| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201043
Identifier: 87201043
GI number: 87201043
Start: 3242442
End: 3243542
Strand: Direct
Name: 87201043
Synonym: Saro_3031
Alternate gene names: NA
Gene position: 3242442-3243542 (Clockwise)
Preceding gene: 87201042
Following gene: 87201044
Centisome position: 91.04
GC content: 62.13
Gene sequence:
>1101_bases ATGAAAAAGCTCGGTCTCTCCATTGCCGCCCTGCTCGCCGGAACGACCGTCGCGAGCGCTTCCGCCCAGGCCTCCACGCT GTTCATGGGCTCCTATCCCGACCGCATGCTGATCGTCGACGAGGCATCGGGCAAGGTCACCGACACGCTGACGCTCGCCT CCGGCCTGCCGACCTCGATGCGGATCTCGAACGACCGGAAGAAGATCTACGTCACCACGATCACGACCAGCGGGATTGAG GTGATCGACACCGCCACGAAGAAGGTGGTCAACTCCTTCAGCCTGAACACCCCGACCACGCGCTATCGCTTCAATGGCGG GGTGCCTGATCCTTCGGGGCGCTATTTCTACACGATGCTGACGAAGTTCGAGAAGCTGAACGACCGCTACCTCGTCAGCC CTCAGCAGTTCGCAGTGATCGACCTTCAAAAGAAAGCCGTGGTGCGCACGTCCGAAGTGCCCAAGGAAGATGACAGCAAC CCCAACGCCGGCTGGCGCACCAACTACATGATGTCCGAGGACGGCAAGACCTTGTTCGTGATCCGCGACAAGGTGCTCGT GCTCGACACCGCCGACCTCAAGGTCAAGGAGCGGATCGAGGTTTCGCGCCCCGAGGCCACCGGTATCGAGGGCGTGACCT TCGGCGGCGGGGTCGAAGCGCTGCGAAACCCGCACGAATACGTCTCGCTGTTCAACGCGACCGATCCCTACATTCACAAC AAGATCTTCGGCGTCGGGCGCTTCAACCTGGCGACCAAGGCCTTCGACTTCCGCCCGATCGGCCCCGCGCCCTATGGCAT GGCCGGCCTGCAGGTCTCTCCCGACCTCAAGCAGGGCTGGACGGTCGTCACCAACGGCAGCGTGGGCAACAAGCGGTGCG AATTCTGGCATCTCGACCTCACCACCAACCAGGTGAAGAACAAGGCCGAATTCCCCTGCCGTTCGCGCTTCCAGTTCGGC ATGTCGGGCGACGGCACGAAGCTCTACATCTACGGCGCCAGCTACGACATCGAGATCTACGACGCACAGACTCTGGCGCA CGAAAAGACGGTCGATCTCGGCGCGGACTCGACCGGCGCCGGGATGATAATCACCCAGTGA
Upstream 100 bases:
>100_bases TCAGACCTGCTGGCCCGGATCCGCTGGGCCAGATCCCCGGAAACGCGCCGCGCAGGTGGTGCCGACCGCCGTTCCAAACC CGACCGGAAGAGTGAACTTC
Downstream 100 bases:
>100_bases CCGGCGGGACGCACCTCGGCGTGGAGCTAGCACGTTGAGCGTGCTCCTGCGTGGCCAGGGCGTCGCGGTTTCGACCGCGG CGCACCTGCTTGGCCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MKKLGLSIAALLAGTTVASASAQASTLFMGSYPDRMLIVDEASGKVTDTLTLASGLPTSMRISNDRKKIYVTTITTSGIE VIDTATKKVVNSFSLNTPTTRYRFNGGVPDPSGRYFYTMLTKFEKLNDRYLVSPQQFAVIDLQKKAVVRTSEVPKEDDSN PNAGWRTNYMMSEDGKTLFVIRDKVLVLDTADLKVKERIEVSRPEATGIEGVTFGGGVEALRNPHEYVSLFNATDPYIHN KIFGVGRFNLATKAFDFRPIGPAPYGMAGLQVSPDLKQGWTVVTNGSVGNKRCEFWHLDLTTNQVKNKAEFPCRSRFQFG MSGDGTKLYIYGASYDIEIYDAQTLAHEKTVDLGADSTGAGMIITQ
Sequences:
>Translated_366_residues MKKLGLSIAALLAGTTVASASAQASTLFMGSYPDRMLIVDEASGKVTDTLTLASGLPTSMRISNDRKKIYVTTITTSGIE VIDTATKKVVNSFSLNTPTTRYRFNGGVPDPSGRYFYTMLTKFEKLNDRYLVSPQQFAVIDLQKKAVVRTSEVPKEDDSN PNAGWRTNYMMSEDGKTLFVIRDKVLVLDTADLKVKERIEVSRPEATGIEGVTFGGGVEALRNPHEYVSLFNATDPYIHN KIFGVGRFNLATKAFDFRPIGPAPYGMAGLQVSPDLKQGWTVVTNGSVGNKRCEFWHLDLTTNQVKNKAEFPCRSRFQFG MSGDGTKLYIYGASYDIEIYDAQTLAHEKTVDLGADSTGAGMIITQ >Mature_366_residues MKKLGLSIAALLAGTTVASASAQASTLFMGSYPDRMLIVDEASGKVTDTLTLASGLPTSMRISNDRKKIYVTTITTSGIE VIDTATKKVVNSFSLNTPTTRYRFNGGVPDPSGRYFYTMLTKFEKLNDRYLVSPQQFAVIDLQKKAVVRTSEVPKEDDSN PNAGWRTNYMMSEDGKTLFVIRDKVLVLDTADLKVKERIEVSRPEATGIEGVTFGGGVEALRNPHEYVSLFNATDPYIHN KIFGVGRFNLATKAFDFRPIGPAPYGMAGLQVSPDLKQGWTVVTNGSVGNKRCEFWHLDLTTNQVKNKAEFPCRSRFQFG MSGDGTKLYIYGASYDIEIYDAQTLAHEKTVDLGADSTGAGMIITQ
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40189; Mature: 40189
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLGLSIAALLAGTTVASASAQASTLFMGSYPDRMLIVDEASGKVTDTLTLASGLPTSM CCCCHHHHHHHHHCCHHCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCEE RISNDRKKIYVTTITTSGIEVIDTATKKVVNSFSLNTPTTRYRFNGGVPDPSGRYFYTML EECCCCCEEEEEEEECCCEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEH TKFEKLNDRYLVSPQQFAVIDLQKKAVVRTSEVPKEDDSNPNAGWRTNYMMSEDGKTLFV HHHHHCCCCEEECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEE IRDKVLVLDTADLKVKERIEVSRPEATGIEGVTFGGGVEALRNPHEYVSLFNATDPYIHN EECEEEEEEECCCEEEEHEEECCCCCCCCCEEEECCCHHHHCCCHHHEEEECCCCCCHHC KIFGVGRFNLATKAFDFRPIGPAPYGMAGLQVSPDLKQGWTVVTNGSVGNKRCEFWHLDL EEEEECEEEEEEEEECCEECCCCCCCCCCEEECCCHHCCCEEEECCCCCCCEEEEEEEEC TTNQVKNKAEFPCRSRFQFGMSGDGTKLYIYGASYDIEIYDAQTLAHEKTVDLGADSTGA CHHHHCCCCCCCCCCCEEECCCCCCCEEEEEECEEEEEEEECHHHCCCCEEECCCCCCCC GMIITQ EEEEEC >Mature Secondary Structure MKKLGLSIAALLAGTTVASASAQASTLFMGSYPDRMLIVDEASGKVTDTLTLASGLPTSM CCCCHHHHHHHHHCCHHCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCEE RISNDRKKIYVTTITTSGIEVIDTATKKVVNSFSLNTPTTRYRFNGGVPDPSGRYFYTML EECCCCCEEEEEEEECCCEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEH TKFEKLNDRYLVSPQQFAVIDLQKKAVVRTSEVPKEDDSNPNAGWRTNYMMSEDGKTLFV HHHHHCCCCEEECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEE IRDKVLVLDTADLKVKERIEVSRPEATGIEGVTFGGGVEALRNPHEYVSLFNATDPYIHN EECEEEEEEECCCEEEEHEEECCCCCCCCCEEEECCCHHHHCCCHHHEEEECCCCCCHHC KIFGVGRFNLATKAFDFRPIGPAPYGMAGLQVSPDLKQGWTVVTNGSVGNKRCEFWHLDL EEEEECEEEEEEEEECCEECCCCCCCCCCEEECCCHHCCCEEEECCCCCCCEEEEEEEEC TTNQVKNKAEFPCRSRFQFGMSGDGTKLYIYGASYDIEIYDAQTLAHEKTVDLGADSTGA CHHHHCCCCCCCCCCCEEECCCCCCCEEEEEECEEEEEEEECHHHCCCCEEECCCCCCCC GMIITQ EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA