Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201040

Identifier: 87201040

GI number: 87201040

Start: 3238746

End: 3240530

Strand: Direct

Name: 87201040

Synonym: Saro_3028

Alternate gene names: NA

Gene position: 3238746-3240530 (Clockwise)

Preceding gene: 87201038

Following gene: 87201041

Centisome position: 90.94

GC content: 66.78

Gene sequence:

>1785_bases
ATGAGCGTGGCCGATACCGATACCCGCGAATCCGCAAGCCCGCGCCTCGGGCGCCTTGCCCGCAGCCGCATTGTCCAGTT
CCTCGGGCTTTCCGCGCTTCCCGCCACGATCGCCCTTGCGCAAGCCGCGCGCGATCCTTCGAACCCGGTGGAGGCCGAAC
CCGGCATCCCCGTGAAGGACCAGCTCGTCGTCGAAAAATGTGGCTCGTGCCATACCGCAGATGCGAAGGGGAACCTTTCG
CGCATCTCCTGGGTGCGGACCACGCCCGAAGGCTGGGCACAGGTCATCCACCGCATGTCGCGCCTCAACGGCCTGTCGAT
CTCCCCGGTCGAGGCCAAGGCCGTGATCCGCTCGCTCTCCGCCACCCACGGGCTGGCCCCGGAAGAAGCCAAGCCGGTCA
TGTACCTGCCCGAGCATCGCCTGATCGACGAGACCAACATCCCGAACGAGACGATCCGGCAGTCTTGCGCATCGTGCCAC
GCCTTCGCGCAGCCCCTGTCCTGGCGCCGGTCGAAGGCGGAATGGAGCCTGCTGCGCAATCTCCACGTCGCGCTCTATTC
GCAGGCCGACGCGCAGTATCGCCGCGCCGTGGATGACCCGTCGCAGCCCGCTCCCGCGCCGGGCGCGACCAAGCCGCTGC
CGGTCGAAGTCGCGATGGACTACATGAACAAGCACGCGCCCCTCGCCACGCCCGAATGGTCGGCATGGCAGGCCCGCGTC
CAGTCGTCCAAGCTGGGCGGCCGTTGGCTGGTCAGCGCCTCGCTTCCCGGCAAGGGCAAGTACGTGGGCGAAATGGTGCT
CGCGCCGGCAGCGTCGGGCGATGACTATTCGACAACGATCTCGCTCAAGTCCCTCGCCGATGGCTCCACCCTGACCCGCA
AGGGCAAGGGGCTGGTCTATACCGGTTATGCCTGGCGCGGGACCTCCGCCAGTGGACCGGAAGGCGCCCGGCCCGATGCA
CCCGAAGACCACGAAACGCGCGAGACGATGTGGTTCTCGCCCGATCGCAAGTCTGCCGAAGGACGCTGGTTCTGGGGCGA
TTACAAGGAGTTCGGCTTCGACGTGAAGCTGACCCGCGCTTCGGCCGAACCAACCGTCACCGCCGTAATGCCCGGCGGGC
TCAAGATCGGCACCAAGGGTGCAACCGTGCGCCTCTATGGCGATGCGTTCCCCGCCGGCCTCAAGGCGGCGGACATCGAT
CTCGGCAAGGGCGTGATGGTCAGCAAGGTCGTGTCGGCCAGCCCGGGCGAGGCCGTTCTCACCGTCGACGTTGCTGCCGA
CGCCACGGTCGGCGCCCATGACGTTGGAATCGGCAGCAGCGTGCTGGCCGCCGCGCTGCCGGTCTATCGCAAGGTCGATT
ACCTCAAGGTCGCGCCGGATTCTGCCATCGCCCGCCTCGGCGGAAGCGAGAAGCACACGCCCGGCTACCAGCAGTTCGAG
GCCATCGGCTACGACAACGGCCTCGACGGCAAGCCCTACACTGCCGACGACGTCGCCATCGGCCCGGTGGACGCGAGCTG
GTCCATGGAAGAATTCCAGACCGTCTACTACGACGACGATACCAGCTACGTTGGCAAGCTCAGCGACAAGGCCCTGTTCA
CCCCGGCGATGGACGGCCCCAATCCCGCGCGCAAGTGGGGCCGCAACAACTATGGCGAGGTCTGGGTCGTCGCCACCGCC
AAGACGGAAAAGGACGCCCTGGGCAAGCCGTTGACGGCAAAATCCTTCATGGTTGTCTCGGTGCCCGCCTACAAGCGCTG
GGATCAGCCGGAGGTGGCCAAGTGA

Upstream 100 bases:

>100_bases
ACAAAGGCGTTGACCAACTTTTGACATCTGTCCAGTCTTTGCCTCGCAGCCACATCCGAATCGCACGATGCGGCACAGCC
ATCAGGGGGAAAACGCGACC

Downstream 100 bases:

>100_bases
CCACGGTCCTCGCCCCCCGCTATCGCCTTGGCGATATCCATACTTTCGAGGCTTCCGGCCAGGGCTTCGTCTATCTCGCA
TCGGCCGGCGCGATCTTCGC

Product: quinohemoprotein amine dehydrogenase, 60 kDa subunit

Products: NA

Alternate protein names: Quinohemoprotein Amine Dehydrogenase Alpha Subunit; Quinohemoprotein Amine Dehydrogenase Subunit Alpha

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MSVADTDTRESASPRLGRLARSRIVQFLGLSALPATIALAQAARDPSNPVEAEPGIPVKDQLVVEKCGSCHTADAKGNLS
RISWVRTTPEGWAQVIHRMSRLNGLSISPVEAKAVIRSLSATHGLAPEEAKPVMYLPEHRLIDETNIPNETIRQSCASCH
AFAQPLSWRRSKAEWSLLRNLHVALYSQADAQYRRAVDDPSQPAPAPGATKPLPVEVAMDYMNKHAPLATPEWSAWQARV
QSSKLGGRWLVSASLPGKGKYVGEMVLAPAASGDDYSTTISLKSLADGSTLTRKGKGLVYTGYAWRGTSASGPEGARPDA
PEDHETRETMWFSPDRKSAEGRWFWGDYKEFGFDVKLTRASAEPTVTAVMPGGLKIGTKGATVRLYGDAFPAGLKAADID
LGKGVMVSKVVSASPGEAVLTVDVAADATVGAHDVGIGSSVLAAALPVYRKVDYLKVAPDSAIARLGGSEKHTPGYQQFE
AIGYDNGLDGKPYTADDVAIGPVDASWSMEEFQTVYYDDDTSYVGKLSDKALFTPAMDGPNPARKWGRNNYGEVWVVATA
KTEKDALGKPLTAKSFMVVSVPAYKRWDQPEVAK

Sequences:

>Translated_594_residues
MSVADTDTRESASPRLGRLARSRIVQFLGLSALPATIALAQAARDPSNPVEAEPGIPVKDQLVVEKCGSCHTADAKGNLS
RISWVRTTPEGWAQVIHRMSRLNGLSISPVEAKAVIRSLSATHGLAPEEAKPVMYLPEHRLIDETNIPNETIRQSCASCH
AFAQPLSWRRSKAEWSLLRNLHVALYSQADAQYRRAVDDPSQPAPAPGATKPLPVEVAMDYMNKHAPLATPEWSAWQARV
QSSKLGGRWLVSASLPGKGKYVGEMVLAPAASGDDYSTTISLKSLADGSTLTRKGKGLVYTGYAWRGTSASGPEGARPDA
PEDHETRETMWFSPDRKSAEGRWFWGDYKEFGFDVKLTRASAEPTVTAVMPGGLKIGTKGATVRLYGDAFPAGLKAADID
LGKGVMVSKVVSASPGEAVLTVDVAADATVGAHDVGIGSSVLAAALPVYRKVDYLKVAPDSAIARLGGSEKHTPGYQQFE
AIGYDNGLDGKPYTADDVAIGPVDASWSMEEFQTVYYDDDTSYVGKLSDKALFTPAMDGPNPARKWGRNNYGEVWVVATA
KTEKDALGKPLTAKSFMVVSVPAYKRWDQPEVAK
>Mature_593_residues
SVADTDTRESASPRLGRLARSRIVQFLGLSALPATIALAQAARDPSNPVEAEPGIPVKDQLVVEKCGSCHTADAKGNLSR
ISWVRTTPEGWAQVIHRMSRLNGLSISPVEAKAVIRSLSATHGLAPEEAKPVMYLPEHRLIDETNIPNETIRQSCASCHA
FAQPLSWRRSKAEWSLLRNLHVALYSQADAQYRRAVDDPSQPAPAPGATKPLPVEVAMDYMNKHAPLATPEWSAWQARVQ
SSKLGGRWLVSASLPGKGKYVGEMVLAPAASGDDYSTTISLKSLADGSTLTRKGKGLVYTGYAWRGTSASGPEGARPDAP
EDHETRETMWFSPDRKSAEGRWFWGDYKEFGFDVKLTRASAEPTVTAVMPGGLKIGTKGATVRLYGDAFPAGLKAADIDL
GKGVMVSKVVSASPGEAVLTVDVAADATVGAHDVGIGSSVLAAALPVYRKVDYLKVAPDSAIARLGGSEKHTPGYQQFEA
IGYDNGLDGKPYTADDVAIGPVDASWSMEEFQTVYYDDDTSYVGKLSDKALFTPAMDGPNPARKWGRNNYGEVWVVATAK
TEKDALGKPLTAKSFMVVSVPAYKRWDQPEVAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63829; Mature: 63698

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVADTDTRESASPRLGRLARSRIVQFLGLSALPATIALAQAARDPSNPVEAEPGIPVKD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
QLVVEKCGSCHTADAKGNLSRISWVRTTPEGWAQVIHRMSRLNGLSISPVEAKAVIRSLS
HHHHHHCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ATHGLAPEEAKPVMYLPEHRLIDETNIPNETIRQSCASCHAFAQPLSWRRSKAEWSLLRN
HHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHVALYSQADAQYRRAVDDPSQPAPAPGATKPLPVEVAMDYMNKHAPLATPEWSAWQARV
HHHEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
QSSKLGGRWLVSASLPGKGKYVGEMVLAPAASGDDYSTTISLKSLADGSTLTRKGKGLVY
HHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEHHCCCCCCEEECCCCEEE
TGYAWRGTSASGPEGARPDAPEDHETRETMWFSPDRKSAEGRWFWGDYKEFGFDVKLTRA
ECEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCHHHCCCEEEEEEC
SAEPTVTAVMPGGLKIGTKGATVRLYGDAFPAGLKAADIDLGKGVMVSKVVSASPGEAVL
CCCCEEEEEECCCEEECCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHCCCCCCEEE
TVDVAADATVGAHDVGIGSSVLAAALPVYRKVDYLKVAPDSAIARLGGSEKHTPGYQQFE
EEEECCCCCCCCHHCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCCHHHHH
AIGYDNGLDGKPYTADDVAIGPVDASWSMEEFQTVYYDDDTSYVGKLSDKALFTPAMDGP
HCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCEEEEECCCCHHHHCCCCCEEECCCCCCC
NPARKWGRNNYGEVWVVATAKTEKDALGKPLTAKSFMVVSVPAYKRWDQPEVAK
CHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SVADTDTRESASPRLGRLARSRIVQFLGLSALPATIALAQAARDPSNPVEAEPGIPVKD
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
QLVVEKCGSCHTADAKGNLSRISWVRTTPEGWAQVIHRMSRLNGLSISPVEAKAVIRSLS
HHHHHHCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ATHGLAPEEAKPVMYLPEHRLIDETNIPNETIRQSCASCHAFAQPLSWRRSKAEWSLLRN
HHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHVALYSQADAQYRRAVDDPSQPAPAPGATKPLPVEVAMDYMNKHAPLATPEWSAWQARV
HHHEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
QSSKLGGRWLVSASLPGKGKYVGEMVLAPAASGDDYSTTISLKSLADGSTLTRKGKGLVY
HHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEHHCCCCCCEEECCCCEEE
TGYAWRGTSASGPEGARPDAPEDHETRETMWFSPDRKSAEGRWFWGDYKEFGFDVKLTRA
ECEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCHHHCCCEEEEEEC
SAEPTVTAVMPGGLKIGTKGATVRLYGDAFPAGLKAADIDLGKGVMVSKVVSASPGEAVL
CCCCEEEEEECCCEEECCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHCCCCCCEEE
TVDVAADATVGAHDVGIGSSVLAAALPVYRKVDYLKVAPDSAIARLGGSEKHTPGYQQFE
EEEECCCCCCCCHHCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCCHHHHH
AIGYDNGLDGKPYTADDVAIGPVDASWSMEEFQTVYYDDDTSYVGKLSDKALFTPAMDGP
HCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCEEEEECCCCHHHHCCCCCEEECCCCCCC
NPARKWGRNNYGEVWVVATAKTEKDALGKPLTAKSFMVVSVPAYKRWDQPEVAK
CHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA