Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201010

Identifier: 87201010

GI number: 87201010

Start: 3215596

End: 3216036

Strand: Reverse

Name: 87201010

Synonym: Saro_2998

Alternate gene names: NA

Gene position: 3216036-3215596 (Counterclockwise)

Preceding gene: 87201011

Following gene: 87201009

Centisome position: 90.3

GC content: 63.49

Gene sequence:

>441_bases
ATGACCGATATTCCGATCCCCGCAGGCCCGACCAACAAAGAGCTTGTTGACCTCGCCTATCTGGCTCTCGGCATGACCGA
CACGATGTTCGGGCGCACGGAGGAGGAATACGCTTCGGGCGTCGGGCTCCTGCGCGCCATGATGGGGGAATGGCCCTTTG
ACCAGTTGGGCTATGACTACACCACCCCGCGTCCTTCGGAGCGTTCCGGGATAGAGCAGAAATGGACGCAGGCCGTCAGC
CTGTCGCTTGCCGAGCGCATTGCCCCGGCAGTCGGCAAGGCTCTCTCCCCGCAGTCTGCATCGGCCAAGGCTCGGTCCTA
TTCAACGCTCTGCGCTGCGGTGGGCAACAAGTCCACCGTCACCTATCCGAACAACACGCCCGCTGGCGCTGGTCAGGGCC
GCTCATTGGGCTTCGGCGCGTTCTTCCGGGACGGTGACTGA

Upstream 100 bases:

>100_bases
GTCGCAACCAGGCGCTTTGCTGGGGGCAGGGCCTTAGCGGTGCCGAGCAACTGGCGCTCTACAACGCGCTTGCAACCTAC
ATGACGGCAGTGGGGGCATA

Downstream 100 bases:

>100_bases
TGCAGGTTCCCGTCCTCTCGGGGATGACCGCCCGCGAGGGTTCGTTCGCGGCATCCTTCCCGATCAACCTTGAGCCTCGC
ACGTTCACAAGCGGTGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTDIPIPAGPTNKELVDLAYLALGMTDTMFGRTEEEYASGVGLLRAMMGEWPFDQLGYDYTTPRPSERSGIEQKWTQAVS
LSLAERIAPAVGKALSPQSASAKARSYSTLCAAVGNKSTVTYPNNTPAGAGQGRSLGFGAFFRDGD

Sequences:

>Translated_146_residues
MTDIPIPAGPTNKELVDLAYLALGMTDTMFGRTEEEYASGVGLLRAMMGEWPFDQLGYDYTTPRPSERSGIEQKWTQAVS
LSLAERIAPAVGKALSPQSASAKARSYSTLCAAVGNKSTVTYPNNTPAGAGQGRSLGFGAFFRDGD
>Mature_145_residues
TDIPIPAGPTNKELVDLAYLALGMTDTMFGRTEEEYASGVGLLRAMMGEWPFDQLGYDYTTPRPSERSGIEQKWTQAVSL
SLAERIAPAVGKALSPQSASAKARSYSTLCAAVGNKSTVTYPNNTPAGAGQGRSLGFGAFFRDGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15518; Mature: 15386

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIPIPAGPTNKELVDLAYLALGMTDTMFGRTEEEYASGVGLLRAMMGEWPFDQLGYDY
CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCCCCC
TTPRPSERSGIEQKWTQAVSLSLAERIAPAVGKALSPQSASAKARSYSTLCAAVGNKSTV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEE
TYPNNTPAGAGQGRSLGFGAFFRDGD
ECCCCCCCCCCCCCCCCCCCEECCCC
>Mature Secondary Structure 
TDIPIPAGPTNKELVDLAYLALGMTDTMFGRTEEEYASGVGLLRAMMGEWPFDQLGYDY
CCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCCCCC
TTPRPSERSGIEQKWTQAVSLSLAERIAPAVGKALSPQSASAKARSYSTLCAAVGNKSTV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEE
TYPNNTPAGAGQGRSLGFGAFFRDGD
ECCCCCCCCCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA