| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is qhnDH [H]
Identifier: 87201042
GI number: 87201042
Start: 3241978
End: 3242304
Strand: Direct
Name: qhnDH [H]
Synonym: Saro_3030
Alternate gene names: 87201042
Gene position: 3241978-3242304 (Clockwise)
Preceding gene: 87201041
Following gene: 87201043
Centisome position: 91.03
GC content: 66.06
Gene sequence:
>327_bases ATGAAGCACCTTACCCCGCTCAACAGGAAAGCGCGGCGCATCGAGGAGACGATCTCCTCGACCGAGGAGGACGTCGTCGC CCTCCAGCAGAAGCCGATGCACGTGCCAATGGGCTGCACGCTGTCGTTCTCGCCCGGCTGGGAAGTCGATGCGGGTGGCG GCACCGCGGGTCTGTGCCAGCCGGCGGAGCGCGATCTCTACGACTGCTACGTCACCTGCTTCTGGCCGGTGCAGGTCCCC GACCACGTCAACTACTCGCCGGATTGGGCCAGCAACTGCGCCACCGCGGCCAAGGACTGGCGCAGCCTGGACATCATCTT CCCCTGA
Upstream 100 bases:
>100_bases GGATTCGCGAGTGGACCGACGCCTGCCTGCGCATCTACGGCACGGTCGCCGCTCGCAATCCCGAATTTCTCGAACGCTTT GCGACACGAAAGGGCCTGGC
Downstream 100 bases:
>100_bases TCAACTGGCCCTGATCCTCAGGCCCTGATCCGCTTGCTCAGACCTGCTGGCCCGGATCCGCTGGGCCAGATCCCCGGAAA CGCGCCGCGCAGGTGGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: QH-AmDH; Quinohemoprotein amine dehydrogenase 9 kDa subunit; Quinohemoprotein amine dehydrogenase catalytic subunit [H]
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MKHLTPLNRKARRIEETISSTEEDVVALQQKPMHVPMGCTLSFSPGWEVDAGGGTAGLCQPAERDLYDCYVTCFWPVQVP DHVNYSPDWASNCATAAKDWRSLDIIFP
Sequences:
>Translated_108_residues MKHLTPLNRKARRIEETISSTEEDVVALQQKPMHVPMGCTLSFSPGWEVDAGGGTAGLCQPAERDLYDCYVTCFWPVQVP DHVNYSPDWASNCATAAKDWRSLDIIFP >Mature_108_residues MKHLTPLNRKARRIEETISSTEEDVVALQQKPMHVPMGCTLSFSPGWEVDAGGGTAGLCQPAERDLYDCYVTCFWPVQVP DHVNYSPDWASNCATAAKDWRSLDIIFP
Specific function: Catalyzes the oxidative deamination of a wide range of aliphatic and aromatic amines [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015084 - ProDom: PD591508 [H]
Pfam domain/function: PF08992 QH-AmDH_gamma [H]
EC number: NA
Molecular weight: Translated: 12070; Mature: 12070
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLTPLNRKARRIEETISSTEEDVVALQQKPMHVPMGCTLSFSPGWEVDAGGGTAGLCQ CCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEECCCCCEEECCCCCCCCCC PAERDLYDCYVTCFWPVQVPDHVNYSPDWASNCATAAKDWRSLDIIFP CCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECC >Mature Secondary Structure MKHLTPLNRKARRIEETISSTEEDVVALQQKPMHVPMGCTLSFSPGWEVDAGGGTAGLCQ CCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEECCCCCEEECCCCCCCCCC PAERDLYDCYVTCFWPVQVPDHVNYSPDWASNCATAAKDWRSLDIIFP CCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11717396 [H]