| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201037
Identifier: 87201037
GI number: 87201037
Start: 3235080
End: 3235526
Strand: Direct
Name: 87201037
Synonym: Saro_3025
Alternate gene names: NA
Gene position: 3235080-3235526 (Clockwise)
Preceding gene: 87201036
Following gene: 87201038
Centisome position: 90.83
GC content: 60.4
Gene sequence:
>447_bases ATGGGGCATCGACCTGCTGGCAGTGGCGATGCGGCTTTGGGACGAGAGCGAGCAACTGGAAAGGAAGGCGGCATGAGCGA CGGCTACCAGCTTGTCCTAGGCCGCACCCGCGAGACGGCGCATCGGATTGTCGATGCTGCCCCGGTTGGTTCAAGGCTCT CGGTAAAGCCGCCACGGCGCACGCTCGACCAGAACGCGCTTATGTGGACGCTTCTAGGCGAACTGGCAGCGGCAAGACCG GAAGGCCGAGAGCTAACGCCGGACGTGTGGAAGTCGCTTTTCCTTCACGCCCTCGATCACTCGCAGCGCTTTGAAATGGC CCTTGATGGCAAGGGGATGGTCCCGGTTGGGTTCCGTTCCAGCAAGCTATCGAAGGAGCAAATGAGCGCGCTGATTGAGA CGATTTACGAATACGCCGGAAGGCATGGAGTGGAGTTTAGCCAGTGA
Upstream 100 bases:
>100_bases AGCTCGTCGTTCCCTTGGCTCCGGAATACCACCTGATCCAGCACGATCCGTTTCAGACGCTTTCCGTGGAAGCCTTGGGG CATCGCGGGTTCTTCGAGGA
Downstream 100 bases:
>100_bases CCAGCCAAACCCAACACATACCCCCTGACGAATGGCGCACTCTCATCCTTGAGACAAACGAAAGCCGCCTGTTCCGGAAC ATCACCCAGGAAGCATACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MGHRPAGSGDAALGRERATGKEGGMSDGYQLVLGRTRETAHRIVDAAPVGSRLSVKPPRRTLDQNALMWTLLGELAAARP EGRELTPDVWKSLFLHALDHSQRFEMALDGKGMVPVGFRSSKLSKEQMSALIETIYEYAGRHGVEFSQ
Sequences:
>Translated_148_residues MGHRPAGSGDAALGRERATGKEGGMSDGYQLVLGRTRETAHRIVDAAPVGSRLSVKPPRRTLDQNALMWTLLGELAAARP EGRELTPDVWKSLFLHALDHSQRFEMALDGKGMVPVGFRSSKLSKEQMSALIETIYEYAGRHGVEFSQ >Mature_147_residues GHRPAGSGDAALGRERATGKEGGMSDGYQLVLGRTRETAHRIVDAAPVGSRLSVKPPRRTLDQNALMWTLLGELAAARPE GRELTPDVWKSLFLHALDHSQRFEMALDGKGMVPVGFRSSKLSKEQMSALIETIYEYAGRHGVEFSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16203; Mature: 16071
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHRPAGSGDAALGRERATGKEGGMSDGYQLVLGRTRETAHRIVDAAPVGSRLSVKPPRR CCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHH TLDQNALMWTLLGELAAARPEGRELTPDVWKSLFLHALDHSQRFEMALDGKGMVPVGFRS HHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC SKLSKEQMSALIETIYEYAGRHGVEFSQ HHCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GHRPAGSGDAALGRERATGKEGGMSDGYQLVLGRTRETAHRIVDAAPVGSRLSVKPPRR CCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHH TLDQNALMWTLLGELAAARPEGRELTPDVWKSLFLHALDHSQRFEMALDGKGMVPVGFRS HHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC SKLSKEQMSALIETIYEYAGRHGVEFSQ HHCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA