| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is mtgA [H]
Identifier: 87201055
GI number: 87201055
Start: 3258473
End: 3259195
Strand: Reverse
Name: mtgA [H]
Synonym: Saro_3043
Alternate gene names: 87201055
Gene position: 3259195-3258473 (Counterclockwise)
Preceding gene: 87201057
Following gene: 87201051
Centisome position: 91.51
GC content: 64.04
Gene sequence:
>723_bases ATGCTTGACGAGTTGAAGAACGAACGCCGCTCCGTGTCCACGCATCCTGGCCTTGCGAGCCGGGTCGGATGGTTCGTGGC CAAGCTCCTTGCCGCTTTCCTGTTCATCTCGGTCGCGCAGGTGATCATCTACAAGTTCGTCCCCGTGCCGATCACGCTGA CCATGCTGCTGGACGAGCATTCGATCACCAAGGACTGGACGCCGCTCGACGAGATCGACCGCGACATGGTCGATGCCGTG ATTTCAGGCGAGGATGGCAAGTTCTGCCTGCACAACGGCTTCGATCACGAGGCGATGATGCAGGCGTTCCGGCGCAACCA GCAGGGCGGGCGCATCCGGGGCGGGTCCACGATCAGCCAGCAGACGGCCAAGAACGTGTTCCTGTGGCAGGGGGGCGGTT ATCTGCGCAAGGGGCTTGAGGCCTGGTACACCGTGCTGATCGAGACGATCTGGGGCAAGCGGCGGATCATGGAAGTCTAC CTCAATGTCGCCGAAACCGGGATCGGTACCTACGGGGTGGAGGCTGGCGCGCAGCGCTATTACGGCAAGAGCGCGCGCAA GCTCAGTTCGGTCGAGGCGGCGCGGATCGCCGCCGTGCTGCCCCTGCCCAAGAAGCGCGAGGTCAAGGGGGCCGGAGGCT TCACGCGCCGTCACGGCAATGCCATCGCCCGCCGCGTCACGGTGGTGAAGAACGGTGCGCTCGATTCCTGCGTCTACCGG TAA
Upstream 100 bases:
>100_bases TGCTCACAGGAACTTGCGCCATTTTGGCGGCATGCTTCTCCAGCGGTTCGAGGCCTCCCCGCCTTGCGCAGCGCCGCCGA CTTCCGCATATTCGCGGCCA
Downstream 100 bases:
>100_bases AGCGCAATGAAAAGGCGCGGGAGGATCTCTCCCCCCGCGCCCATTCCGGTCGGCCTTGTCGGCCGGGTCAGAACTCGAAG TGGATCGAGCCGACGAAAGT
Product: monofunctional biosynthetic peptidoglycan transglycosylase
Products: NA
Alternate protein names: Monofunctional TGase [H]
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MLDELKNERRSVSTHPGLASRVGWFVAKLLAAFLFISVAQVIIYKFVPVPITLTMLLDEHSITKDWTPLDEIDRDMVDAV ISGEDGKFCLHNGFDHEAMMQAFRRNQQGGRIRGGSTISQQTAKNVFLWQGGGYLRKGLEAWYTVLIETIWGKRRIMEVY LNVAETGIGTYGVEAGAQRYYGKSARKLSSVEAARIAAVLPLPKKREVKGAGGFTRRHGNAIARRVTVVKNGALDSCVYR
Sequences:
>Translated_240_residues MLDELKNERRSVSTHPGLASRVGWFVAKLLAAFLFISVAQVIIYKFVPVPITLTMLLDEHSITKDWTPLDEIDRDMVDAV ISGEDGKFCLHNGFDHEAMMQAFRRNQQGGRIRGGSTISQQTAKNVFLWQGGGYLRKGLEAWYTVLIETIWGKRRIMEVY LNVAETGIGTYGVEAGAQRYYGKSARKLSSVEAARIAAVLPLPKKREVKGAGGFTRRHGNAIARRVTVVKNGALDSCVYR >Mature_240_residues MLDELKNERRSVSTHPGLASRVGWFVAKLLAAFLFISVAQVIIYKFVPVPITLTMLLDEHSITKDWTPLDEIDRDMVDAV ISGEDGKFCLHNGFDHEAMMQAFRRNQQGGRIRGGSTISQQTAKNVFLWQGGGYLRKGLEAWYTVLIETIWGKRRIMEVY LNVAETGIGTYGVEAGAQRYYGKSARKLSSVEAARIAAVLPLPKKREVKGAGGFTRRHGNAIARRVTVVKNGALDSCVYR
Specific function: Cell wall formation [H]
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 51 family [H]
Homologues:
Organism=Escherichia coli, GI1789601, Length=213, Percent_Identity=42.7230046948357, Blast_Score=162, Evalue=1e-41, Organism=Escherichia coli, GI87082258, Length=136, Percent_Identity=38.2352941176471, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1786343, Length=183, Percent_Identity=27.3224043715847, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001264 - InterPro: IPR011812 [H]
Pfam domain/function: PF00912 Transgly [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 26747; Mature: 26747
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDELKNERRSVSTHPGLASRVGWFVAKLLAAFLFISVAQVIIYKFVPVPITLTMLLDEH CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC SITKDWTPLDEIDRDMVDAVISGEDGKFCLHNGFDHEAMMQAFRRNQQGGRIRGGSTISQ CCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCCEECCCCCHHH QTAKNVFLWQGGGYLRKGLEAWYTVLIETIWGKRRIMEVYLNVAETGIGTYGVEAGAQRY HHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH YGKSARKLSSVEAARIAAVLPLPKKREVKGAGGFTRRHGNAIARRVTVVKNGALDSCVYR HCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure MLDELKNERRSVSTHPGLASRVGWFVAKLLAAFLFISVAQVIIYKFVPVPITLTMLLDEH CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC SITKDWTPLDEIDRDMVDAVISGEDGKFCLHNGFDHEAMMQAFRRNQQGGRIRGGSTISQ CCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCCEECCCCCHHH QTAKNVFLWQGGGYLRKGLEAWYTVLIETIWGKRRIMEVYLNVAETGIGTYGVEAGAQRY HHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH YGKSARKLSSVEAARIAAVLPLPKKREVKGAGGFTRRHGNAIARRVTVVKNGALDSCVYR HCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA