATIPASASITPASPLDLGNLTDAQQETIF CEEEEECCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEE NFNNDATCTLPSSSGGAGQQSDASSCANYYNTSINPSNTGNIRFNSRFALSEKLIATLDA ECCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCEEHHHHHHHHEECC SYQYVLANGGGTSVFAESDANRSVSGVYSRQGTRIGGGVASGVDINGDGDTDDLVRLLFP CEEEEEECCCCCEEEECCCCCCCEEEHHHCCCCEECCCEECCEEECCCCCHHHEEEEECC SNTRTHRLGATLSLRYEASPENTFRVAYTWDRAKHRQTGEAGRLDQLGNPLNVFGGIGDD CCCCEEEECCEEEEEEECCCCCEEEEEEEECCHHCCCCCCCCCHHHCCCCCEECCCCCCC DSAVKDAAGNVLQKRDRLSYAILHQVAGEYIGKYFDNTLTVQAGVRAPFFRRNLTNNCWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCCCCEE IAGSSNDAYCTSESDAVVEAKYPAYAAPYAARKVAYSAVLPNAGFVYKITPQVNVFGNFS EECCCCCCEEECCCCEEEEECCCCCCCCHHHHHHHHEEECCCCCEEEEECCCEEEEECCC QGFSAPRTDNLYGFDGVKIQPTSLVKPERTNSFDLGARYTSRVVQAQASAWYIGYKNRII CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEE SSQVLLEDGSSLNLDRNVGRVRSYGFDASVAVRPVDMFSLYTFASYTNAKLRDDVVSPAG EEEEEEECCCCCCCCCCCCHHHHCCCCCEEEEEEEHHHHHHHHHHCCCCCHHHHHCCCCC AILSPTKGKFVAETPKWQVGGRAQFDYEPVSIGAQVKYVGDRFLTDINDVIAPSYTTVDL CEECCCCCCEEECCCCCCCCCEEECCCCCEECCEEEEEECHHHHHHHHHHHCCCEEEEEE DARVNLGKVNDKGSIYLQLNVINLFDKFYIGNLSTQAAASNNPQVEFGSPRTFVGSIHFE ECEEEEEEECCCCEEEEEEEEEHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEEEC F C >Mature Secondary Structure MKFLVAASTIAIGSVALASAAHAQSTGSVDVEEAIVVTGTRADAAVNGFKAPETPKAKAV CEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCHHHH LTQELVARQNPGKAIFDTINIVPGVNFTSTDPYGAAGGNLRIRGFDGARISATFDGVQVN HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCEEEC DSGNYSLYTNQQLDSELIEQVNINFGATDVDSPTASAAGGTVNYRTRLPKEELGAAINYS CCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCEEECC HGTFNYNRVFGVIDTGVFTPFGTRAFFSASDTKYDQFRGPGGIHKQQYNVRVYQPIGENG CCCEEEEEEEEEEECCCCCCCCCEEEEECCCCCHHHCCCCCCCCCEEEEEEEEECCCCCC DFVSLAGHYNENRNNFYRRVGINDMRTLLGSATIPASASITPASPLDLGNLTDAQQETIF CEEEEECCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEE NFNNDATCTLPSSSGGAGQQSDASSCANYYNTSINPSNTGNIRFNSRFALSEKLIATLDA ECCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCEEHHHHHHHHEECC SYQYVLANGGGTSVFAESDANRSVSGVYSRQGTRIGGGVASGVDINGDGDTDDLVRLLFP CEEEEEECCCCCEEEECCCCCCCEEEHHHCCCCEECCCEECCEEECCCCCHHHEEEEECC SNTRTHRLGATLSLRYEASPENTFRVAYTWDRAKHRQTGEAGRLDQLGNPLNVFGGIGDD CCCCEEEECCEEEEEEECCCCCEEEEEEEECCHHCCCCCCCCCHHHCCCCCEECCCCCCC DSAVKDAAGNVLQKRDRLSYAILHQVAGEYIGKYFDNTLTVQAGVRAPFFRRNLTNNCWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCCCCEE IAGSSNDAYCTSESDAVVEAKYPAYAAPYAARKVAYSAVLPNAGFVYKITPQVNVFGNFS EECCCCCCEEECCCCEEEEECCCCCCCCHHHHHHHHEEECCCCCEEEEECCCEEEEECCC QGFSAPRTDNLYGFDGVKIQPTSLVKPERTNSFDLGARYTSRVVQAQASAWYIGYKNRII CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEE SSQVLLEDGSSLNLDRNVGRVRSYGFDASVAVRPVDMFSLYTFASYTNAKLRDDVVSPAG EEEEEEECCCCCCCCCCCCHHHHCCCCCEEEEEEEHHHHHHHHHHCCCCCHHHHHCCCCC AILSPTKGKFVAETPKWQVGGRAQFDYEPVSIGAQVKYVGDRFLTDINDVIAPSYTTVDL CEECCCCCCEEECCCCCCCCCEEECCCCCEECCEEEEEECHHHHHHHHHHHCCCEEEEEE DARVNLGKVNDKGSIYLQLNVINLFDKFYIGNLSTQAAASNNPQVEFGSPRTFVGSIHFE ECEEEEEEECCCCEEEEEEEEEHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEEEC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA