| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201051
Identifier: 87201051
GI number: 87201051
Start: 3253707
End: 3254489
Strand: Reverse
Name: 87201051
Synonym: Saro_3039
Alternate gene names: NA
Gene position: 3254489-3253707 (Counterclockwise)
Preceding gene: 87201055
Following gene: 87201049
Centisome position: 91.38
GC content: 64.37
Gene sequence:
>783_bases GTGGGACGAACGCGCAAAGAACAGCAAAAGGATTTTGTCATGCGTACGTCCATCAAGGCCCTTCTGGCCTCGACCCTCCT TGCGGCCGGTCTGGCCGCTACCCCGGCCTTCGCGCAGGAAGAAGCCGCAAGCGATTTCACCGTCACCGGCAACGTTGCCG CCGTCACCGACTATCGCTTCCGCGGCATCTCGCTCTCGGGCGGCGACTTCGCGGTTCAGGGCTCGATCGGCGTCAGCCAC TCGAGCGGCTTCTATGTCGGCGCCTGGGCATCCAGCCTCGAGGACTCGCCGGTCTATGGCAGCACCGAACTCGACGTCTA TGGCGGCTGGACCGGTGAAGTCACCTCCGGCCTGACCTTCGACGGCGGCCTGCTCTACTATGTCTATCCCAACGGCGACG TCGGCAAGGCCAACGTGTACGAGCCCTATGCCTCGCTTTCGGCAGGCGTCGGCCCGGCAACCGCCAAGGTCGGCGTGGCC TATGCGTGGAAGCAGGATTCGCTCGGCGGCGACGACAACCTCTATGTCTATGGCGAGCTTTCCGGTGCGATCCCCGAAAC GCCGATCTCGCTTTCGGCGCACCTGGGGTACACCGACGGCGCGCTGTCGCCCAAGCTGCTGACCGGTGAAAGCACCAAGG GCGGCTTCGACTACAACGTCGGCGCGACCTACAATGTCACCGACAAGCTGGCCGTGGGCGTCAGCTACGTCGGCGTCGAC GGCGCTTCGATCGACAGCTTCTCGAACGACGCCGTCGTCGGCACGATCAAGCTCTCGTTCTGA
Upstream 100 bases:
>100_bases CCGGACATAATTTGCTTGTGCGGCGCAGCATCGGGAGGCACCTCTATCAGGGCAAGCCCCAAGGACCTCCCGCGACACGA GGAGTCCAGGGCGAGCGCAG
Downstream 100 bases:
>100_bases TCGATCGGGTTGGGTCCGCTCCTGCTGGGCGGACCGCGCGTGGGGCCCGCGTCGCGCTTGCGATGCGGGCCTTGCTGCGT CAGGGTCTGGCGCCGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MGRTRKEQQKDFVMRTSIKALLASTLLAAGLAATPAFAQEEAASDFTVTGNVAAVTDYRFRGISLSGGDFAVQGSIGVSH SSGFYVGAWASSLEDSPVYGSTELDVYGGWTGEVTSGLTFDGGLLYYVYPNGDVGKANVYEPYASLSAGVGPATAKVGVA YAWKQDSLGGDDNLYVYGELSGAIPETPISLSAHLGYTDGALSPKLLTGESTKGGFDYNVGATYNVTDKLAVGVSYVGVD GASIDSFSNDAVVGTIKLSF
Sequences:
>Translated_260_residues MGRTRKEQQKDFVMRTSIKALLASTLLAAGLAATPAFAQEEAASDFTVTGNVAAVTDYRFRGISLSGGDFAVQGSIGVSH SSGFYVGAWASSLEDSPVYGSTELDVYGGWTGEVTSGLTFDGGLLYYVYPNGDVGKANVYEPYASLSAGVGPATAKVGVA YAWKQDSLGGDDNLYVYGELSGAIPETPISLSAHLGYTDGALSPKLLTGESTKGGFDYNVGATYNVTDKLAVGVSYVGVD GASIDSFSNDAVVGTIKLSF >Mature_259_residues GRTRKEQQKDFVMRTSIKALLASTLLAAGLAATPAFAQEEAASDFTVTGNVAAVTDYRFRGISLSGGDFAVQGSIGVSHS SGFYVGAWASSLEDSPVYGSTELDVYGGWTGEVTSGLTFDGGLLYYVYPNGDVGKANVYEPYASLSAGVGPATAKVGVAY AWKQDSLGGDDNLYVYGELSGAIPETPISLSAHLGYTDGALSPKLLTGESTKGGFDYNVGATYNVTDKLAVGVSYVGVDG ASIDSFSNDAVVGTIKLSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26870; Mature: 26739
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTRKEQQKDFVMRTSIKALLASTLLAAGLAATPAFAQEEAASDFTVTGNVAAVTDYRF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCEEEEEEEEE RGISLSGGDFAVQGSIGVSHSSGFYVGAWASSLEDSPVYGSTELDVYGGWTGEVTSGLTF EEEEECCCCEEEECCCEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEE DGGLLYYVYPNGDVGKANVYEPYASLSAGVGPATAKVGVAYAWKQDSLGGDDNLYVYGEL CCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEE SGAIPETPISLSAHLGYTDGALSPKLLTGESTKGGFDYNVGATYNVTDKLAVGVSYVGVD CCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCEEECCCCEECCCCCEEEEEEEEECC GASIDSFSNDAVVGTIKLSF CCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure GRTRKEQQKDFVMRTSIKALLASTLLAAGLAATPAFAQEEAASDFTVTGNVAAVTDYRF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCEEEEEEEEE RGISLSGGDFAVQGSIGVSHSSGFYVGAWASSLEDSPVYGSTELDVYGGWTGEVTSGLTF EEEEECCCCEEEECCCEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEE DGGLLYYVYPNGDVGKANVYEPYASLSAGVGPATAKVGVAYAWKQDSLGGDDNLYVYGEL CCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEE SGAIPETPISLSAHLGYTDGALSPKLLTGESTKGGFDYNVGATYNVTDKLAVGVSYVGVD CCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCEEECCCCEECCCCCEEEEEEEEECC GASIDSFSNDAVVGTIKLSF CCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA