Click here to switch to the map view.

The map label for this gene is 87201038

Identifier: 87201038

GI number: 87201038

Start: 3235845

End: 3237056

Strand: Direct

Name: 87201038

Synonym: Saro_3026

Alternate gene names: NA

Gene position: 3235845-3237056 (Clockwise)

Preceding gene: 87201037

Following gene: 87201040

Centisome position: 90.85

GC content: 58.83

Gene sequence:

>1212_bases
ATGCCGAGAACGAAGCGCTCGAAGCCGCTCTATCAGCGCGGCCCCTTCGCCCTCTATCGCCGCCCCGATCGCACGAACCT
CGAAATCGTCTGGTACGATGCCGAGCGCAAGCGTGAACGATGCATTAGCGCGGGCACAAGCGATGTTGGGGAAGGCAGCA
AGGCCCTAGATCGCTGCTACCTCAAGGAGCAGGGAAACCACGTCTGCCCCAACTGCGGCAGAGCGATGGAAGGCGAAGCT
GCGCCCTTACTGGCAAGTGCCATCACTGACTATCTGACCATTTCCGAAGGAAAGGCTGGATATAAGGCATCTAAGACCCG
GCTTTCACATGTCGTTGGATACCTTGCAGCAACCAATCCCGCCGTCACCCTACCCATGATTTCGCGGGATTGGGTAGAAG
GTTTCCGGAAGTGGATGCGCGGTAAAGATTACGCCCCCGGCCATATCGAGGGATGCGTTCTGCAACTCGCCGCAGCGATC
AATTCGGTCCATGGCCATCAGGCGCAATTCAAAGCCCGCTCCGTAAAGGACGCGGCCCGCTCTCCAGTTTATCGGGCAAG
CGTTGAGGAGCTTGCGGCCATGTTCCGCTTCTGTATCGATCCGCCCGCGCCCAAAGGTAGGCAGTGGAGCGACAAGGAGC
GCGCCATGGTCATCGCCACCCGCGAGAACCTTTTGCGGTATCTGCGAGCTGCTGTCGCAACATGGGCGCGGCCAGACGCG
ATCTTTGATCTCAAGGCCAAGGGGCAATGGCATAGCGCGGCAGGGGTTCTTGATCTGAACCAGCCAGGCCGACCGCAAAC
CAAAAAGTACCGCCCCATCATACCAGTCGCGCGGCAGTTTCGGCCTTGGCTTGATGAAGCGCTTGCCCGCGAAAGCTACA
TCCCCGTCAGCACTGTGCGTCATGGATGGGCGTCAATGCGGATGCACCTTAAGTTACCGACAGGGCGCGAGGCAGGCGAA
AAGCTTATCCGCAGGAGCATGGCAACCATATGTCGCAAGCTCATCGGAGAGGCGAATTGGGCGCAGGGCGAAATGATGCT
CGGGCACCGGAAATCGAGCATTTCCGACATTTACGCCATTGTTGATCCCGCGAATCTCGGCCTCGCTCTGGAGGCCACAG
AAACGGTTATTGACCGTATCGAAGCCTTGACGCCGGGTGCGTTTTGCCGCACTCTTACCGCAGAAGCCTCCCCGCTTCGA
GTTGTGAAATGA

Upstream 100 bases:

>100_bases
GACGATCAGTCCAGTTGTCTCCTGATGAACTCGACTGGATTGTCGATTGTGGCGCATGGGATGCCATCGCCAATGCTGTC
CTAGATTACCAGAGGAACCA

Downstream 100 bases:

>100_bases
GCCGGAAAGTGGCTGATTTCTGCGCTGGAGCGGGTGAAGGGAATCGAACCCTCGTCGTAAGCTTGGGAAGCTTCTGCTCT
ACCATTGAGCTACACCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MPRTKRSKPLYQRGPFALYRRPDRTNLEIVWYDAERKRERCISAGTSDVGEGSKALDRCYLKEQGNHVCPNCGRAMEGEA
APLLASAITDYLTISEGKAGYKASKTRLSHVVGYLAATNPAVTLPMISRDWVEGFRKWMRGKDYAPGHIEGCVLQLAAAI
NSVHGHQAQFKARSVKDAARSPVYRASVEELAAMFRFCIDPPAPKGRQWSDKERAMVIATRENLLRYLRAAVATWARPDA
IFDLKAKGQWHSAAGVLDLNQPGRPQTKKYRPIIPVARQFRPWLDEALARESYIPVSTVRHGWASMRMHLKLPTGREAGE
KLIRRSMATICRKLIGEANWAQGEMMLGHRKSSISDIYAIVDPANLGLALEATETVIDRIEALTPGAFCRTLTAEASPLR
VVK

Sequences:

>Translated_403_residues
MPRTKRSKPLYQRGPFALYRRPDRTNLEIVWYDAERKRERCISAGTSDVGEGSKALDRCYLKEQGNHVCPNCGRAMEGEA
APLLASAITDYLTISEGKAGYKASKTRLSHVVGYLAATNPAVTLPMISRDWVEGFRKWMRGKDYAPGHIEGCVLQLAAAI
NSVHGHQAQFKARSVKDAARSPVYRASVEELAAMFRFCIDPPAPKGRQWSDKERAMVIATRENLLRYLRAAVATWARPDA
IFDLKAKGQWHSAAGVLDLNQPGRPQTKKYRPIIPVARQFRPWLDEALARESYIPVSTVRHGWASMRMHLKLPTGREAGE
KLIRRSMATICRKLIGEANWAQGEMMLGHRKSSISDIYAIVDPANLGLALEATETVIDRIEALTPGAFCRTLTAEASPLR
VVK
>Mature_402_residues
PRTKRSKPLYQRGPFALYRRPDRTNLEIVWYDAERKRERCISAGTSDVGEGSKALDRCYLKEQGNHVCPNCGRAMEGEAA
PLLASAITDYLTISEGKAGYKASKTRLSHVVGYLAATNPAVTLPMISRDWVEGFRKWMRGKDYAPGHIEGCVLQLAAAIN
SVHGHQAQFKARSVKDAARSPVYRASVEELAAMFRFCIDPPAPKGRQWSDKERAMVIATRENLLRYLRAAVATWARPDAI
FDLKAKGQWHSAAGVLDLNQPGRPQTKKYRPIIPVARQFRPWLDEALARESYIPVSTVRHGWASMRMHLKLPTGREAGEK
LIRRSMATICRKLIGEANWAQGEMMLGHRKSSISDIYAIVDPANLGLALEATETVIDRIEALTPGAFCRTLTAEASPLRV
VK

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44965; Mature: 44834

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTKRSKPLYQRGPFALYRRPDRTNLEIVWYDAERKRERCISAGTSDVGEGSKALDRCY
CCCCCCCCCCHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHH
LKEQGNHVCPNCGRAMEGEAAPLLASAITDYLTISEGKAGYKASKTRLSHVVGYLAATNP
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCC
AVTLPMISRDWVEGFRKWMRGKDYAPGHIEGCVLQLAAAINSVHGHQAQFKARSVKDAAR
CEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SPVYRASVEELAAMFRFCIDPPAPKGRQWSDKERAMVIATRENLLRYLRAAVATWARPDA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCC
IFDLKAKGQWHSAAGVLDLNQPGRPQTKKYRPIIPVARQFRPWLDEALARESYIPVSTVR
EEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
HGWASMRMHLKLPTGREAGEKLIRRSMATICRKLIGEANWAQGEMMLGHRKSSISDIYAI
HHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHEEEE
VDPANLGLALEATETVIDRIEALTPGAFCRTLTAEASPLRVVK
ECCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PRTKRSKPLYQRGPFALYRRPDRTNLEIVWYDAERKRERCISAGTSDVGEGSKALDRCY
CCCCCCCCCHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHH
LKEQGNHVCPNCGRAMEGEAAPLLASAITDYLTISEGKAGYKASKTRLSHVVGYLAATNP
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCC
AVTLPMISRDWVEGFRKWMRGKDYAPGHIEGCVLQLAAAINSVHGHQAQFKARSVKDAAR
CEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SPVYRASVEELAAMFRFCIDPPAPKGRQWSDKERAMVIATRENLLRYLRAAVATWARPDA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCC
IFDLKAKGQWHSAAGVLDLNQPGRPQTKKYRPIIPVARQFRPWLDEALARESYIPVSTVR
EEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
HGWASMRMHLKLPTGREAGEKLIRRSMATICRKLIGEANWAQGEMMLGHRKSSISDIYAI
HHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHEEEE
VDPANLGLALEATETVIDRIEALTPGAFCRTLTAEASPLRVVK
ECCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA